DY258054

Overview
NameDY258054
Unique NameDY258054
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length925
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9905 contig Ccv1_Contig9905:4..928. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: YQ9A_SCHPO (Putative pyridoxal kinase C18.10 OS=Schizosaccharomyces pombe GN=SPCC18.10 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.153e-22
Identity = 65/182 (35.71%), Postives = 101/182 (55.49%), Query Frame = 1
Query:    4 DLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREAC-KILHAAGPAKVVITSINID---GNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLD 537
            DL+  L  +N + Y  +LTG++ +   +  I   V   +  +P ++++ DPVMGD+GK+YV + ++S Y+  ++P A  +TPN FE E LT   I ++ D +    KI    G    +ITS  ++   G LF +G +  E G+ P+ F    P +   FTGTGDL + LLL    KYR+ LD
Sbjct:   71 DLLNALLQDNGIVYDAILTGFVPNHDIIQVIFDCVLAYKKDHPKVLWLLDPVMGDQGKMYVDTNVISTYK-AMIPHAFAITPNAFEVEILTDIVIHTQMDAKRGLEKIYQLYGIQNAIITSFEVEESPGTLFCMG-YSCEHGK-PQLFLYQFPSLSGVFTGTGDLFSGLLLA---KYREELD 246          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_GRABC (Pyridoxamine kinase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=pdxY PE=3 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.721e-22
Identity = 72/225 (32.00%), Postives = 119/225 (52.89%), Query Frame = 1
Query:   52 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAA----GPAKVVITSINI----DGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSE 699
            +L+GY+GS +    IL  V  +R+ NP  +Y CDPV+GD G+ ++V   L  ++R++ VP A++LTPNQFE E LTG    + AD R A K+L  +    GP  +++TS+++     G+L ++     E G+    + +  P +P    G GD + AL L +      +   A E A SS+  LL+RT           ++ S+EI  + ++ +   P   F ++
Sbjct:   77 VLSGYMGSDAIGGAILDAVASVRAANPEALYCCDPVIGDTGRGIFVRPGLPELFRDRAVPTANILTPNQFELEWLTGHHCRTLADARAAVKVLAESMIRQGPRIILVTSLHVAETPSGSLDML---VYENGRF---YLLRTPLLPVSINGAGDAIAALFL-FHRLDTGDARQALEKAASSVYGLLKRTA----------EAGSMEILTVAARQEFLTPSTCFYAQ 284          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_DEIGD (Pyridoxamine kinase OS=Deinococcus geothermalis (strain DSM 11300) GN=pdxY PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.274e-21
Identity = 74/239 (30.96%), Postives = 124/239 (51.88%), Query Frame = 1
Query:    4 DLIEGLEANNLL-YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHA----AGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEK 702
            DL+ G+ A  +L     +L+GY+GS   ++ +++ V ++R  NP  +Y CDPVMGD G+ ++V  EL  + R + VP A ++TPNQFE E LTG R+    +  +A ++L       GP  VV+TS+  +     +       G+     +  +  +     GTGD + AL LG   + +D    A  L++S+L A+L  T           +  + EI+L+ +QD+   P   F++E+
Sbjct:   70 DLLNGIAARGVLPTCAAVLSGYMGSEGTVSAVVEAVRRVREANPAALYCCDPVMGDVGRGVFVRPELPDLIRTQAVPEADIVTPNQFELELLTGRRVTRLQEALDASRMLRGTLREGGPRLVVVTSLVREDAPQGVIETLAVTGEGAWLCRTPLLPLDPPRNGTGDAIAALFLGHYLRTQD-AGTALSLSMSALFAVLDLT----------HRVGTREIQLVAAQDEYTRPSRVFEAER 297          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_RUBXD (Pyridoxamine kinase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=pdxY PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.708e-21
Identity = 68/219 (31.05%), Postives = 112/219 (51.14%), Query Frame = 1
Query:   52 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSI-----NIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKF 690
            +L+GY+G VS    IL  V ++R  NP  ++ CDPVMGDEG+  +V   +    RE+ VP A ++TPNQFE E L G  + +      A + +   GP  V++TS+       +G + ++ + ++        + +  P +P    G GD   AL LG     R  L+ A  L  SS+ A+L++T+          +  + EI+L+ +Q+ +  P V+F
Sbjct:   83 VLSGYMGDVSLGEVILGAVGRVRGANPQALFCCDPVMGDEGRGFFVRPGIPRFMRERAVPAADVVTPNQFELEYLAGVEVRTLGGALAAAEKVLGLGPGTVLVTSLRRRDAGEEGRIEMLAATRE------GAWLVGTPLLPLEVNGAGDATAALFLGHLLLGR-GLEEALSLTASSVYAVLEKTL----------RRGAREIQLVAAQESLVAPPVRF 284          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: BUD17_YEAST (Putative pyridoxal kinase BUD17 OS=Saccharomyces cerevisiae GN=BUD17 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.840e-20
Identity = 76/238 (31.93%), Postives = 132/238 (55.46%), Query Frame = 1
Query:    4 DLIE-GLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASML-TPNQFEAEQLTGFRIGSEADGREACKILHAAGP--AKVVITSIN----IDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTAL----LLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEI---RLIQSQDDIR 672
            D++E GL  +  + Y  +L+GY+ +V  L  +  +V +L   + N+ ++ DPV+GD G+LYV  E V+VY++ +      L TPNQFE E L G  I +  D ++A K+ H   P  +++V+TS+     +  + +++     +   S E F   IPKI A F+G+GDL++A+    LLG     + +L  +    +  + ++LQ+T  D   A   PQ S+++I   +LIQ +D ++
Sbjct:   68 DIVEKGLIGSLRIKYDAVLSGYLPNVQALQKVAGIVGQLCEGSENVKWILDPVLGDNGRLYVDRECVAVYQDILQNFKIFLATPNQFEMELLVGMSIRTLDDAKQAFKLFHKKYPRVSRIVVTSLELSEFLSNDTYVVAGF--DCSASEEIFFYEIPKINAKFSGSGDLISAMLTDSLLGDRRCTQLSLSASLGQVLWLVTSILQKTY-DLNIAERGPQDSTIDIKDLKLIQCRDILK 302          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: BUD16_YEAST (Putative pyridoxal kinase BUD16 OS=Saccharomyces cerevisiae GN=BUD16 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.133e-20
Identity = 74/237 (31.22%), Postives = 125/237 (52.74%), Query Frame = 1
Query:    4 DLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVV---PVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSIN---IDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDN--LDIAAELAVSSLQALLQRTV---NDYVTA------GFDPQSSSLEIRLIQSQD 663
            +L+ GL  N    Y  LL+GY+ + + +  +     K +  NP +I++ DPVMGDEG+LYV  +++  YR+  +    +  ++TPNQFE E L G  I ++   ++A K LH   P  +++TS +    D   F+      E G++P  ++  +P I +YFTG GDL +ALLL    K   N    +  E  V+++  ++Q+ +     Y +       G   +   +E+RLI+S+D
Sbjct:   63 ELLSGLFDNFSQDYQALLSGYLPNKNSVRCMGTYYAKFKEANPEMIWLMDPVMGDEGQLYVSEDVIPEYRKLALSPKQLVDIITPNQFELEILYGGEIKTKEHLKKALKKLHQTIPV-IIVTSCDCKMFDDKDFIYCVASME-GKTPIVYR--VPFIDSYFTGVGDLFSALLLDRVYKILSNPTTTLKFEDQVNNVLNVIQKVLKITRSYASGKMKAKMGSALEMKEMELRLIESRD 295          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_CORDI (Pyridoxamine kinase OS=Corynebacterium diphtheriae GN=pdxY PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.657e-19
Identity = 72/240 (30.00%), Postives = 115/240 (47.92%), Query Frame = 1
Query:    4 DLIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVS-VYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSIN-----IDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEK 702
            ++I+G+E          +L+GY G     + I+  V +++  NP  +Y CDPVMG+       S+L+  + R+KVVPVA ++TPNQFE E LTG          EA       GP  V++TS+       D    +  + Q         + +  P I     G+GD+  AL  G   + RD  D  A  A SS+  L++ T            + S E+ +I+SQ+ I +P+++F+ E+
Sbjct:   60 NVIDGMEQRGAFERIDAILSGYQGGSDIADVIVDAVARIKEANPQAVYACDPVMGNAKSGCFVSDLIPPLLRDKVVPVADIITPNQFELEYLTGVPAHDTTSTLEAIAAAQEMGPNTVLVTSVRRPETPADAIEMIAANEQ-------GAWLVRTPFIDFKRNGSGDVTAALFTGHYIRERDAADALARTA-SSVFDLIETTFT----------ADSRELLIIESQEAIAHPRLQFEVEQ 281          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_DEIRA (Pyridoxamine kinase OS=Deinococcus radiodurans GN=pdxY PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.250e-18
Identity = 71/240 (29.58%), Postives = 125/240 (52.08%), Query Frame = 1
Query:    4 DLIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREAC----KILHAAGPAKVVITS-INIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEK 702
            +L++G+EA  +L     +L+GY+GS   +  ++  V ++R  +P  +Y CDPVMGD G+ ++V  +L ++   + +P A ++TPNQFE E LTG ++ + AD   A     + L+ AGP  V++TS +  D     I +     G+     +  +  +     GTGD + AL  G   +   + + A  L++S+L ALL  T           +  + EI+L+ +Q +   P+  F +E+
Sbjct:   69 ELLDGIEARGVLPQCDGVLSGYVGSGGTVAAVVGAVGRVRQAHPQALYCCDPVMGDVGRGVFVHPDLPALIAAQAIPAADIVTPNQFELELLTGQKVETLADALAAAHALRERLNPAGPRIVLLTSLVRADAPASSIET-LAVTGEGSWLCRTPLLPLDPPRNGTGDAIAALFYGQFLR-TGSAEQALTLSMSALYALLDLT----------HRLGTREIQLVAAQGEFERPRHLFAAER 296          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_LEIXX (Pyridoxamine kinase OS=Leifsonia xyli subsp. xyli GN=pdxY PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.545e-18
Identity = 65/231 (28.14%), Postives = 114/231 (49.35%), Query Frame = 1
Query:    4 DLIEGLEANNLL-YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKF 690
            ++I G+E   +L     +L+GY GS    + I+  V ++++ +P+ +Y CDPVMG+     +V   +  + R++VVPVA ++TPNQFE   LTG    +      + +   A GP+ V++TS+         G+ +         + +  P++P    G+GD+  AL      +     + A    VSS+  LL  T+          +S   E+RL++SQ+   NP+ +F
Sbjct:   60 EVITGIEERRVLGSIDAVLSGYQGSEGIGDVIVDAVARVKAADPHAVYACDPVMGNAASGCFVAPAIPDLLRDRVVPVADLITPNQFELGYLTGSTPDTLESTLASVEAARAMGPSTVLVTSVERPDR--PEGTIEMLAVDDTGAWIVQTPRLPMKANGSGDVTAALFTAHYVR-TGEAETALRKTVSSVYDLLASTL----------ESGERELRLVESQEFYANPREQF 277          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_PSEPF (Pyridoxamine kinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=pdxY PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.458e-17
Identity = 69/239 (28.87%), Postives = 117/239 (48.95%), Query Frame = 1
Query:    4 DLIEGLEA-NNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG------NLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKS 696
            +L+EG+ A   L     +L+GY+GS +    IL  +E+++++NP  +Y+CDPVMG   K   VP+E+     E+   VA  + PNQ E +  +G +  S  D     + L A GP  V++  ++  G       + L+ +      + P    +  P+ P    G GDL + L L       DNL  A E   +++  +L  T             +S E++L+++QD I +P+VKF++
Sbjct:   64 ELVEGIAAIGELGNCDAVLSGYLGSAAQGRAILSGIERIKAVNPKALYLCDPVMGHPEKGCSVPAEVSDFLLEEAAAVADFMCPNQLELDSFSGRKPQSLFDCLAMARALLARGPKAVLVKHLDYPGKPADGFEMLLVTAEGSWHLRRP---LLAFPRQP---VGVGDLTSGLFLA-RVLLGDNLVAAFEFTAAAVHEVLLET----------QACASYELQLVRAQDRIAHPRVKFEA 285          
The following BLAST results are available for this feature:
BLAST of DY258054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
YQ9A_SCHPO1.153e-2235.71Putative pyridoxal kinase C18.10 OS=Schizosaccharo... [more]
PDXY_GRABC5.721e-2232.00Pyridoxamine kinase OS=Granulibacter bethesdensis ... [more]
PDXY_DEIGD1.274e-2130.96Pyridoxamine kinase OS=Deinococcus geothermalis (s... [more]
PDXY_RUBXD3.708e-2131.05Pyridoxamine kinase OS=Rubrobacter xylanophilus (s... [more]
BUD17_YEAST1.840e-2031.93Putative pyridoxal kinase BUD17 OS=Saccharomyces c... [more]
BUD16_YEAST9.133e-2031.22Putative pyridoxal kinase BUD16 OS=Saccharomyces c... [more]
PDXY_CORDI2.657e-1930.00Pyridoxamine kinase OS=Corynebacterium diphtheriae... [more]
PDXY_DEIRA2.250e-1829.58Pyridoxamine kinase OS=Deinococcus radiodurans GN=... [more]
PDXY_LEIXX6.545e-1828.14Pyridoxamine kinase OS=Leifsonia xyli subsp. xyli ... [more]
PDXY_PSEPF1.458e-1728.87Pyridoxamine kinase OS=Pseudomonas fluorescens (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DC09ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258054 ID=DY258054; Name=DY258054; organism=Citrus clementina; type=EST; length=925bp
TGCGATTTAATAGAAGGACTGGAAGCCAATAATCTATTGTACTATACTCA
TTTATTAACAGGTTATATTGGTTCTGTTTCTTTTCTGAACACGATACTGC
AAGTTGTTGAAAAGCTTCGCTCTATAAACCCAAATCTGATATACGTTTGT
GATCCAGTGATGGGTGACGAGGGAAAGCTCTATGTTCCTTCCGAGCTAGT
ATCAGTATACCGTGAGAAGGTTGTTCCAGTGGCCTCAATGTTGACCCCTA
ATCAGTTTGAAGCAGAACAGTTGACTGGTTTCAGGATTGGGAGTGAAGCA
GATGGGAGGGAAGCTTGTAAGATTCTTCATGCTGCTGGACCTGCAAAGGT
TGTGATCACAAGCATAAATATAGATGGCAATCTTTTCCTGATTGGCAGTC
ATCAGAAGGAAAAGGGTCAGTCTCCGGAGCAGTTCAAGATTGTGATACCC
AAAATTCCTGCATATTTTACAGGAACTGGTGATCTAATGACTGCACTCCT
GCTTGGATGGAGTAATAAATATAGGGACAACCTTGACATTGCTGCTGAGC
TTGCAGTATCAAGTTTGCAGGCTCTTTTACAGAGGACGGTGAATGACTAC
GTTACCGCTGGATTCGATCCCCAATCAAGTAGTTTGGAGATCCGATTGAT
CCAGAGCCAGGATGACATTCGGAACCCACAAGTGAAATTCAAGTCTGAAA
AATACAACTGAATGGATGATATTTATACTTATTGAAACAGAATCAATTTC
TATAGGGTGCATTTGTACTATTTATTTTTGACAGTTTTGGTTTATTTAAC
GCAAAAATGTTACTTTATATGTTCTTTGTCACAATAAAGAGCCGAGAGCA
GCGATGTAACGCTGGTTGCTTGGTACTATGGCGTGGAGGAAAAATCCGAT
GAAATTGGAAATTTTANTTTACCTA
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