DY258037

Overview
NameDY258037
Unique NameDY258037
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9889 contig Ccv1_Contig9889:4..764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP27A_MOUSE (Sterol 26-hydroxylase, mitochondrial OS=Mus musculus GN=Cyp27a1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 41/156 (26.28%), Postives = 74/156 (47.44%), Query Frame = 2
Query:   89 LMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFI-ENPLDYKGTNYEF--TPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGM 547
            L ++P++ E +  E+   +   K     D   +  ++AV+KE               T +  E++G++ P+ T+ +   + V+RDP ++  P SF P R++ +   D  G  + F   PFG G R C G       ++L L++L+  +   L PGM
Sbjct:  353 LSKSPEIQEALHKEVTGVVPFGKVPQHKDFAHMPLLKAVIKETLRLYPVVPTNSRIITEKETEINGFLFPKNTQFVLCHYVVSRDPSVFPEPNSFQPHRWLRKKEADNPGILHPFGSVPFGYGVRSCLGRRIAELEMQLMLSRLVQKYEIALAPGM 508          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: CP2A7_HUMAN (Cytochrome P450 2A7 OS=Homo sapiens GN=CYP2A7 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.743e-11
Identity = 43/163 (26.38%), Postives = 77/163 (47.24%), Query Frame = 2
Query:   89 LMRNPKVMEKVQAEIREKLKGKKEIYESDIQDLHYMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAK 577
            LM++P+V  KV  EI   +   ++    D   + YM AV+ E                 +  +   + +P+ T++     +V RDP  + NP+ F P+ F+++   +K ++  F PF  G+R C G   G+A +EL L       N++L     P ++D++ K
Sbjct:  317 LMKHPEVEAKVHEEIDRVIGKNRQPKFEDRTKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVFPMLGSVLRDPSFFSNPQDFNPQHFLDDKGQFKKSD-AFVPFSIGKRNCFGE--GLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPK 476          
BLAST of DY258037 vs. ExPASy Swiss-Prot
Match: C5131_DICDI (Probable cytochrome P450 513A1 OS=Dictyostelium discoideum GN=cyp513a1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.743e-11
Identity = 50/186 (26.88%), Postives = 82/186 (44.09%), Query Frame = 2
Query:   86 ELMRNPKVMEKVQAEIREKL-KGKKEIYESDIQDLH------------------YMRAVLKEAXXXXXXXXXXXXXETMEPIEVDGYVIPERTKILFNAWAVTRDPQLWENPESFIPERFIENPLDYKGTNYEFTPFGSGRRICPGMNFGIANVELPLAKLLYFFNWQLPPGMQPHELDMTAKFGV 586
            EL+ NP +  KV  +I++ + + K+   ++D ++                    Y+  V+KE               T E +E++GY I   T+I+ N WA  R+ + +  P+SFIPERFI      +  N     FG G R C G +   + +   LA L+  + +  P    P  L+   KFG+
Sbjct:  314 ELINNPNIQSKVYDDIKQAIIQSKENENQNDNENQEQTEEIITLSFNKYRTLAPYLSMVVKETFRKYPSGTIGLPHVTSEDVELNGYKICAGTQIIQNIWATHRNEKQFSEPDSFIPERFIS---QQQSANSNLIHFGCGVRDCIGKSLADSEIFTMLASLINRYEFTNPNPSTP--LNEIGKFGI 494          
The following BLAST results are available for this feature:
BLAST of DY258037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
CP27A_MOUSE7.460e-1126.28Sterol 26-hydroxylase, mitochondrial OS=Mus muscul... [more]
CP2A7_HUMAN9.743e-1126.38Cytochrome P450 2A7 OS=Homo sapiens GN=CYP2A7 PE=2... [more]
C5131_DICDI9.743e-1126.88Probable cytochrome P450 513A1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DA01ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258037 ID=DY258037; Name=DY258037; organism=Citrus clementina; type=EST; length=761bp
TACCCAAGACATCAAAGCTGTCATCTGGAGTGTATTTGCTGGTGGAACGG
ACACTTCATCAACTACAACATTATGGACTATGTCGGAGTTGATGAGAAAT
CCTAAAGTGATGGAGAAGGTACAAGCTGAGATAAGAGAAAAGCTCAAGGG
GAAGAAAGAAATCTATGAGTCAGATATTCAGGATTTACACTATATGAGGG
CAGTCCTCAAAGAAGCTCTAAGACTAAGGATTCCAGGTCCCTTATTGCTC
CCAAGAGAAACCATGGAGCCAATTGAGGTTGATGGTTACGTAATTCCAGA
AAGAACCAAAATACTTTTCAATGCTTGGGCAGTAACAAGAGATCCCCAAC
TTTGGGAGAATCCTGAGAGCTTTATTCCAGAAAGGTTCATAGAAAATCCC
CTGGATTACAAGGGAACTAACTATGAATTCACACCATTTGGATCAGGAAG
AAGGATTTGTCCAGGCATGAATTTTGGTATAGCCAATGTAGAGCTTCCAT
TGGCTAAACTACTCTACTTCTTTAATTGGCAGCTCCCTCCTGGGATGCAA
CCACATGAACTTGATATGACTGCAAAATTTGGTGTGGTTTGCGGTAGAAA
GAATGACTTGTTTCTGATTCCTACTCCTTACAATAATATTCCGTGAGGGA
TGCAATGACTTTGTTGTAAGATATATTGTGCGGCCACATGATACCAATTT
ATGATATAATGGGTGTAATAAATACAAAAGAAAGTGGATCAATCAAAATC
CTGTTTGTGAA
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