DY258036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_JANSC (Pseudouridine-5'-phosphate glycosidase OS=Jannaschia sp. (strain CCS1) GN=psuG PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 5.336e-58 Identity = 129/249 (51.81%), Postives = 164/249 (65.86%), Query Frame = 1 Query: 127 SPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 SPEV+EA + G +VALESTII+HGMPYPQN +TA+ VEA VR GAVPATIAI++G +GL+ ELE LA+ A K +R D+A +A G GATTV+ATM A++ GI VF TGGIGGVH+ E T DIS+DL+EL TPV V++AG K+ILD+P+TLE LET GV V A+ + FPAF++ SG P R DS + AR + KL L G ++ PIP + + I A EA K Sbjct: 8 SPEVAEARAAGAPLVALESTIITHGMPYPQNLDTARAVEAEVRAAGAVPATIAIMDGRMHIGLTGTELEVLAQADGVA-KLSRADLAACLARGGVGATTVAATMICAALAGIHVFATGGIGGVHKGAEDTFDISADLRELAHTPVTVIAAGAKAILDLPKTLEVLETLGVPVIAHGQDAFPAFWSRDSGLPAPLRADSATEIARAHLMRSKLGLPGGQLVANPIPEDAEIPASTLAPLIVQAQSEADAK 255
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_COPPD (Pseudouridine-5'-phosphate glycosidase OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=psuG PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.552e-57 Identity = 119/251 (47.41%), Postives = 165/251 (65.74%), Query Frame = 1 Query: 115 LVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAR 867 +++I+P V EA+ VVALESTII+HGMPYP N TA EVE +++ GAVPATI ++ G+ VGLS EE+ L++ K + +D++ A + +G TTVSATMF + GI VF TGGIGGVHR + D+S+DL+ LG P+ VV AG K+ILD+P TLEYLET GV V YKT+EFPAF+ SG K+ V +P + A++I L++ I++G P P E A +E I++AL++A+ Sbjct: 1 MLQIAPHVKEAIETLKPVVALESTIITHGMPYPANLHTALEVEQVIKEAGAVPATIGVINGIIKVGLSEEEITYLSQ-AKDLHKISLKDLSVAAAKKLSGGTTVSATMFASYKAGIQVFATGGIGGVHRDARESFDVSTDLEALGSIPITVVCAGAKAILDLPATLEYLETKGVLVVGYKTDEFPAFYYGRSGLKLEHSVTTPGELAQIIRERDALEINKAILVGNPPPEEMALEKGKVEQLIEAALQQAK 250
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_PARDP (Pseudouridine-5'-phosphate glycosidase OS=Paracoccus denitrificans (strain Pd 1222) GN=psuG PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 4.517e-57 Identity = 124/251 (49.40%), Postives = 162/251 (64.54%), Query Frame = 1 Query: 115 LVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKL-GSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREA 864 L+ +SPE S+AL+ +VALESTII+HGMPYPQN E A++VEA VR GAVPATIA++ G VGL E LE LA + K +R D+A +A GATTV+ATM A + GI VF TGGIGGVHR E + DIS+DL+EL ++PV VV+AG K+ILD+P+TLE LET GV V A+ ++ PAF++ SG P R+D P A + +L L G ++ PIP E + ++ AL EA Sbjct: 4 LIALSPETSQALADRQPLVALESTIITHGMPYPQNLEVAQQVEAAVREEGAVPATIAVMGGRIRVGLDAEALEALASTPAEQVMKLSRADLAACLALGRTGATTVAATMICAHLAGIEVFATGGIGGVHRGAETSFDISADLQELAQSPVTVVAAGAKAILDLPKTLEVLETLGVPVIAFGQDQLPAFWSRESGLAAPLRMDDPAQIAASARLRRELGLSGGQLVVNPIPPEAEIPRAEMIPVVEQALSEA 254
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_DINSH (Pseudouridine-5'-phosphate glycosidase OS=Dinoroseobacter shibae (strain DFL 12) GN=psuG PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 1.716e-56 Identity = 120/250 (48.00%), Postives = 159/250 (63.60%), Query Frame = 1 Query: 112 NLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALRE 861 + V + +V AL VVALESTII+HGMP+P N E AK VE +R GA+PATIA+L+G+ +GL +ELE LAK+ A K +R DI + ++ + TTV+ATM A M GI VF TGGIGGVH+ E + DIS+DL ELGRT V VV+AG K+ILD+P+TLE LET GV V Y+T+ PAF+T S +P R+DS + + V L+LG G+++ PIP +I I +A E Sbjct: 6 SFVDVHADVRNALETNAPVVALESTIITHGMPFPDNVEMAKAVEEEIRARGAIPATIAVLDGVLKIGLGADELEALAKV-KDALKISRADIGYAISQGKSAGTTVAATMIVAQMAGIRVFATGGIGGVHKGVETSFDISADLTELGRTDVIVVAAGAKAILDVPKTLEVLETQGVSVVGYRTDTLPAFWTSGSDLDIPLRLDSAAEISEFQKVRDALRLGGGMLVANPIPAGDEIPAEIINGYIATAQAE 254
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_SERP5 (Pseudouridine-5'-phosphate glycosidase OS=Serratia proteamaculans (strain 568) GN=psuG PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 2.928e-56 Identity = 122/250 (48.80%), Postives = 162/250 (64.80%), Query Frame = 1 Query: 124 ISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 I PEV AL HAVVALES +I+HG+ YP N ETA VEA VR +GAVPATI I +G VG+ E++ER A A K + ++ V+A + GATTV++++ A + GI F + GIGGVHR GE +MDISSDL + RT V VV AG K+ILDI RTLE+LET V V Y+T++FPAF+ +SG + P R+DS E A+ ID+N L + +V+ P E A R +++AIQ+A+ A K Sbjct: 11 IHPEVKAALESRHAVVALESNVITHGLNYPANVETALAVEAAVRRSGAVPATIGICDGEILVGMHREQIERFATTPGIA-KVSSNNLPFVLAQKSMGATTVASSLMLAELAGIGFFASAGIGGVHRGGEDSMDISSDLIQFTRTNVTVVCAGAKNILDIGRTLEFLETQCVPVVTYQTDDFPAFYCRSSGYRSPQRLDSLEAIAQAIDINRALPGSAAMVVAAPTKPEDAIDSRDVQAAIQAAIENAAAK 259
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_MYCAP (Pseudouridine-5'-phosphate glycosidase OS=Mycoplasma agalactiae (strain PG2) GN=psuG PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 1.453e-55 Identity = 123/250 (49.20%), Postives = 154/250 (61.60%), Query Frame = 1 Query: 118 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAR 867 + S EV AL H VVALESTII+HGMPYP+N E A VE I+R GAVPATIAI+ G+ VGL +E+ LAKL KT++RD +V+A + NG TTVS T+ A VGIPVF TGGIGGVHR E T DIS DL EL V VV AG K ILD+ TLEYLET GV V Y +++ PAF++ +S V V S + A ++ K G GI++ PIP ++ I I A+ +A+ Sbjct: 3 IVFSKEVESALKHKRPVVALESTIITHGMPYPKNVEMALNVENIIRKQGAVPATIAIINGIIHVGLENDEINELAKL-KDVIKTSKRDFGYVLANKKNGGTTVSGTVLVAQKVGIPVFATGGIGGVHRGAEITFDISRDLDELSTNNVLVVCAGAKLILDLGLTLEYLETKGVEVLGYNSDKLPAFYSSSSEFNVTYNVHSASEVAAIMKAKWKFTNG-GIILANPIPEQYGLEYEYILDNINKAIEQAK 250
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_FERNB (Pseudouridine-5'-phosphate glycosidase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=psuG PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 1.796e-55 Identity = 112/250 (44.80%), Postives = 155/250 (62.00%), Query Frame = 1 Query: 124 ISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 IS +V +AL G V+ALEST+I+HG+PYP N ETAK +E + NG VPATI IL+G VG+S E++ + L + K R+I + V + + ATTVSATM A + GI VF TGGIGGVH D+S D+ E+ ++ V VVSAG KSILD+ +T+E+LET V V YKTN+FP F+ S + RVDSPED A++ L + +++ PIP+E + ++ ++ AL E EK Sbjct: 3 ISEKVKKALEDGIPVIALESTVIAHGLPYPHNVETAKMLEEMALENGVVPATIGILKGEIIVGMSQEQINEM--LADEPLKIGTREIPYAVGMKKSAATTVSATMRIAKIAGIDVFATGGIGGVHIGD---WDVSQDITEMAKSDVIVVSAGCKSILDVKKTIEFLETFQVTVVGYKTNKFPIFYEGLSDFNLEHRVDSPEDIAKIFRAKKSLGIEGALLVANPIPQEFVISEQEVDGYMKQALSECFEK 247 HSP 2 Score: 31.5722 bits (70), Expect = 1.796e-55 Identity = 16/35 (45.71%), Postives = 21/35 (60.00%), Query Frame = 3 Query: 876 ITGNAETPFLLARVNDLTGGFSLPQTFAL*KINAL 980 ITG A TP+LL+R+ L+ G +L L K N L Sbjct: 249 ITGKAVTPYLLSRIAQLSNGKTLTSNIELLKNNVL 283
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_RUBXD (Pseudouridine-5'-phosphate glycosidase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=psuG PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 8.814e-55 Identity = 115/248 (46.37%), Postives = 153/248 (61.69%), Query Frame = 1 Query: 118 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALRE 861 V+ +PEV+EAL G VVALEST+ISHG+P P N A+ +E VR GAVPAT+ ++ G+ VGL EELE LA + K + RD+ AT +GATTV+AT A++ GI +F TGG+GGVHR + D+S+DL L R PVAVV +G+KSILD+P TLE LET GV V +++ F F+ SG + V+ + A LI L LG G+VI P+P E + E A++S L E Sbjct: 4 VQPAPEVAEALEGGRPVVALESTLISHGLPRPDNLRVARALEEAVRREGAVPATVGVVGGVARVGLGPEELELLAS--GEVPKLSARDLPAAAATGSSGATTVAATAHLAALCGIKLFATGGLGGVHRGARESWDVSADLAALSRAPVAVVCSGVKSILDVPATLEQLETLGVPVVGFRSRSFAGFYLTDSGCALDWSVEDEGEAAALIRALPGLGLGCGVVISNPLPPEEQLDPSLHERALRSGLEE 249 HSP 2 Score: 25.409 bits (54), Expect = 8.814e-55 Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 3 Query: 876 ITGNAETPFLLARVNDLTGGFSL 944 I+G TPFLL + TGG SL Sbjct: 255 ISGKEVTPFLLEHFRERTGGESL 277
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG1_PHOLL (Pseudouridine-5'-phosphate glycosidase 1 OS=Photorhabdus luminescens subsp. laumondii GN=psuG1 PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 2.740e-54 Identity = 120/251 (47.81%), Postives = 163/251 (64.94%), Query Frame = 1 Query: 121 KISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 K S EV EAL G VVALES +I+HG+ YP N TAK VE VR +GA+PATI I +G +G+S E++E+ A S K RDI V+A+ G GATTV++++ A + GI F + GIGGVHR E +MDIS+DL +L R+ VAVV AG K+ILDI TLE+LET V V +Y++++FPAF+ +SG K P R+D A+ I++N L G G++I P E A + I+ IQ A+ EA++K Sbjct: 10 KFSLEVKEALESGKPVVALESNVITHGLDYPDNVTTAKNVEQAVRESGAIPATIGIDKGEFLIGMSDEQIEKFAT-ASHVPKVTSRDIPVVLASGGMGATTVASSILAAEIAGIKFFCSAGIGGVHRGAETSMDISADLTQLTRSRVAVVCAGAKNILDIGLTLEFLETWNVPVISYQSDDFPAFYCRSSGFKSPQRLDELAVIAKAIEINWMLPGGKGVLITTPTKPEDALDNQKIDIIIQEAVLEAKKK 259
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_DICZE (Pseudouridine-5'-phosphate glycosidase OS=Dickeya zeae (strain Ech1591) GN=psuG PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 2.320e-53 Identity = 115/253 (45.45%), Postives = 162/253 (64.03%), Query Frame = 1 Query: 115 LVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 L++ S EV +AL G VVALEST+I+HG+PYP N TA+++EA+VR GA+PATI I G +G+S ++ER K + RDI ++A G GATTV++++ A + GIP F + GIGGVHR E +MDIS+DL + R+ VAVV AG KSILD+ TLEYLET V + +Y++++FPAF+ +SG P R+D P AR I+++ KL S ++I PI A +ES I+ A +A + Sbjct: 10 LLRFSDEVKDALHTGKPVVALESTVIAHGLPYPDNVATAQKIEAVVRAEGAIPATIGIENGRFLIGMSDADIERFGATNG-IPKASSRDIPVILAQGGKGATTVASSLVAADLAGIPFFASAGIGGVHRGAEKSMDISADLVQFTRSRVAVVCAGAKSILDLGLTLEYLETQCVPIISYQSDDFPAFYCRSSGFPSPHRLDDPAVVARSIEMHWKLGNRSSVLITHPIHENDAIDKDEVESIIREAALQAEHE 261 The following BLAST results are available for this feature:
BLAST of DY258036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258036 ID=DY258036; Name=DY258036; organism=Citrus clementina; type=EST; length=1172bpback to top |