DY258037

Overview
NameDY258037
Unique NameDY258037
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP1A1_DICLA (Cytochrome P450 1A1 OS=Dicentrarchus labrax GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 49/201 (24.38%), Postives = 88/201 (43.78%), Query Frame = 2
Query:    5 QDIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFI--ENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRK 601
            + I  ++  +F  G              L+  P++ E++  E++E +   +     D  +L ++ A + E               T +   ++GY IP+ T +  N W +  DP+LW++P SF P+RF+  +     K    +   FG G+R C G       V L LA ++   +++  PG     LDMT ++G+    K
Sbjct:  311 EKIVGIVNDLFGAGFDTISTALSWSVMYLVAYPEIEERLYQELKENVGLDRTPLLCDRPNLPFLEAFILEIFRHSSFLPFTIPHCTSKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLSADGTELNKLEGEKVMVFGLGKRRCIGEVIARNGVFLFLAIIVQKLHFKTLPG---EPLDMTPEYGLTMKHK 508          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: C85A_PHAVU (Cytochrome P450 85A OS=Phaseolus vulgaris GN=BA13 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11
Identity = 44/148 (29.73%), Postives = 76/148 (51.35%), Query Frame = 2
Query:   98 NPKVMEKVQAE---IREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQ 532
            +PKV+E+++ E   IRE+ K +  I  +D++ + + RAV+ E              +T   +E++GY+IP+  +I      +  DP L+ +P +F P R++ N L+   +   F  FG G R CPG   GIA +   L   +  + W+
Sbjct:  295 HPKVLEEIRKEHFAIRERKKPEDPIDCNDLKSMRFTRAVIFETSRLATIVNGVLR-KTTHDMELNGYLIPKGWRIYVYTREINYDPFLYHDPLTFNPWRWLGNSLE---SQSHFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWE 438          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP2M1_ONCMY (Cytochrome P450 2M1 OS=Oncorhynchus mykiss GN=cyp2m1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.564e-11
Identity = 48/157 (30.57%), Postives = 72/157 (45.86%), Query Frame = 2
Query:   26 WSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVEL 496
            WS+FA G              +++ P + E VQ EI E +  +    +  ++ + Y  AV+ E              + M   E   Y IPE T +L    +V  DP+L++NP+ F PE F++    +K  N  F  FG G+R CPG    +A VEL
Sbjct:  299 WSLFAAGTETTSSTLRQSFLMMIKYPHIQESVQKEIDEVIGSRVPTVDDRVK-MPYTDAVIHEVQRYMDLSPTSVPHKVMRDTEFYNYHIPEGTMVLPLLSSVLVDPKLFKNPDEFDPENFLDENGVFK-KNDGFFAFGVGKRACPGE--ALARVEL 451          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP2E1_MACFA (Cytochrome P450 2E1 (Fragment) OS=Macaca fascicularis GN=CYP2E1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.564e-11
Identity = 46/161 (28.57%), Postives = 77/161 (47.83%), Query Frame = 2
Query:   89 LMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMT 571
            LM+ P++ EK+  EI   +   +     D Q++ YM AV+ E              E        GY+IP+ T I+    +V    Q + +PE F PE  ++    +K ++Y F PF +G+R+C G       + L L+ +L  FN  L P + P ++D++
Sbjct:  271 LMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMHAVVHEIQRFITLVPSNLPHEATRDTIFRGYIIPKGTVIVPTLDSVLYHNQEFPDPEKFKPEHLVDESGKFKYSDY-FKPFSAGKRVCAGEGLARMELFLLLSAILQHFN--LKPLVDPKDIDIS 428          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP2D6_HUMAN (Cytochrome P450 2D6 OS=Homo sapiens GN=CYP2D6 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.564e-11
Identity = 46/180 (25.56%), Postives = 77/180 (42.78%), Query Frame = 2
Query:    5 QDIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPG 544
            ++++ V+  +F+ G              ++ +P V  +VQ EI + +   +     D   + Y  AV+ E               T   IEV G+ IP+ T ++ N  +V +D  +WE P  F PE F++    +      F PF +GRR C G       + L    LL  F++ +P G
Sbjct:  293 ENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPE-AFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG 471          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP270_MOUSE (Cytochrome P450 2C70 OS=Mus musculus GN=Cyp2c70 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.564e-11
Identity = 45/159 (28.30%), Postives = 77/159 (48.43%), Query Frame = 2
Query:   89 LMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELD 565
            L++ P+V  K+Q EI   +   +     D   + Y  AVL E              +T + +E  GY IP+ T ++    +V  D + + NPE F P  F++   ++K ++Y F  F +GRR C G   G+A +E+ L       ++ L P ++P ++D
Sbjct:  312 LLKYPEVTAKIQEEIAHVIGRHRRPTMQDRNHMPYTDAVLHEIQRYIDFVPIPSPRKTTQDVEFRGYHIPKGTSVMACLTSVLNDDKEFPNPEKFDPGHFLDEKGNFKKSDY-FVAFSAGRRACIGE--GLARMEMFLILTNILQHFTLKPLVKPEDID 467          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP239_MOUSE (Cytochrome P450 2C39 OS=Mus musculus GN=Cyp2c39 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.564e-11
Identity = 49/188 (26.06%), Postives = 86/188 (45.74%), Query Frame = 2
Query:    5 QDIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDM 568
            +++   I ++FA G              LM+ P V  KVQ EI   +   +     D   + Y  A++ E                   I+   Y+IP+ T ++ +  +V  D + + NPE F P  F++   ++K +++ F PF +G+R+C G   G+A +EL L       N++L P + P ++DM
Sbjct:  285 ENLACTINNLFAAGTETTSTTLRYALLLLMKYPDVTAKVQEEIDHVIGRHRSPCMQDRNHMPYTDAMIHEVQRFINLVPNNIPRAVTCDIKFRNYLIPKGTTVVTSLTSVLHDSKEFPNPELFDPGHFLDANGNFKKSDH-FMPFSAGKRVCAGE--GLARMELFLFLTTILQNFKLKPLVHPKDIDM 469          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP17A_CAVPO (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Cavia porcellus GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.564e-11
Identity = 49/190 (25.79%), Postives = 79/190 (41.58%), Query Frame = 2
Query:   11 IKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGT-----NYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELD 565
            I   +  +F  G              L+ NP+V +K+Q EI   +   +    SD   L  + A ++E              +      +  + I + T +L N WA+  + Q W+ P+ F+PERF    LD  G+     +  + PFG+G R C G       + L  A LL  F+ ++P G Q   L+
Sbjct:  292 ILTTLGDIFGAGVETSSSVVLWVIAFLLHNPQVKKKIQEEIDHNVGFSRTPTFSDRNHLLMLEATIREVLRIRPVAPILIPHKANTDSSIGEFAIDKDTNVLVNLWALHHNEQEWDRPDQFMPERF----LDPTGSQIIVPSSSYLPFGAGPRSCVGEALARQEIFLITAWLLQKFDLEVPEGGQLPSLE 477          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP2J3_RAT (Cytochrome P450 2J3 OS=Rattus norvegicus GN=Cyp2j3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.349e-11
Identity = 43/146 (29.45%), Postives = 68/146 (46.58%), Query Frame = 2
Query:  101 PKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLP 538
            P+V EK+QAEI   +   ++   +D   + Y  AV+ E              E      + G+ +P+ T IL N  A+ RDP+ W  P++F PE F+EN    K     F PF  G+R C G     + + + +  L+  F ++ P
Sbjct:  331 PEVQEKMQAEIDRVIGQGRQPNLADRDSMPYTNAVIHEVQRIGNIIPFNVPREVAVDTYLAGFNLPKGTMILTNLTALHRDPKEWATPDTFNPEHFLENGQFKK--RESFLPFSMGKRACLGEQLARSELFIFITSLIQKFTFKPP 474          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP2DP_PIG (Vitamin D(3) 25-hydroxylase OS=Sus scrofa GN=CYP2D25 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 3.349e-11
Identity = 60/212 (28.30%), Postives = 92/212 (43.40%), Query Frame = 2
Query:    5 QDIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKG--TNYE-FTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPTPY 631
            ++++ V+  +F+ G              ++ +P V  +VQ EI E +   ++    D   + +  AVL E               T   IEV G++IP+ T ++ N  +V +D  +W+ P  F PE F    LD +G  T  E F PF +GRR C G       + L    LL  F++ +P G QP   D     GV         L P+PY
Sbjct:  296 ENLRLVVAHLFSAGMITTSTTLAWALLLMILHPDVQRRVQQEIDEVIGHVRQPEIKDQALMPFTLAVLHEVQRFGDIVPLGVAHMTSCDIEVQGFLIPKGTTLITNLTSVLKDETVWKKPFRFYPEHF----LDAQGRFTKQEAFMPFSAGRRSCLGEPLARMELFLFFTTLLQAFSFSVPTG-QPCPSD----HGVFA-----FLLFPSPY 493          
The following BLAST results are available for this feature:
BLAST of DY258037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
CP1A1_DICLA1.963e-1124.38Cytochrome P450 1A1 OS=Dicentrarchus labrax GN=cyp... [more]
C85A_PHAVU1.963e-1129.73Cytochrome P450 85A OS=Phaseolus vulgaris GN=BA13 ... [more]
CP2M1_ONCMY2.564e-1130.57Cytochrome P450 2M1 OS=Oncorhynchus mykiss GN=cyp2... [more]
CP2E1_MACFA2.564e-1128.57Cytochrome P450 2E1 (Fragment) OS=Macaca fascicula... [more]
CP2D6_HUMAN2.564e-1125.56Cytochrome P450 2D6 OS=Homo sapiens GN=CYP2D6 PE=1... [more]
CP270_MOUSE2.564e-1128.30Cytochrome P450 2C70 OS=Mus musculus GN=Cyp2c70 PE... [more]
CP239_MOUSE2.564e-1126.06Cytochrome P450 2C39 OS=Mus musculus GN=Cyp2c39 PE... [more]
CP17A_CAVPO2.564e-1125.79Steroid 17-alpha-hydroxylase/17,20 lyase OS=Cavia ... [more]
CP2J3_RAT3.349e-1129.45Cytochrome P450 2J3 OS=Rattus norvegicus GN=Cyp2j3... [more]
CP2DP_PIG3.349e-1128.30Vitamin D(3) 25-hydroxylase OS=Sus scrofa GN=CYP2D... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DA01ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258037 ID=DY258037; Name=DY258037; organism=Citrus clementina; type=EST; length=761bp
TACCCAAGACATCAAAGCTGTCATCTGGAGTGTATTTGCTGGTGGAACGG
ACACTTCATCAACTACAACATTATGGACTATGTCGGAGTTGATGAGAAAT
CCTAAAGTGATGGAGAAGGTACAAGCTGAGATAAGAGAAAAGCTCAAGGG
GAAGAAAGAAATCTATGAGTCAGATATTCAGGATTTACACTATATGAGGG
CAGTCCTCAAAGAAGCTCTAAGACTAAGGATTCCAGGTCCCTTATTGCTC
CCAAGAGAAACCATGGAGCCAATTGAGGTTGATGGTTACGTAATTCCAGA
AAGAACCAAAATACTTTTCAATGCTTGGGCAGTAACAAGAGATCCCCAAC
TTTGGGAGAATCCTGAGAGCTTTATTCCAGAAAGGTTCATAGAAAATCCC
CTGGATTACAAGGGAACTAACTATGAATTCACACCATTTGGATCAGGAAG
AAGGATTTGTCCAGGCATGAATTTTGGTATAGCCAATGTAGAGCTTCCAT
TGGCTAAACTACTCTACTTCTTTAATTGGCAGCTCCCTCCTGGGATGCAA
CCACATGAACTTGATATGACTGCAAAATTTGGTGTGGTTTGCGGTAGAAA
GAATGACTTGTTTCTGATTCCTACTCCTTACAATAATATTCCGTGAGGGA
TGCAATGACTTTGTTGTAAGATATATTGTGCGGCCACATGATACCAATTT
ATGATATAATGGGTGTAATAAATACAAAAGAAAGTGGATCAATCAAAATC
CTGTTTGTGAA
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