DY258036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_THET2 (Pseudouridine-5'-phosphate glycosidase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=psuG PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.842e-42 Identity = 109/235 (46.38%), Postives = 144/235 (61.28%), Query Frame = 1 Query: 169 VALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPI----PREHAAFGRVIESAIQSALRE 861 VALES +++HG+PYP N E A +E VR GA P TIA++ G VGLS EE+E LA G A+K + ++A ++A + TTV+AT+ A + GIPVF TGGIGGVH D S+DL L RTP+ VVS+G K+ILD+ TLE LET GV V Y+T+ PAFF+ S VP RVD+P + AR+ L LG G+++ P+ P E A +E A + A RE Sbjct: 6 VALESAVLTHGLPYPLNLEVALALEEAVREEGATPKTIALVRGEVRVGLSPEEMEALAAGG--AEKASLWNLAALLAQGRSAGTTVAATVHLAHLHGIPVFATGGIGGVH---PEPYDESADLVALSRTPILVVSSGPKAILDLRATLERLETLGVSVVGYRTDRLPAFFSPDSPFPVPARVDTPMEAARVYLRARALGLG-GVLLVNPVSQGLPYEQVALW--VEEAGRMAARE 232
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_CORA7 (Pseudouridine-5'-phosphate glycosidase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=psuG PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 7.001e-42 Identity = 97/249 (38.96%), Postives = 143/249 (57.43%), Query Frame = 1 Query: 118 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREA 864 ++ S EV ALS+G ++ LES ++SHG+PYP+N E + I+R+NG VPA I + C+G S +++E L K K + RDIA +A GATT SA++ + GI +F T G+GGVHR T+D+S+DL E+ VVSAG+K LDIP+T E LE+ GV V + T+EFPAF+ SG+ + P + A +++ G +I V +E A ++E A+Q +L A Sbjct: 6 IEYSDEVQNALSNGLPILGLESNVLSHGLPYPRNLEMFNACDEIIRSNGVVPALTFIRDKRICIGASPKDVELLTD-DPKPIKVSARDIALCIAQGKVGATTASASIAICELAGIRIFSTAGLGGVHRDFSETLDVSADLHEISSRKTIVVSAGVKKFLDIPKTSEVLESLGVPVVGFGTSEFPAFYCRKSGAFLESFSQDPIEIATAAATHIETVGPGGFLILVAPSKEIALDDELVEKAVQRSLINA 253
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_THELT (Pseudouridine-5'-phosphate glycosidase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=psuG PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 2.753e-38 Identity = 95/216 (43.98%), Postives = 130/216 (60.19%), Query Frame = 1 Query: 166 VVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHA 813 ++ALEST+I+HG+P+P N +TA E+E + G TI I+ G VGLS EE+ ++A K +I +A + ATTVSATM A + I VF TGGIGGVH+ + D+S DL EL RT + VVSAG KSILD+ T+E LET + V YKT+E PAF+ +++ + RVDS E+ A + K L +++ PIP EHA Sbjct: 4 ILALESTVIAHGLPFPINIDTAVELEELAAETGCSAKTIGIIAGQIKVGLSREEIVQIASR-KDVLKIGTAEIPFALAKKMWAATTVSATMRIAHLNNIKVFATGGIGGVHKIDQ--WDVSQDLAELSRTRMIVVSAGPKSILDLRSTVEMLETFQITVVGYKTDELPAFYCKSTSIHIN-RVDSFEEIASIFLFKEKFNLPGAVLVFNPIPDEHA 215
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_THEMA (Pseudouridine-5'-phosphate glycosidase OS=Thermotoga maritima GN=psuG PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 5.192e-37 Identity = 91/246 (36.99%), Postives = 138/246 (56.10%), Query Frame = 1 Query: 136 VSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 + + G VV +E+T+ HG+P + E + + I R G A I IL+G G+S EELE + + G A K R+I VVA N ATTVSAT+F + +GI V VTGG GGVH +D+S DL E+ + +VS+GIKSILD+ T E LET + + ++TNEFP FF+ SG +VP R+++ E+ ++ + +++L +++ P+P E+ IE ++ E K Sbjct: 3 IESRIEKGKPVVGMETTVFVHGLPRKEAIELFRRAKEISREKGFQLAVIGILKGKIVAGMSEEELEAMMREG--ADKVGTREIPIVVAEGKNAATTVSATIFLSRRIGIEVVVTGGTGGVH---PGRVDVSQDLTEMSSSRAVLVSSGIKSILDVEATFEMLETLEIPLVGFRTNEFPLFFSRKSGRRVP-RIENVEEVLKIYESMKEMELEKTLMVLNPVPEEYEIPHDEIERLLEKIELEVEGK 242
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_THEP1 (Pseudouridine-5'-phosphate glycosidase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=psuG PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 6.781e-37 Identity = 97/260 (37.31%), Postives = 143/260 (55.00%), Query Frame = 1 Query: 136 VSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREKI*QVMQRLLSCLQE 915 + + G+ VV +E+T+ HG+P + E + + I R G I IL+G VG+S EELE + + G A K R+I VA N ATTVSAT+F + +GI V VTGG GGVH +D+S DL E+ + +VS+GIKSILD+ T E LET + + +KT+EFP FF+ SG +VP RV+S E+ ++ + ++ +++ P+P E+ IE ++ EA K +V LL L E Sbjct: 3 IESRIEKGNPVVGMETTVFVHGLPRKEAIELFRRAKEISREKGFQLVVIGILKGKIIVGMSEEELETMMREG--ADKIGTREIPIAVAKGKNAATTVSATIFLSRRIGIEVVVTGGTGGVH---PGRVDVSQDLTEMASSRTILVSSGIKSILDVEATFEMLETLEIPLVGFKTDEFPLFFSRKSGRRVP-RVESVEEVLKIYETMREIGFEKTLMVLNPVPEEYEVPHDEIERLLEKIELEAEGK--EVTPFLLKKLAE 254
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_THESQ (Pseudouridine-5'-phosphate glycosidase OS=Thermotoga sp. (strain RQ2) GN=psuG PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.157e-36 Identity = 91/246 (36.99%), Postives = 138/246 (56.10%), Query Frame = 1 Query: 136 VSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQSALREAREK 873 + + G VV +E+T+ HG+P + E + + I R G A I IL+G G+S EELE + + G A K R+I VVA N ATTVSAT+F + +GI V VTGG GGVH +D+S DL E+ + +VS+GIKSILD+ T E LET + + ++T+EFP FF+ SG +VP RV++ E+ ++ + +++L +++ P+P E+ IE ++ E K Sbjct: 3 IESRIEKGKPVVGMETTVFVHGLPRKEAIELFRRAKEISREKGFQLAVIGILKGKIVAGMSEEELEAMMREG--ADKVGTREIPIVVAEGKNAATTVSATIFLSRRIGIEVVVTGGTGGVH---PGRVDVSQDLTEMSSSRAILVSSGIKSILDVEATFEMLETLEIPLIGFRTDEFPLFFSRKSGRRVP-RVENVEEVLKIYETMKEIELEKTLMVLNPVPEEYEVPHDEIERLLEKIELEVEGK 242
BLAST of DY258036 vs. ExPASy Swiss-Prot
Match: PSUG_THENN (Pseudouridine-5'-phosphate glycosidase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=psuG PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.847e-35 Identity = 88/238 (36.97%), Postives = 131/238 (55.04%), Query Frame = 1 Query: 136 VSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRRGEHTMDISSDLKELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCVAAYKTNEFPAFFTETSGSKVPCRVDSPEDCARLIDVNMKLKLGSGIVIGVPIPREHAAFGRVIESAIQS 849 V L V +E+T+ HG+P + E ++ + I G A + +L+G +G++ +EL + GS +K R+I +A N ATTVSAT+F GI V VTGG GGVH G +DIS DL E+ + + +VS+GIKSILD+ T E LET + V + T+EFP FF+ SG KV RV++ E+ R+ +LKL +++ P+P EH IE +++ Sbjct: 3 VENRLEKEKPAVGMETTVFVHGLPRKEAIELFRKAKKISEEMGFQLAVVGVLKGKIILGMNEDELTIMMNEGS--EKIGTREIPIALAKGMNAATTVSATIFLCKRFGIDVVVTGGTGGVHPGG---VDISQDLTEMASSRIILVSSGIKSILDVDATFEMLETLEIPVVGFMTDEFPLFFSRKSGKKVK-RVENVEEILRIYRTMEELKLEKTLMVLNPVPEEHEVPREEIEHLLEN 234 HSP 2 Score: 24.6386 bits (52), Expect = 1.847e-35 Identity = 10/29 (34.48%), Postives = 18/29 (62.07%), Query Frame = 3 Query: 876 ITGNAETPFLLARVNDLTGGFSLPQTFAL 962 + G TP+LL ++ ++TGG +L +L Sbjct: 239 VEGKDVTPYLLRKLVEITGGRTLKANLSL 267 The following BLAST results are available for this feature:
BLAST of DY258036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258036 ID=DY258036; Name=DY258036; organism=Citrus clementina; type=EST; length=1172bpback to top |