DY258037

Overview
NameDY258037
Unique NameDY258037
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP2CF_RABIT (Cytochrome P450 2C15 (Fragment) OS=Oryctolagus cuniculus GN=CYP2C15 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.349e-11
Identity = 46/162 (28.40%), Postives = 79/162 (48.77%), Query Frame = 2
Query:   89 LMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTA 574
            L+++P+V  KVQ EI   +   +     D   + Y  AV+ E                   I+   Y IP+   I+ +  +V  D + + NP+ F P  F++   ++K ++Y F PF +G+R+C G   G+A +EL L       N++L   ++P +LD+TA
Sbjct:  201 LLKHPEVAAKVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRYIDLIPINLPHAVTRDIKFRNYFIPKGMNIITSLTSVLHDEKEFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKRMCVGE--GLARMELFLFLTSILQNFKLQSLVEPKDLDITA 359          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP270_RAT (Cytochrome P450 2C70 OS=Rattus norvegicus GN=Cyp2c70 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.349e-11
Identity = 45/161 (27.95%), Postives = 76/161 (47.20%), Query Frame = 2
Query:   89 LMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMT 571
            L++ P+V  K+Q EI   +   +     D   + Y  AVL E              +T + +E  GY IP+ T ++    +   D + + NPE F P  F++   ++K ++Y F  F +GRR C G   G+A +E+ L       ++ L P + P ++D T
Sbjct:  312 LLKYPEVTAKIQEEITRVIGRHRRPCMQDRNHMPYTDAVLHEIQRYIDFVPIPLPRKTTQDVEFRGYHIPKGTSVMACLTSALHDDKEFPNPEKFDPGHFLDEKGNFKKSDY-FMAFSAGRRACIGE--GLARMEMFLILTSILQHFTLKPLVNPEDIDTT 469          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP17A_ONCMY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oncorhynchus mykiss GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.349e-11
Identity = 47/194 (24.23%), Postives = 81/194 (41.75%), Query Frame = 2
Query:   23 IWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNY-----EFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVV 589
            +  +F  G              L+ +P+V +++Q E+   + G +    SD   L Y+ A ++E                     +  + + +  +I+ N W++  D + W+NPE F P RF    L+ +GT        + PFG+G R+C G       + L L+ +L      + PG     L+   KFGVV
Sbjct:  303 VGDIFGAGVETTSTVLKWAIAYLIHHPQVQQRIQEELDSVVGGDRTPQLSDRGSLPYLEATIREVLRIRPVAPLLIPHVAQTDTSIGKFTVRKGARIIINLWSLHHDEKEWKNPEMFDPGRF----LNEEGTGLCIPSPSYLPFGAGVRVCLGEALAKMEIFLFLSWILQRLTMTVSPGQPLPSLE--GKFGVV 490          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP2C9_HUMAN (Cytochrome P450 2C9 OS=Homo sapiens GN=CYP2C9 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 4.373e-11
Identity = 48/161 (29.81%), Postives = 74/161 (45.96%), Query Frame = 2
Query:   89 LMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMT 571
            L+++P+V  KVQ EI   +   +     D   + Y  AV+ E                   I+   Y+IP+ T IL +  +V  D + + NPE F P  F++   ++K + Y F PF +G+RIC G    +A +EL L       N+ L   + P  LD T
Sbjct:  313 LLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICVGE--ALAGMELFLFLTSILQNFNLKSLVDPKNLDTT 470          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP242_PIG (Cytochrome P450 2C42 (Fragment) OS=Sus scrofa GN=CYP2C42 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.373e-11
Identity = 50/189 (26.46%), Postives = 85/189 (44.97%), Query Frame = 2
Query:    5 QDIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMT 571
            +++ A +  +F+ G              L+++P+V  KVQ EI   +   +     D   + Y  AV+ E                   I+   Y+IP+ T IL +  +V  D + + NPE F P  F++   ++K ++Y F PF +G+RIC G   G+A +EL L        + L   + P ++D T
Sbjct:  122 ENLIATVSDMFSAGTETTSTTMRYGLLLLLKHPEVTAKVQEEIDRVIGRHRSACMQDRSHMPYTDAVVHEIQRYIDLVPTNLPHAVTCDIKFRNYLIPKGTTILTSLTSVLYDCKAFPNPEVFDPGHFLDESGNFKKSDY-FMPFSTGKRICVGE--GLARMELFLFLTTILQKFNLKSVVDPKDIDTT 307          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP2D6_PANTR (Cytochrome P450 2D6 OS=Pan troglodytes GN=CYP2D6 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.712e-11
Identity = 46/180 (25.56%), Postives = 76/180 (42.22%), Query Frame = 2
Query:    5 QDIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPG 544
            ++++ V+  +F+ G              ++ +P V  +VQ EI + +   +     D   + Y  AV+ E               T   IEV G+ IP+ T +  N  +V +D  +WE P  F PE F++    +      F PF +GRR C G       + L    LL  F++ +P G
Sbjct:  293 ENLRIVVADLFSAGIVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQARMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLFTNLSSVLKDKAVWEKPFRFHPEHFLDAQGHFVKPE-AFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG 471          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP2D6_PANPA (Cytochrome P450 2D6 OS=Pan paniscus GN=CYP2D6 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.712e-11
Identity = 46/180 (25.56%), Postives = 76/180 (42.22%), Query Frame = 2
Query:    5 QDIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPG 544
            ++++ V+  +F+ G              ++ +P V  +VQ EI + +   +     D   + Y  AV+ E               T   IEV G+ IP+ T +  N  +V +D  +WE P  F PE F++    +      F PF +GRR C G       + L    LL  F++ +P G
Sbjct:  293 ENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQARMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLFTNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPE-AFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG 471          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP2BJ_MOUSE (Cytochrome P450 2B19 OS=Mus musculus GN=Cyp2b19 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.712e-11
Identity = 52/188 (27.66%), Postives = 82/188 (43.62%), Query Frame = 2
Query:    5 QDIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDM 568
            Q++   + S+F  G              +++ P V EKVQ EI + +   +     D   + Y  AV+ E              +  +     GY+IP+ T++     +   DP+ +E P+SF PE F++     K TN  F PF +G+RIC G   GIA  EL L       N+ L   + P  +D+
Sbjct:  287 QNLVISVLSLFFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFTDLAPIGLPHKVTKDTLFRGYLIPKNTEVYPILSSALHDPRYFEQPDSFNPEHFLDANGALK-TNEAFMPFSTGKRICLGE--GIARNELFLFFTTILQNFSLASPVAPENIDL 471          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP1A1_LIZSA (Cytochrome P450 1A1 OS=Liza saliens GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.712e-11
Identity = 49/201 (24.38%), Postives = 85/201 (42.29%), Query Frame = 2
Query:    5 QDIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFI--ENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRK 601
            + +  ++  +F  G              L+  P++ E +  E++E +   +    SD  +L  + + + E               T +   ++GY IP+ T +  N W +  DP+LW+ P SF P+RF+  +     K    +   FG G+R C G       V L LA L+   ++   PG     LDMT ++G+    K
Sbjct:  310 EKVVGIVNDLFGAGFDTISTALSWSVMYLVAYPEIQEXLYQELKENVGLDRTPVLSDRNNLPLLESFILEIFRHSSFLPFTIPHCTTKDTSLNGYYIPKDTCVFINQWQINHDPELWKEPSSFNPDRFLSADGTEVNKVDGEKVMIFGMGKRRCIGEVIARNEVYLFLAILIQKLHFCNLPG---EPLDMTPEYGLTMKHK 507          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP27A_RABIT (Sterol 26-hydroxylase, mitochondrial OS=Oryctolagus cuniculus GN=CYP27A1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 46/182 (25.27%), Postives = 84/182 (46.15%), Query Frame = 2
Query:   89 LMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFI-ENPLDYKGTNYEF--TPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGVVCGRKNDLFLIPT 625
            L +NP++   ++ E+   +   +     D   +  ++AVLKE                 + IEV G++ P+ T+ +F  +  +RDP  +  P++F P R++ +   +   T + F   PFG G R C G       ++L LA+L+  +   L P  +  E+   A+  +V  +K  L  +PT
Sbjct:  354 LSKNPEIQAALRKEVVGVVAAGQVPQHKDFAHMPLLKAVLKETLRLYPVIPANSRIIVDKEIEVGGFLFPKNTQFVFCHYVTSRDPSTFSEPDTFWPYRWLRKGQPETSKTQHPFGSVPFGYGVRACLGRRIAELEMQLLLARLIQRYELMLAP--ETGEVQSVARIVLVPNKKVGLRFLPT 533          
The following BLAST results are available for this feature:
BLAST of DY258037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
CP2CF_RABIT3.349e-1128.40Cytochrome P450 2C15 (Fragment) OS=Oryctolagus cun... [more]
CP270_RAT3.349e-1127.95Cytochrome P450 2C70 OS=Rattus norvegicus GN=Cyp2c... [more]
CP17A_ONCMY3.349e-1124.23Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oncorh... [more]
CP2C9_HUMAN4.373e-1129.81Cytochrome P450 2C9 OS=Homo sapiens GN=CYP2C9 PE=1... [more]
CP242_PIG4.373e-1126.46Cytochrome P450 2C42 (Fragment) OS=Sus scrofa GN=C... [more]
CP2D6_PANTR5.712e-1125.56Cytochrome P450 2D6 OS=Pan troglodytes GN=CYP2D6 P... [more]
CP2D6_PANPA5.712e-1125.56Cytochrome P450 2D6 OS=Pan paniscus GN=CYP2D6 PE=3... [more]
CP2BJ_MOUSE5.712e-1127.66Cytochrome P450 2B19 OS=Mus musculus GN=Cyp2b19 PE... [more]
CP1A1_LIZSA5.712e-1124.38Cytochrome P450 1A1 OS=Liza saliens GN=cyp1a1 PE=2... [more]
CP27A_RABIT7.460e-1125.27Sterol 26-hydroxylase, mitochondrial OS=Oryctolagu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DA01ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258037 ID=DY258037; Name=DY258037; organism=Citrus clementina; type=EST; length=761bp
TACCCAAGACATCAAAGCTGTCATCTGGAGTGTATTTGCTGGTGGAACGG
ACACTTCATCAACTACAACATTATGGACTATGTCGGAGTTGATGAGAAAT
CCTAAAGTGATGGAGAAGGTACAAGCTGAGATAAGAGAAAAGCTCAAGGG
GAAGAAAGAAATCTATGAGTCAGATATTCAGGATTTACACTATATGAGGG
CAGTCCTCAAAGAAGCTCTAAGACTAAGGATTCCAGGTCCCTTATTGCTC
CCAAGAGAAACCATGGAGCCAATTGAGGTTGATGGTTACGTAATTCCAGA
AAGAACCAAAATACTTTTCAATGCTTGGGCAGTAACAAGAGATCCCCAAC
TTTGGGAGAATCCTGAGAGCTTTATTCCAGAAAGGTTCATAGAAAATCCC
CTGGATTACAAGGGAACTAACTATGAATTCACACCATTTGGATCAGGAAG
AAGGATTTGTCCAGGCATGAATTTTGGTATAGCCAATGTAGAGCTTCCAT
TGGCTAAACTACTCTACTTCTTTAATTGGCAGCTCCCTCCTGGGATGCAA
CCACATGAACTTGATATGACTGCAAAATTTGGTGTGGTTTGCGGTAGAAA
GAATGACTTGTTTCTGATTCCTACTCCTTACAATAATATTCCGTGAGGGA
TGCAATGACTTTGTTGTAAGATATATTGTGCGGCCACATGATACCAATTT
ATGATATAATGGGTGTAATAAATACAAAAGAAAGTGGATCAATCAAAATC
CTGTTTGTGAA
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