DY258036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_STAAW (Pseudouridine-5'-phosphate glycosidase OS=Staphylococcus aureus (strain MW2) GN=psuG PE=3 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 2.553e-68 Identity = 140/252 (55.56%), Postives = 175/252 (69.44%), Query Frame = 1 Query: 118 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 ++ S EV +AL + +VALESTIISHGMPYPQN E A VE I+RNNGA+PATIAI++G +GL +E+LE LA A K +RRD+A VVA + GATTV+ TM A+M GI FVTGGIGGVH+ EHTMDIS+DL+EL +T V V+ AG KSILD+P+T+EYLET GV V Y+TNE PAFFT SG K+ V++PE A + +L L GIV+ PIP EHA IE+ I A+ EA + Sbjct: 8 IEYSREVQQALENNQPIVALESTIISHGMPYPQNVEMATTVEQIIRNNGAIPATIAIIDGKIKIGLESEDLEILATSKDVA-KVSRRDLAEVVAMKCVGATTVATTMICAAMAGIQFFVTGGIGGVHKGAEHTMDISADLEELSKTNVTVICAGAKSILDLPKTMEYLETKGVPVIGYQTNELPAFFTRESGVKLTSSVETPERLADIHLTKQQLNLEGGIVVANPIPYEHALSKAYIEAIINEAVVEAENQ 258
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_BREBN (Pseudouridine-5'-phosphate glycosidase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=psuG PE=3 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 2.823e-67 Identity = 137/254 (53.94%), Postives = 172/254 (67.72%), Query Frame = 1 Query: 109 KNLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREARE 870 K + + EV AL + VVALE+TIISHGMPYPQN E AKEVE I+R+NGAVPATI I++G +GL+ ELE A K +RRD A+++A+ GATTV+ATM A M GI +F TGGIGGVHR GE T D+S+DL EL +T VAVV AG KSILDI RTLEYLET GV V Y+T+EFP+FF SG V R+D+PE+ ++++ L L G++I P+P A IE+ IQ AL EA+E Sbjct: 2 KQYLTFTEEVRHALENNLPVVALETTIISHGMPYPQNIEMAKEVEQIIRDNGAVPATIGIMDGKIKIGLTDSELEEFAT-NKNVAKVSRRDFAYILASGKIGATTVAATMIAAEMAGIHMFATGGIGGVHREGEITWDVSADLTELAQTDVAVVCAGAKSILDIGRTLEYLETQGVPVVGYRTDEFPSFFARKSGFGVDMRIDTPEEVGKMMNTKWDLGLKGGMIIANPVPESDALNHEEIEAVIQKALAEAKE 254
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG2_RHIL3 (Pseudouridine-5'-phosphate glycosidase 2 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=psuG2 PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 4.126e-67 Identity = 131/251 (52.19%), Postives = 171/251 (68.13%), Query Frame = 1 Query: 121 KISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 ++S E++EA++ G VVALESTII+HGMPYP N ETA VE ++R NGA+PATIA+++G VGL +ELE LA+ K + RD+A + + TTVSATM A + GI VF TGG+GGVHR E T DIS+DL ELGRT AVV AG+KSILDI +TLEYLET V V AY T +FPAFFT SG K R+D+PE+ A+ + ++ +L G+G++I PIP A I+ I A+R+A E+ Sbjct: 7 RLSREMAEAIAAGSPVVALESTIITHGMPYPANLETALGVETVIRENGAIPATIAVVKGELRVGLEHDELEELAQ-SKGIVKASGRDLAVAMIRGQSAGTTVSATMLMADLAGIDVFATGGVGGVHRGAEQTFDISADLTELGRTKTAVVCAGVKSILDIAKTLEYLETQRVPVIAYGTEDFPAFFTRRSGFKADHRLDTPEEIAKAMWLHHQLGTGTGLLIANPIPEASALAPDFIDGTIADAVRDADER 256 HSP 2 Score: 32.7278 bits (73), Expect = 4.126e-67 Identity = 17/28 (60.71%), Postives = 19/28 (67.86%), Query Frame = 3 Query: 894 TPFLLARVNDLTGGFSLPQTFAL*KINA 977 TPFLLAR+N+LT G SL L K NA Sbjct: 264 TPFLLARINELTKGESLKANIELVKNNA 291
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_RALEJ (Pseudouridine-5'-phosphate glycosidase OS=Ralstonia eutropha (strain JMP134) GN=psuG PE=3 SV=2) HSP 1 Score: 231.876 bits (590), Expect = 2.645e-66 Identity = 129/255 (50.59%), Postives = 167/255 (65.49%), Query Frame = 1 Query: 103 LAKNLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAR 867 LA++ + +S V+ A + G +VALESTII+HGMPYP+N TA EVEA++ GA PATIA+++G VGLS +ELERL + G KA K +RRD+ V+ + GATTV+ TM A++ GI VFVTGGIGGVHR + T DIS+DL+EL RT VAVV AG KSILDI TLEYLET GV V + F AF+ SG + R+D P + AR I L L G+++ P+P A I++ Q AL EA+ Sbjct: 5 LAQSWLTLSAPVAAARAAGRPLVALESTIIAHGMPYPENVRTAHEVEALILELGAEPATIALIDGRIRVGLSDDELERLGRSG-KAHKVSRRDLPAVLTSGELGATTVAGTMICAALAGIEVFVTGGIGGVHRGAQETFDISADLQELARTSVAVVCAGAKSILDIGLTLEYLETQGVPVLTCEQENFAAFYKRDSGFRADYRLDDPAEQARFIRTKWDLGLAGGVLLSTPVPEAAAMASEEIDALTQQALDEAQ 258 HSP 2 Score: 40.817 bits (94), Expect = 2.645e-66 Identity = 22/36 (61.11%), Postives = 24/36 (66.67%), Query Frame = 3 Query: 870 EDITGNAETPFLLARVNDLTGGFSLPQTFAL*KINA 977 + ITG A TPFLLAR+ LTGG SL AL K NA Sbjct: 260 QGITGKAVTPFLLARIKALTGGRSLATNIALVKHNA 295
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_PETMO (Pseudouridine-5'-phosphate glycosidase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=psuG PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 3.450e-66 Identity = 130/252 (51.59%), Postives = 170/252 (67.46%), Query Frame = 1 Query: 118 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 ++I EV +AL +VALESTIISHGMPYPQN E AK VE +R GAVPATIAI++G VGLS EELE +A K +R D+ ++A N ATTV+ATM A + GI VFVTGGIGGVHR + T DIS+DL+EL +T VAV+SAG K+ILD+ T EYLET GV V Y+T+E P FF+ SG VP RV++P++ A ++ L L GI I PIP+E++ I+ I++A+ EA+++ Sbjct: 7 LEIKEEVYQALKENRPIVALESTIISHGMPYPQNVEVAKNVEETIRERGAVPATIAIIDGKMKVGLSKEELEFMAT-SKNILKASRMDLPVILAKGFNAATTVAATMIIAELAGIKVFVTGGIGGVHRNAQETFDISADLQELAKTNVAVISAGPKAILDLQLTKEYLETFGVPVIGYQTDELPCFFSRESGINVPYRVETPKEIASIMKTKWDLGLQGGIFIANPIPKEYSLDFEEIDKTIENAIEEAKKR 257 HSP 2 Score: 29.6462 bits (65), Expect = 3.450e-66 Identity = 16/34 (47.06%), Postives = 20/34 (58.82%), Query Frame = 3 Query: 876 ITGNAETPFLLARVNDLTGGFSLPQTFAL*KINA 977 I G TPFLL+++N+LT G SL L NA Sbjct: 259 IKGKELTPFLLSKINELTKGESLKANIELVYNNA 292
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_NOCSJ (Pseudouridine-5'-phosphate glycosidase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=psuG PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 9.976e-66 Identity = 130/249 (52.21%), Postives = 167/249 (67.07%), Query Frame = 1 Query: 115 LVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALRE 861 L+ ++ EV++AL G VVALESTIISHGMPYPQN A EVE I+R GAVPATIA+LEG P +GL+ ++LE LA K + RD+ VVA R +GATTV+ATM A++ GI VFVTGG+GGVHR + + D S+DL ELG T VAV+SAG+KSILDI TLE LET GV V AY ++EFP+F++ +SG P RVDS + A ++ L + G+V+ PIP I I+ AL + Sbjct: 7 LLTLTDEVADALRDGAPVVALESTIISHGMPYPQNVAMATEVEGIIRAAGAVPATIAVLEGRPRIGLTADDLELLAS-DEDVAKVSVRDLPFVVARRSHGATTVAATMRLAALAGIRVFVTGGLGGVHRGAQQSFDESADLTELGSTDVAVISAGVKSILDIGLTLERLETLGVPVLAYGSDEFPSFYSRSSGHAAPMRVDSAAEVAAVMAAKWDLGIAGGVVVANPIPEADEIPADEIGGIIEQALAD 254 HSP 2 Score: 35.4242 bits (80), Expect = 9.976e-66 Identity = 17/34 (50.00%), Postives = 22/34 (64.71%), Query Frame = 3 Query: 876 ITGNAETPFLLARVNDLTGGFSLPQTFAL*KINA 977 I GN TP+LL R+ ++TGG SL AL + NA Sbjct: 260 IHGNEATPYLLGRIVEITGGASLTANIALVRANA 293
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_LYSSC (Pseudouridine-5'-phosphate glycosidase OS=Lysinibacillus sphaericus (strain C3-41) GN=psuG PE=3 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 1.549e-65 Identity = 136/254 (53.54%), Postives = 173/254 (68.11%), Query Frame = 1 Query: 109 KNLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREARE 870 K + +S EV + G +VALESTIISHGMPYPQN +TA+EVE I+R+NGAVPATIA+++G +GLS EELE A K +RRD+ +++AT+ GATTV+ATM A + GI +FVTGGIGGVHR E TMD+S+DL+EL +T VAV+ AG KSILDI TLEYLET GV V Y T+E PAF+T SG V ++D+PE+ A ++ +L L G VI PIP A I + I+ AL EA E Sbjct: 2 KEFIVLSEEVKAGQAKGLPIVALESTIISHGMPYPQNVQTAREVEQIIRDNGAVPATIALIDGKIKIGLSDEELEMFGNAQGVA-KASRRDLGYLLATKKLGATTVAATMICAELAGIEIFVTGGIGGVHRGAETTMDVSADLEELAQTNVAVICAGAKSILDIGLTLEYLETKGVPVVGYGTDELPAFYTRQSGFDVNFQLDTPEEIAEMLSAKWQLGLKGGAVIANPIPEAEALEHGFITNIIEKALVEAEE 254
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_SYMTH (Pseudouridine-5'-phosphate glycosidase OS=Symbiobacterium thermophilum GN=psuG PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 1.696e-65 Identity = 130/254 (51.18%), Postives = 164/254 (64.57%), Query Frame = 1 Query: 109 KNLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGE----HTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALR 858 K L+ +PEV EAL VVALESTIISHGMPYP+N TA+EVE IVR+ GAVPATIA++ G VGL+ EELE LA +A K + RD+ V+A + GATTV+ T A+ GI VFVTGGIGGVHR+ D+S+DL LGRT + VV AG KS+LDI TLE LET GV V Y+T+ FP F+T +G V RVD+PE+ A +I + L G+++ P+P EHA +E I AL+ Sbjct: 2 KYLLSYTPEVREALDRNRPVVALESTIISHGMPYPENLRTAREVEEIVRSQGAVPATIAVIGGRCKVGLTDEELELLAT-SPEAVKVSLRDLPVVLARKSLGATTVATTATIAAAAGIEVFVTGGIGGVHRKSPGDPAQMWDVSADLTVLGRTDITVVCAGAKSVLDIGATLEVLETLGVTVLGYRTDRFPGFYTRDTGFGVDARVDTPEEAAAVIHARQQTMLPGGVLVVNPVPEEHAMDPDEVERHIADALK 254 HSP 2 Score: 38.1206 bits (87), Expect = 1.696e-65 Identity = 19/37 (51.35%), Postives = 25/37 (67.57%), Query Frame = 3 Query: 870 EDITGNAETPFLLARVNDLTGGFSLPQTFAL*KINAL 980 E +TG A TP+LLAR+ ++T G +L AL K NAL Sbjct: 259 EGVTGKAVTPYLLARLKEVTSGRALQTNIALVKHNAL 295
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_DEIRA (Pseudouridine-5'-phosphate glycosidase OS=Deinococcus radiodurans GN=psuG PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 1.087e-64 Identity = 133/257 (51.75%), Postives = 165/257 (64.20%), Query Frame = 1 Query: 91 PIDSLAKNLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALRE 861 P + + + + PEV+ ALS G VVALESTIISHGMPYPQN E A+ VE IVR+NGAVPATIA+L G VGLS +ELE LA QK + RD+ VA G+GATTV++TM A++ GI VF TGG GGVHR TMDIS+DL EL RT V VVSAG+KSILDI TLE LET GV +EFPAF++ SG P V +P + AR++ V L L G+++ P+P +E+ I AL + Sbjct: 5 PSNDRLHSYLDLQPEVAAALSQGRPVVALESTIISHGMPYPQNVEMARGVEQIVRDNGAVPATIAVLGGRLKVGLSADELELLAT-DKAVQKISTRDLPVTVALGGHGATTVASTMRIAALAGIRVFATGGTGGVHRGAGETMDISADLLELARTDVCVVSAGVKSILDIGLTLEVLETQGVPAITLGADEFPAFYSRRSGFSSPLTVQTPAEAARVLKVKWDLGLTGGVLLANPVPETAEIPAEEMETHITRALAD 260 HSP 2 Score: 32.7278 bits (73), Expect = 1.087e-64 Identity = 16/34 (47.06%), Postives = 22/34 (64.71%), Query Frame = 3 Query: 876 ITGNAETPFLLARVNDLTGGFSLPQTFAL*KINA 977 ++G TP+LL R+ +LTGG SL AL + NA Sbjct: 266 LSGKDTTPYLLGRIVELTGGRSLETNIALVRHNA 299
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_CHLSY (Pseudouridine-5'-phosphate glycosidase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=psuG PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 1.418e-64 Identity = 129/253 (50.99%), Postives = 165/253 (65.22%), Query Frame = 1 Query: 115 LVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMK---LKLGSGIVIGVPIPREHAAFGRVIESAIQSALREA 864 +++I+ EV+ AL G AVVALEST+ISHG+PYP N A+ +EA VR GAVPATI ++EG+P +GL+ ELERLA G + +K +RRDI + +GATTV+ATM A+ GI VF TGGIGGVHR H+ D+S+DL ELGRTPV VV AG K+ILD+P TLEYLET GV V Y+T EFPAF+T SG V AR+ + + G+++ VP P HA +E+AI AL A Sbjct: 1 MLRIAEEVTTALEEGRAVVALESTLISHGLPYPHNLAVAEGLEAEVRAAGAVPATIGLIEGVPVIGLNGNELERLAVGGDRVRKLSRRDIGAAIVDHADGATTVAATMALAAAAGIEVFATGGIGGVHRGATHSWDVSADLTELGRTPVLVVCAGAKAILDLPATLEYLETQGVPVVGYQTVEFPAFYTPHSGLTVAAVAADALAAARMWRIQRRYHTFAAPGGMLLCVPPPERHALEREAVEAAIGRALARA 253 HSP 2 Score: 28.4906 bits (62), Expect = 1.418e-64 Identity = 16/39 (41.03%), Postives = 22/39 (56.41%), Query Frame = 3 Query: 858 RS*GEDITGNAETPFLLARVNDLTGGFSLPQTFAL*KIN 974 R+ E + G A TPFLLA + + T G S+ AL + N Sbjct: 252 RAEAEGVRGPAVTPFLLAAMAEETSGESIETNIALLRNN 290 The following BLAST results are available for this feature:
BLAST of DY258036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258036 ID=DY258036; Name=DY258036; organism=Citrus clementina; type=EST; length=1172bpback to top |