DY258036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_ALKMQ (Pseudouridine-5'-phosphate glycosidase OS=Alkaliphilus metalliredigens (strain QYMF) GN=psuG PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.712e-64 Identity = 133/252 (52.78%), Postives = 173/252 (68.65%), Query Frame = 1 Query: 118 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 ++ +PEV +A++ G +VALESTIISHGMPYPQN ETAK+VE ++R GAVPATIAI++G VGL+ EEL L + K +RRD+ ++A NGATTV++TM A++ GI VFVTGGIGGVHR + T+DIS+DL EL +T VAVV AG+KSILDI TLE LETHGV + Y+T +FPAF+T SG V V + E+ AR + L L G+V+ PIP +A +I AI A++EA K Sbjct: 8 LEYAPEVKKAIAEGRPIVALESTIISHGMPYPQNVETAKKVEDMIREGGAVPATIAIVKGKIKVGLTEEELMFLGQ-SKDVVKASRRDLPLIIAKELNGATTVASTMIIAALAGIKVFVTGGIGGVHRGAQETLDISADLMELAQTNVAVVCAGVKSILDIGLTLEVLETHGVPIVGYQTEDFPAFYTRKSGYGVDYAVANVEELARALKAKWDLDLKGGVVVANPIPEAYAMDEALITQAIDEAVQEAAAK 258
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG1_RHIL3 (Pseudouridine-5'-phosphate glycosidase 1 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=psuG1 PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 9.087e-64 Identity = 124/249 (49.80%), Postives = 162/249 (65.06%), Query Frame = 1 Query: 118 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREA 864 + S EV+ A G +VALESTII+HGMPYP N E A+ VEAI+R GAVPATIA++ G +GL ELE+LAK ++ K +R D+A +A R GATTV+ATM A+ GI VF TGGIGGVHR E + DIS+DL+EL RT V VV AG K+ILDIP+TLE LET GV V Y++ EFPAF++ +SG + P ++SP A V +L + G+++ P+P +E I+ AL A Sbjct: 20 IAYSKEVASAKQRGAPLVALESTIITHGMPYPGNIEMARSVEAIIREQGAVPATIAVIHGTLHIGLEAAELEQLAK-ATEVMKVSRADLAFAIAERRTGATTVAATMIAAARAGIRVFATGGIGGVHRGAEESFDISADLEELARTGVIVVCAGAKAILDIPKTLEVLETRGVPVVTYESEEFPAFWSRSSGIRSPLSLNSPAAIANFQTVREQLGIDGGMLVANPVPEADEIASEEMEIYIERALDSA 267 HSP 2 Score: 34.6538 bits (78), Expect = 9.087e-64 Identity = 17/36 (47.22%), Postives = 24/36 (66.67%), Query Frame = 3 Query: 870 EDITGNAETPFLLARVNDLTGGFSLPQTFAL*KINA 977 +++TG A TP+LL+ + DLT G SL AL + NA Sbjct: 270 DEVTGKAVTPYLLSTIFDLTDGQSLKTNIALVENNA 305
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_BRAHW (Pseudouridine-5'-phosphate glycosidase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=psuG PE=3 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 1.110e-63 Identity = 132/255 (51.76%), Postives = 170/255 (66.67%), Query Frame = 1 Query: 109 KNLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 + + IS EV EAL AVVALESTIISHGMPYP+N E+A E +R N AVPATIAI++G VGL+ EELE + K++RRD+ ++A + +GATTV+ TM AS+ GI VF TGGIGGVHR + T DIS+DL+EL +T VAVV AG KSILDI T+EYLET G+ V YKT FPAF+T SG KV ++D+ +D A ++D KL L G+++ PIP E+ I I ++EAR+K Sbjct: 5 EEFLDISEEVKEALHEKKAVVALESTIISHGMPYPENVESALNSEKNIRENNAVPATIAIIKGRIKVGLNKEELEYMGS-NKNIAKSSRRDLPVMLALKKDGATTVTTTMIGASLAGIKVFATGGIGGVHRYAQETFDISADLQELSKTNVAVVCAGAKSILDIGLTIEYLETFGIPVLGYKTENFPAFYTRESGYKVDYKIDTTKDIANILDTKWKLGLNGGVLVCNPIPEEYEMDKDYINKIIDETVKEARDK 258
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_ACHLI (Pseudouridine-5'-phosphate glycosidase OS=Acholeplasma laidlawii (strain PG-8A) GN=psuG PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 7.955e-62 Identity = 131/251 (52.19%), Postives = 166/251 (66.14%), Query Frame = 1 Query: 118 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREARE 870 + I P+V +AL G VVALESTII+HGMPYP+N ETA VE IV NGA+PATIAI++G VGL+ EL L KL S K ++RDI + V + +GATTVSAT+ A MVGI VF TGGIGGVH+ T DIS DL+E+ VAVVSAG K+ILD+ TLEYLET GV V YKT+EFPAFF+ SG ++D A+L+ + L GIV+ PIP+ +A ++ AI SA+ A++ Sbjct: 5 IDIHPKVLDALRSGKPVVALESTIIAHGMPYPKNVETALNVEKIVEQNGAIPATIAIIDGRIKVGLNPNELTSLGKL-SNVLKVSKRDIPYCVIKKYSGATTVSATILIADMVGIKVFATGGIGGVHKDAAATFDISRDLEEISEKQVAVVSAGAKAILDLDLTLEYLETKGVEVIGYKTSEFPAFFSNASGLNTTFQLDEASQIAQLMYTKWNMGLSGGIVVANPIPQNYAIDKDSLDKAISSAILSAKD 254
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_HAEPS (Pseudouridine-5'-phosphate glycosidase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=psuG PE=3 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 6.734e-61 Identity = 127/254 (50.00%), Postives = 166/254 (65.35%), Query Frame = 1 Query: 112 NLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 N + +S EV ++ G +VALESTIISHGMPYPQN A+EVE I+R+NGAVPATIAI++G +GLS +ELE A K +RRD+ ++A++ GATTV++TM A + GI FVTGG+GGVH+ E T+DIS+DL EL +T V V+ AG KSILD+ TLEYLET GV V YKT PAFFT SG + + + A +I V +L L G+V+ PIP+E I I +A++EA EK Sbjct: 3 NYLILSDEVQRGMAQGLPIVALESTIISHGMPYPQNVAMAREVEQIIRDNGAVPATIAIIDGKIRIGLSDDELELFGSSKGIA-KVSRRDLPQIIASKKLGATTVASTMICAHLAGIKFFVTGGLGGVHKGWETTLDISADLDELAQTSVTVICAGAKSILDLDATLEYLETKGVPVVGYKTKNLPAFFTRDSGLPLALSCEELTEIAEMIKVKWQLGLEGGVVVANPIPQEDELAPSYINGIIDTAVKEAEEK 255
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_RHILO (Pseudouridine-5'-phosphate glycosidase OS=Rhizobium loti GN=psuG PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 5.774e-60 Identity = 120/253 (47.43%), Postives = 154/253 (60.87%), Query Frame = 1 Query: 106 AKNLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREA 864 A+ + I V++AL+ G VVALESTII+HGMPYP N A VE I+ + GAVPATIA++ G +GLS E E LA G A K +R D+ VA G TTV+ATM A MVGI VF TGGIGGVH+ E + DIS+DL EL RTPV VVSAG K+ILDI +TLE LET GV V + PAF++ S + P + PE+ A + L LG G+++ P+P H + I++A + A Sbjct: 6 ARPFIDIHAPVAQALAAGRPVVALESTIITHGMPYPDNGAMAANVEKIISDGGAVPATIAVIGGRIKIGLSDGERESLAMTGD-AMKLSRADLGFAVAQGRTGGTTVAATMIAAEMVGIKVFATGGIGGVHKGAEKSFDISADLDELARTPVIVVSAGAKAILDIEKTLEVLETRGVPVVGHGCETMPAFWSRQSPFRAPLTLYKPEEIAHFFRTRVALGLGGGVLVANPVPENHEIPAEEMAGYIEAAQKAA 257 HSP 2 Score: 36.5798 bits (83), Expect = 5.774e-60 Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = 3 Query: 873 DITGNAETPFLLARVNDLTGGFSLPQTFAL*KINA 977 ++TG A TPFLL ++ +LTGG SL AL + NA Sbjct: 261 NVTGKAVTPFLLGKILELTGGRSLKTNIALVENNA 295
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_LEGPH (Pseudouridine-5'-phosphate glycosidase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=psuG PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 2.829e-59 Identity = 126/252 (50.00%), Postives = 171/252 (67.86%), Query Frame = 1 Query: 112 NLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAR 867 +L++ + EV +A++ + +VALESTIISHGMPYP N TA EVE I+R GA+PATIA+ +G VGL+ E +E LA L + K +RRDI+ V++ + +TTV+ATMF A M +P+FVTGGIGGVH+ + DIS+DL EL TPV VV +G KSILD+P+TLE LET GV V Y T+EFPAF++ +SG VP R++S E+ A L+ + KL + +GIV+ PIP I I+ A EA+ Sbjct: 4 DLLEFNEEVLDAINDKNPIVALESTIISHGMPYPDNLTTAIEVENIIRRQGAIPATIAMHQGKIRVGLTQEVMEHLA-LQKEVIKASRRDISFVLSRKVTASTTVAATMFCAHMAKLPLFVTGGIGGVHQDVTMSFDISADLIELSNTPVTVVCSGAKSILDLPKTLEVLETFGVPVIGYATDEFPAFYSRSSGIPVPQRLNSAEEVANLMSIQQKLNMKNGIVVANPIPVSAELSDEEISPYIKQAHDEAK 254
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_HERA2 (Pseudouridine-5'-phosphate glycosidase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=psuG PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 8.232e-59 Identity = 125/247 (50.61%), Postives = 163/247 (65.99%), Query Frame = 1 Query: 124 ISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREA 864 ++PEV A ++G VVALEST+ISHG+PYP N E A ++EA VR GAVPATIA+++G VGL+ E++E A + K +RRDI + VA +GATTV+ATM A + GI VF TGGIGGVHR T D+S+DL ELG++ V VV AG KSILD+P TLE LET+GV V Y T E PAF++ SG ++ RVD P A + GSG+V+ VP P E A + +E+AI A+ +A Sbjct: 6 LAPEVQAAFANGQPVVALESTVISHGLPYPHNREIALQLEATVRAGGAVPATIAVIQGQVHVGLTNEQIEHFAT-ATDVLKLSRRDIGYAVAAGRDGATTVAATMAIAELAGIQVFATGGIGGVHRGARDTWDVSADLGELGKSSVLVVCAGAKSILDLPATLEVLETYGVPVVGYTTEELPAFYSAHSGLQLGRRVDDPTQAAAAWAAHRLYGGGSGMVLAVPPPVEKALDPQFVEAAIGRAIAQA 251
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_ROSS1 (Pseudouridine-5'-phosphate glycosidase OS=Roseiflexus sp. (strain RS-1) GN=psuG PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 1.069e-58 Identity = 127/251 (50.60%), Postives = 161/251 (64.14%), Query Frame = 1 Query: 118 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQ--KTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREA 864 + +S EV AL G VVALEST+ISHG+PYP N E A +E VR+ GAVPAT+ I+ G+P VG+ + R A K +RRDI +VVA G+GATTV+ATM A + G+ VF TGGIGGVHR T D+S+DL EL RTPV VV AG K+ILD+P TLEYLET GV V ++T EFPAF++ +SG V D+ AR + L G+G+V+ VP P E A V+E+AI+ AL A Sbjct: 12 IAVSAEVQAALDAGQPVVALESTVISHGLPYPHNLELALAMEQEVRDQGAVPATVGIVAGVPTVGMDAAAIRRFAHPDPHHPPLKVSRRDIGYVVAAGGDGATTVAATMALAHLAGVQVFATGGIGGVHRGARETWDVSADLTELERTPVLVVCAGAKAILDLPATLEYLETGGVPVLGWRTAEFPAFYSVSSGLPVAYAQDA-SFVARAWKAHRALG-GAGMVLAVPPPVEDAIDRAVVEAAIERALNRA 260 HSP 2 Score: 25.409 bits (54), Expect = 1.069e-58 Identity = 16/36 (44.44%), Postives = 20/36 (55.56%), Query Frame = 3 Query: 870 EDITGNAETPFLLARVNDLTGGFSLPQTFAL*KINA 977 E + G A TPFLLA + T G S+ AL + NA Sbjct: 263 EGVHGPAVTPFLLAALARETEGESVRANVALLRQNA 298
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: YOW5_SCHPO (Pseudouridine-metabolizing bifunctional protein C1861.05 OS=Schizosaccharomyces pombe GN=SPBC1861.05 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.404e-58 Identity = 127/249 (51.00%), Postives = 168/249 (67.47%), Query Frame = 1 Query: 124 ISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAY--KTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREA 864 +S EV+EAL + VVALESTII+HGMPYPQN E A +VE+ VR+ GAVPATIA+L G +GL +L LAK G A K +RRD+++V + R NG TTV+ATM A GI VF TGGIGGVHR E++MDIS+DL ELGRT VAVVSAG+KSILDI RTLE LET GV V + FPAFF+ S + P +++P+ A ++ N++L G ++ +P P + +E+ I++ L+ + Sbjct: 43 LSKEVTEALKNNVPVVALESTIITHGMPYPQNEELAIQVESKVRSMGAVPATIALLNGQCTIGLEQFQLSELAKSGETAYKVSRRDLSYVASQRLNGGTTVAATMILARAAGIDVFATGGIGGVHRGAENSMDISADLIELGRTRVAVVSAGVKSILDIGRTLEVLETQGVPVVTLGPPKSAFPAFFSRESKFQSPLSLETPQLIANMLFSNIQLGQECGTLVAIPTPHHCSIDYEKMEALIETCLQRS 291 The following BLAST results are available for this feature:
BLAST of DY258036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258036 ID=DY258036; Name=DY258036; organism=Citrus clementina; type=EST; length=1172bpback to top |