DY258037

Overview
NameDY258037
Unique NameDY258037
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP1A5_CHICK (Cytochrome P450 1A5 OS=Gallus gallus GN=CYP1A5 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.503e-11
Identity = 49/168 (29.17%), Postives = 77/168 (45.83%), Query Frame = 2
Query:   89 LMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFI--ENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGV 586
            L+  P + +K+QAE+ + +  ++    SD   L Y  A + E               T     ++GY IP+   +  N W V  D +LW++P++F PERF+  E     K    +   FG G+R C G N G   V L L+ LL    + +  G    + DMT  +G+
Sbjct:  342 LVTYPHMQKKIQAELDQTIGRERRPRLSDRGMLPYTEAFILEMFRHSSFMPFTIPHSTTRDTVLNGYYIPKDRCVFINQWQVNHDEKLWKDPQAFNPERFLNAEGTEVNKVDAEKVMTFGLGKRRCIGENIGKWEVFLFLSTLLQQLEFSIQDG---KKADMTPIYGL 506          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP1A1_STECH (Cytochrome P450 1A1 OS=Stenotomus chrysops GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.503e-11
Identity = 50/201 (24.88%), Postives = 85/201 (42.29%), Query Frame = 2
Query:    5 QDIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFI--ENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRK 601
            + I  ++  +F  G              L+  P++ E++  E+ E +   +    SD   L ++ A + E               T +   ++GY IP+ T +  N W +  D +LW++P SF P+RF+  +     K    +   FG G+R C G     + V L LA L+    +   PG     LDMT ++G+    K
Sbjct:  310 EKIVGIVNDLFGAGFDTISTALSWSVMYLVAYPEIQERLYQEMNETVGPDRTPCLSDKPKLPFLEAFILETFRHSSFLPFTIPHCTSKDTSLNGYFIPKDTCVFINQWQINHDAELWKDPSSFNPDRFLNADGTEVNKLEGEKMMVFGMGKRRCIGEVIARSEVFLFLAILVQNLRFHSMPG---EPLDMTPEYGLTMKHK 507          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP4F6_RAT (Cytochrome P450 4F6 OS=Rattus norvegicus GN=Cyp4f6 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 55/199 (27.64%), Postives = 92/199 (46.23%), Query Frame = 2
Query:    8 DIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKK--EIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERF-IENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPH---ELDMTAKFGV 586
            DI+A   +   GG              L R+P+  E+ + E+RE L+ ++  EI   D+  L ++   +KE+              + + +  DG VIP+    + + + V  +P +W +PE + P RF  ENP   K +   F PF +G R C G  F ++ +++ LA  L  F   LP   +P    EL + A+ G+
Sbjct:  317 DIRAEADTFMFGGHDTTASALSWILYNLARHPEYQERCRQEVRELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPVLLISRCCSQDIVLPDGRVIPKGNICVISIFGVHHNPSVWPDPEVYNPFRFDPENP--QKRSPLAFIPFSAGPRNCIGQTFAMSEIKVALALTLLRF-CVLPDDKEPRRKPELILRAEGGL 512          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP2K1_ONCMY (Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2k1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 47/167 (28.14%), Postives = 79/167 (47.31%), Query Frame = 2
Query:   89 LMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPL--AKLLYFFNWQLPPGMQPHELDMTAKFG 583
            + + P + ++VQ EI  ++ G ++    D ++L Y  AV+ E               T   +   GY I + T ++    +V +D   WE+P +F P  F++    +   +  F  F +GRR+C G   G+A +EL L    LL  F +  PPG+   +LD+T   G
Sbjct:  326 MTKYPHIQDQVQEEI-SRVIGSRQTLVEDRKNLPYTDAVIHETQRLANIVPMSVPHTTSRDVTFQGYFIKKGTSVIPLLTSVLQDDSEWESPNTFNPSHFLDEQGGFVKRD-AFMAFSAGRRVCLGE--GLARMELFLFFTSLLQRFRFSPPPGVTEDDLDLTPLLG 488          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP2DK_MESAU (Cytochrome P450 2D20 OS=Mesocricetus auratus GN=CYP2D20 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 58/212 (27.36%), Postives = 89/212 (41.98%), Query Frame = 2
Query:    5 QDIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKG---TNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPY 631
            +++  V+  +F  G              ++ +P V  +VQ EI + +   +    +D   + Y  AV+ E               T   +EV G++IP+ T ++ N  +V +D  +WE P  F PE F    LD +G       F PF +GRR C G       + L    LL  F++ +P G QP   D     GV       L + PTPY
Sbjct:  296 ENLHVVVADLFIAGMVTTSTTLSWALLLMILHPDVQSRVQQEIDDVIGQVRRPEMADQARMPYTNAVIHEVQRFGDIAPVNVPHMTSRDVEVQGFLIPKGTTLIPNLSSVLKDETVWEKPLHFHPEHF----LDAQGRFVKQEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPAG-QPRPSDQ----GVFA-----LPVTPTPY 493          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP2DI_RAT (Cytochrome P450 2D18 OS=Rattus norvegicus GN=Cyp2d18 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 46/180 (25.56%), Postives = 80/180 (44.44%), Query Frame = 2
Query:    5 QDIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPG 544
            ++++ V+  +F  G              ++  P V  +VQ EI E +   +    +D   + +  AV+ E              +T   IEV G++IP+ T ++ N  +V +D  +WE P  F PE F++   ++   +  F PF +GRR C G       + L    LL  F++ +P G
Sbjct:  296 ENLRVVVADLFMAGMVTTSTTLTWALLFMILRPDVQCRVQQEIDEVIGQVRRPEMADQARMPFTNAVIHEVQRFADILPLGVPHKTSRDIEVQGFLIPKGTTLIINLSSVLKDETVWEKPLRFHPEHFLDAQGNFV-KHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPAG 474          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP2C5_RABIT (Cytochrome P450 2C5 OS=Oryctolagus cuniculus GN=CYP2C5 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 45/162 (27.78%), Postives = 79/162 (48.77%), Query Frame = 2
Query:   89 LMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTA 574
            L+++P+V  +VQ EI   +   +     D   + Y  AV+ E                   +    Y IP+ T I+ +  +V  D + + NP+ F P  F++   ++K ++Y F PF +G+R+C G   G+A +EL L       N++L   ++P +LD+TA
Sbjct:  310 LLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKRMCVGE--GLARMELFLFLTSILQNFKLQSLVEPKDLDITA 468          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP2B3_RAT (Cytochrome P450 2B3 OS=Rattus norvegicus GN=Cyp2b3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 47/163 (28.83%), Postives = 75/163 (46.01%), Query Frame = 2
Query:   89 LMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAK 577
            +++ P V EKVQ EI + +  ++     D   + Y  AV+ E                 +     GY++P+ T++ F   +   DPQ +E P++F PE F++     K     F PF  G+R+C G   GIA  EL L       N+ +   + P+ +DMT K
Sbjct:  314 MLKYPHVAEKVQKEIDQVIGSQRVPTLDDRSKMPYTEAVIHEIQRFSDVSPMGLPCRITKDTLFRGYLLPKNTEVYFILSSALHDPQYFEQPDTFNPEHFLDANGALKKCE-AFMPFSIGKRMCLGE--GIARSELFLFFTTILQNYSVSSPVDPNTIDMTPK 473          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP1A2_RAT (Cytochrome P450 1A2 OS=Rattus norvegicus GN=Cyp1a2 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 51/196 (26.02%), Postives = 84/196 (42.86%), Query Frame = 2
Query:    5 QDIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFI--ENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGV 586
            + I  ++  +F  G              L+  PKV  K+  E+   +   ++   SD   L Y+ A + E               T     ++G+ IP+   I  N W V  D + W++P  F PERF+  +N    K  + +   FG G+R C G       V L LA LL+   + +PPG+   ++D+T  +G+
Sbjct:  303 EKIVNIVNDIFGAGFETVTTAIFWSILLLVTEPKVQRKIHEELDTVIGRDRQPRLSDRPQLPYLEAFILEIYRYTSFVPFTIPHSTTRDTSLNGFHIPKECCIFINQWQVNHDEKQWKDPFVFRPERFLTNDNTAIDKTLSEKVMLFGLGKRRCIGEIPAKWEVFLFLAILLHQLEFTVPPGV---KVDLTPSYGL 495          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP1A1_MESAU (Cytochrome P450 1A1 OS=Mesocricetus auratus GN=CYP1A1 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 52/191 (27.23%), Postives = 79/191 (41.36%), Query Frame = 2
Query:   20 VIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFI--ENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGV 586
            +I  +F  G              L+ NP V  K+Q E+   +   +     D   L Y+ A + E               T     + G+ IP+   +  N W +  + +LW +P  F PERF+     LD K  + + T FG G+R C G   G   V L LA LL    + + PG    ++DMT  +G+
Sbjct:  314 IIVDLFGAGFDTVTTAISWSLMYLVTNPGVQRKIQEELDTVIGRSRRPRLCDRSQLPYLEAFILETFRHSSFLPFTIPHSTTRDTSLCGFYIPKGHCVFVNQWQINHNQELWGDPNKFRPERFLTSSGTLD-KVLSGKVTLFGLGKRKCIGETIGRLEVFLFLAILLQQIEFTVSPG---EKVDMTPIYGL 500          
The following BLAST results are available for this feature:
BLAST of DY258037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
CP1A5_CHICK1.503e-1129.17Cytochrome P450 1A5 OS=Gallus gallus GN=CYP1A5 PE=... [more]
CP1A1_STECH1.503e-1124.88Cytochrome P450 1A1 OS=Stenotomus chrysops GN=cyp1... [more]
CP4F6_RAT1.963e-1127.64Cytochrome P450 4F6 OS=Rattus norvegicus GN=Cyp4f6... [more]
CP2K1_ONCMY1.963e-1128.14Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2... [more]
CP2DK_MESAU1.963e-1127.36Cytochrome P450 2D20 OS=Mesocricetus auratus GN=CY... [more]
CP2DI_RAT1.963e-1125.56Cytochrome P450 2D18 OS=Rattus norvegicus GN=Cyp2d... [more]
CP2C5_RABIT1.963e-1127.78Cytochrome P450 2C5 OS=Oryctolagus cuniculus GN=CY... [more]
CP2B3_RAT1.963e-1128.83Cytochrome P450 2B3 OS=Rattus norvegicus GN=Cyp2b3... [more]
CP1A2_RAT1.963e-1126.02Cytochrome P450 1A2 OS=Rattus norvegicus GN=Cyp1a2... [more]
CP1A1_MESAU1.963e-1127.23Cytochrome P450 1A1 OS=Mesocricetus auratus GN=CYP... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DA01ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258037 ID=DY258037; Name=DY258037; organism=Citrus clementina; type=EST; length=761bp
TACCCAAGACATCAAAGCTGTCATCTGGAGTGTATTTGCTGGTGGAACGG
ACACTTCATCAACTACAACATTATGGACTATGTCGGAGTTGATGAGAAAT
CCTAAAGTGATGGAGAAGGTACAAGCTGAGATAAGAGAAAAGCTCAAGGG
GAAGAAAGAAATCTATGAGTCAGATATTCAGGATTTACACTATATGAGGG
CAGTCCTCAAAGAAGCTCTAAGACTAAGGATTCCAGGTCCCTTATTGCTC
CCAAGAGAAACCATGGAGCCAATTGAGGTTGATGGTTACGTAATTCCAGA
AAGAACCAAAATACTTTTCAATGCTTGGGCAGTAACAAGAGATCCCCAAC
TTTGGGAGAATCCTGAGAGCTTTATTCCAGAAAGGTTCATAGAAAATCCC
CTGGATTACAAGGGAACTAACTATGAATTCACACCATTTGGATCAGGAAG
AAGGATTTGTCCAGGCATGAATTTTGGTATAGCCAATGTAGAGCTTCCAT
TGGCTAAACTACTCTACTTCTTTAATTGGCAGCTCCCTCCTGGGATGCAA
CCACATGAACTTGATATGACTGCAAAATTTGGTGTGGTTTGCGGTAGAAA
GAATGACTTGTTTCTGATTCCTACTCCTTACAATAATATTCCGTGAGGGA
TGCAATGACTTTGTTGTAAGATATATTGTGCGGCCACATGATACCAATTT
ATGATATAATGGGTGTAATAAATACAAAAGAAAGTGGATCAATCAAAATC
CTGTTTGTGAA
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