DY258034

Overview
NameDY258034
Unique NameDY258034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length489
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PSEAB (Gamma-glutamyl phosphate reductase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=proA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.498e-18
Identity = 42/74 (56.76%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D I+ E+   A  FL +VDSA+V  NASTRF DG  +GLGAE+GIST ++HARGPVG+EGL + ++++ G+GHV
Sbjct:  346 DAIITENFSDARRFLAEVDSASVMVNASTRFADGFEYGLGAEIGISTDKLHARGPVGLEGLTSEKYVVFGDGHV 419          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PSEA8 (Gamma-glutamyl phosphate reductase OS=Pseudomonas aeruginosa (strain LESB58) GN=proA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.498e-18
Identity = 42/74 (56.76%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D I+ E+   A  FL +VDSA+V  NASTRF DG  +GLGAE+GIST ++HARGPVG+EGL + ++++ G+GHV
Sbjct:  346 DAIITENFSDARRFLAEVDSASVMVNASTRFADGFEYGLGAEIGISTDKLHARGPVGLEGLTSEKYVVFGDGHV 419          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PSEA7 (Gamma-glutamyl phosphate reductase OS=Pseudomonas aeruginosa (strain PA7) GN=proA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.498e-18
Identity = 42/74 (56.76%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D I+ E+   A  FL +VDSA+V  NASTRF DG  +GLGAE+GIST ++HARGPVG+EGL + ++++ G+GHV
Sbjct:  346 DAIITENFSDARRFLAEVDSASVMVNASTRFADGFEYGLGAEIGISTDKLHARGPVGLEGLTSEKYVVFGDGHV 419          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_POLSJ (Gamma-glutamyl phosphate reductase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=proA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.498e-18
Identity = 43/74 (58.11%), Postives = 55/74 (74.32%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D I+  D   A+ FL +VDSA+V  NASTRF DG  FGLGAE+GIST + HARGPVG+EGL + ++++ GNG V
Sbjct:  361 DAILTRDHMHAQRFLREVDSASVMVNASTRFADGFEFGLGAEIGISTDKFHARGPVGIEGLTSLKYVVLGNGEV 434          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_METMA (Gamma-glutamyl phosphate reductase OS=Methanosarcina mazei GN=proA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.498e-18
Identity = 49/94 (52.13%), Postives = 64/94 (68.09%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV---DGDQGVVYTHKNLALQ 273
            D I+ E+    + F+  VDS++V  NASTRF DG R+G GAEVGIST++IH+RGPVG+EGLL  ++IL G G VV    G     YTH+ L L+
Sbjct:  349 DGIITENASRRKEFIGLVDSSSVMVNASTRFADGYRYGKGAEVGISTNKIHSRGPVGMEGLLIYKYILMGKGQVVADYAGKNAKPYTHRKLDLK 442          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_CHRVO (Gamma-glutamyl phosphate reductase OS=Chromobacterium violaceum GN=proA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.498e-18
Identity = 44/74 (59.46%), Postives = 55/74 (74.32%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV ED   +  FL +VDSA+V  NASTRF DG  +GLGAE+GIST +IHARGPVG+ GL + +WI+ G+G V
Sbjct:  344 DAIVTEDYGRSRRFLREVDSASVMVNASTRFADGFEYGLGAEIGISTDKIHARGPVGLNGLTSQKWIVLGDGQV 417          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_ACIAD (Gamma-glutamyl phosphate reductase OS=Acinetobacter sp. (strain ADP1) GN=proA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.498e-18
Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV E+      FL +VDS++V  NASTRF DG  +GLGAE+GIST +IHARGPVG+EGL + +WI+ G+G +
Sbjct:  346 DAIVTENYSKVRKFLAEVDSSSVMINASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWIVFGDGQI 419          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA2_BACLD (Gamma-glutamyl phosphate reductase 2 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=proA2 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.498e-18
Identity = 39/74 (52.70%), Postives = 58/74 (78.38%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            + I+ E+ + A+ FL  VD+AA++HNASTRF DG   G GAE+GIST ++HARGP+G++ L T ++I+RG+GH+
Sbjct:  348 EAIITENPETAKAFLNTVDAAALYHNASTRFTDGGALGFGAEIGISTQKLHARGPMGLKELTTCKYIMRGDGHI 421          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_SYNR3 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain RCC307) GN=proA PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.957e-18
Identity = 48/92 (52.17%), Postives = 63/92 (68.48%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV-VDGDQGV-VYTHKNLAL 270
            + I   + + AE FL +VDSA V+ N S+RF DG R+G GAEVGIST  +  RGPVG+EGL+T R+ LRG+GH+  D   G   +TH+NL L
Sbjct:  354 EVICTTNTETAERFLARVDSAGVYQNCSSRFADGFRYGFGAEVGISTQTLPPRGPVGLEGLVTYRYRLRGDGHIAADYASGARQFTHQNLPL 445          
BLAST of DY258034 vs. ExPASy Swiss-Prot
Match: PROA_PSEU5 (Gamma-glutamyl phosphate reductase OS=Pseudomonas stutzeri (strain A1501) GN=proA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.957e-18
Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 1
Query:    1 DCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 222
            D IV E+   A  FL +VDSA+V  NASTRF DG  +GLGAE+GIST ++HARGPVG+EGL + ++++ G+GHV
Sbjct:  346 DAIVTENFTDARRFLTEVDSASVMINASTRFADGFEYGLGAEIGISTDKLHARGPVGLEGLTSEKYVVFGDGHV 419          
The following BLAST results are available for this feature:
BLAST of DY258034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_PSEAB1.498e-1856.76Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]
PROA_PSEA81.498e-1856.76Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]
PROA_PSEA71.498e-1856.76Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]
PROA_POLSJ1.498e-1858.11Gamma-glutamyl phosphate reductase OS=Polaromonas ... [more]
PROA_METMA1.498e-1852.13Gamma-glutamyl phosphate reductase OS=Methanosarci... [more]
PROA_CHRVO1.498e-1859.46Gamma-glutamyl phosphate reductase OS=Chromobacter... [more]
PROA_ACIAD1.498e-1856.76Gamma-glutamyl phosphate reductase OS=Acinetobacte... [more]
PROA2_BACLD1.498e-1852.70Gamma-glutamyl phosphate reductase 2 OS=Bacillus l... [more]
PROA_SYNR31.957e-1852.17Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_PSEU51.957e-1858.11Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAB2CH07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258034 ID=DY258034; Name=DY258034; organism=Citrus clementina; type=EST; length=489bp
GATTGCATTGTTGCAGAAGATCAAAAAGTTGCTGAAACATTTTTATGTCA
AGTTGACAGTGCTGCAGTATTTCATAATGCGAGTACACGATTCTGTGATG
GAGCACGATTTGGACTTGGTGCAGAGGTTGGAATAAGCACAAGCAGGATT
CATGCTCGCGGTCCAGTCGGAGTTGAAGGATTGCTAACTACTCGATGGAT
ATTGAGAGGGAATGGACACGTCGTAGATGGTGATCAAGGAGTCGTCTATA
CCCACAAGAATCTTGCCTTGCAATCCTAGTAACTTATGGTTCTAAACCAT
GTCATTTGTATAATATTATGCTAGCTGCTTCTGAGACTCTATTTACTTGG
TGTATATTTATTGCACTTTGCTGATGTTATTTATTAAGATCTTTAGTTTT
ATTACTTGGATCTTGCTTGGGGTAGAGCCTCATGTAATAGAAAGTTTCCT
CAAGTCAATAATGAAGTTCAGAATTTGAATTGAAAAAAA
back to top