DY258054

Overview
NameDY258054
Unique NameDY258054
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length925
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9905 contig Ccv1_Contig9905:4..928. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_PSEF5 (Pyridoxamine kinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=pdxY PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.186e-15
Identity = 64/233 (27.47%), Postives = 108/233 (46.35%), Query Frame = 1
Query:    4 DLIEGLEA-NNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKS 696
            +L+EG+ A   L     +L+GY+GS +    IL  V +++++NP  +Y+CDPVMG   K   VP+E+     ++ V +A  L PNQ E +   G +  S  D     + L   GP  V++  ++  G L                 +  +   P    G GDL + L L       D+L  A E   +++  +L  T             +S E+ L+++QD I +P+V+F++
Sbjct:   64 ELVEGIAAIGELGNCDAVLSGYLGSAAQGRAILSGVARIKAVNPKALYLCDPVMGHPEKGCSVPAEVSDFLLDEAVAMADFLCPNQLELDSFCGRKPQSLFDCLGMARSLLDKGPRAVLVKHLDYPGKLVDGFEMLLVTADGSWHLRRPLLAFPRQPVGVGDLTSGLFLA-RVLLGDSLVAAFEFTAAAVHEVLLET----------QACASYELELVRAQDRIAHPRVRFEA 285          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_PSEP1 (Pyridoxamine kinase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=pdxY PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.773e-15
Identity = 66/246 (26.83%), Postives = 111/246 (45.12%), Query Frame = 1
Query:    7 LIEGLE-ANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIP-------------KIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSE 699
            L+EG+     L +   +L+GY+GS      IL  VE+++++NP  +Y+CDPVMG   K   VP E+     ++    A +L PNQ E +   G R  S  D     + L   GP  V++              H    G++ EQF++++                P    G GDL + L L       D+   A E   +++  +L  T             +S E++L+++QD I +P+V+F+++
Sbjct:   65 LVEGISNIGELGHCDAVLSGYLGSAEQGRAILAGVERIKAVNPKALYLCDPVMGHPEKGCIVPPEVSEFLLDEAAATADILCPNQLELDSFCGRRAQSLEDCVNMARSLLQRGPQVVLV-------------KHLAYPGRAEEQFEMLLVTAEHSWHLRRPLLAFPRQPVGVGDLTSGLFLA-RVLLGDSWVQAFEFTAAAVHEVLLET----------QACASYELQLVRAQDRIAHPRVRFEAQ 286          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_PSE14 (Pyridoxamine kinase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=pdxY PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.155e-14
Identity = 68/236 (28.81%), Postives = 109/236 (46.19%), Query Frame = 1
Query:    7 LIEGLEA-NNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG------NLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKF 690
            LIEG+ A   L     +L+GY+GS +    IL  V ++++ NP  +Y+CDPVMG   K   V  E+     ++   +A  + PNQ E +  +G +  S AD     + L A GP  VV+  ++  G       + L+ +      + P    +  P+ P    G GDL + L L       D+L  A E   +++  +L  T              S E+ L+++QD I +P+VKF
Sbjct:   65 LIEGIAAIGELGNCDAVLSGYLGSAAQGRAILTGVARIKAANPKALYLCDPVMGHPEKGCIVAPEVSDFLLQEAAAMADFMCPNQLELDSFSGRKPESLADCLAMARALLARGPKAVVVKHLDYPGKAADGFEMLLVTAEASWHLRRP---LLAFPRQP---VGVGDLTSGLFLS-RILLGDDLVAAFEFTAAAVHEVLLET----------QACGSYELELVRAQDRIAHPRVKF 283          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_PHOPR (Pyridoxamine kinase OS=Photobacterium profundum GN=pdxY PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.155e-14
Identity = 44/121 (36.36%), Postives = 71/121 (58.68%), Query Frame = 1
Query:    4 DLIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVI 357
            +L++GL+  + L     +LTGY GS      I++ VEK+++ NP+ +Y+CDPVMG  D+G +  P  +     + ++P+A ++ PNQFE  Q     I + +D  EAC I  A GP  V++
Sbjct:   62 ELVQGLDNIDALKRCKAILTGYQGSAEQCEAIIRTVEKVKAQNPSSLYICDPVMGAPDKGCIVAPG-ITEYLVDHLMPMADVIVPNQFELSQFAQMEINTLSDAVEACNIALAKGPKVVLV 181          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_PSEPK (Pyridoxamine kinase OS=Pseudomonas putida (strain KT2440) GN=pdxY PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.509e-14
Identity = 65/239 (27.20%), Postives = 111/239 (46.44%), Query Frame = 1
Query:    7 LIEGLE-ANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG------NLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSE 699
            L+EG+     L +   +L+GY+GS      IL  VE+++++NP  +Y+CDPVMG   K   VP E+     ++    A +L PNQ E +   G R  S  D     + L   GP  V++  +   G       + L+ +      + P    +  P+ P    G GDL + L L       D+   A E   +++  +L  T             +S E++L+++QD I +P+V+F+++
Sbjct:   65 LVEGISNIGELGHCDAVLSGYLGSAEQGRAILAGVERIKAVNPKALYLCDPVMGHPEKGCIVPPEVSEFLLDEAAATADILCPNQLELDSFCGRRAQSLEDCVNMARSLLQRGPQVVLVKHLAYPGRAEEHFEMLLVTAEHSWHLRRP---LLAFPRQP---VGVGDLTSGLFLA-RVLLGDSWVQAFEFTAAAVHEVLLET----------QACASYELQLVRAQDRIAHPRVRFEAQ 286          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_PSEPW (Pyridoxamine kinase OS=Pseudomonas putida (strain W619) GN=pdxY PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.574e-14
Identity = 65/237 (27.43%), Postives = 112/237 (47.26%), Query Frame = 1
Query:    7 LIEGLE-ANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG---NLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEK 702
            L+EG+     L +   +L+GY+GS      IL  VE+++++NP  +Y+CDPVMG   K   VP E+     +  V  A +L PNQ E +   G R  S  D     + L   GP  V++  +   G   ++F +    ++      +  +  P+ P    G GDL + L L       D+   A E   +++  +L  T             +S E++L+++QD I  P+V+F++++
Sbjct:   65 LVEGISNIGELGHCDAVLSGYLGSAEQGRAILAGVERIKAVNPKALYLCDPVMGHAEKGCIVPQEVSEFLLDDAVAQADILCPNQLELDSFCGRRAQSLEDCVRMARGLLERGPQVVLVKHLAYPGRCEDMFEMLLVTRDHSWHLRRPLLAFPRQP---VGVGDLTSGLFLA-RVLLGDSWVQAFEYTAAAVHEVLLET----------QACASYELQLVRAQDRIAYPRVRFEAQR 287          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_BURCA (Pyridoxamine kinase OS=Burkholderia cenocepacia (strain AU 1054) GN=pdxY PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.574e-14
Identity = 62/238 (26.05%), Postives = 111/238 (46.64%), Query Frame = 1
Query:    7 LIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG------NLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRT---VNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKF 690
            L++G+ A  +L     +L+G++GS       +++V  ++++NPN  Y CDP MG  G +     +     E+V  +A  ++PN  E ++L G RI + A+  +AC+ L   GP  +++  ++         N+  +   +   GQ P      +   P +  G GDL +A+             +A  L   S++A  + T   V+  V A +D +   LE  L+ +QD+I  P   F
Sbjct:   62 LVDGIAAIGVLKRCDAVLSGFLGSPPQARAAVEIVRTVKAMNPNAWYFCDPAMGQTGGIRPEPGVEEFIVEEVPALADGMSPNHTELQKLAGRRIETVAEAVDACRALIRRGPQIILVKHLHDRNSPADRFNMLAVTETEAWIGQRP------LYAFPRHPVGVGDLTSAIF------------VACRLRGDSVRAAFEHTLAAVHAVVKATYDARRYELE--LVAAQDEIARPSEWF 279          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_PSEU2 (Pyridoxamine kinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=pdxY PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.362e-14
Identity = 66/238 (27.73%), Postives = 111/238 (46.64%), Query Frame = 1
Query:    7 LIEGLEA-NNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG------NLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKS 696
            LI+G+ A   L     +L+GY+GS +    IL  V ++++ NP  +Y+CDPVMG   K   V  E+     ++   +A  + PNQ E +  +G +  S  D     + L A GP  +V+  ++  G       + L+ +      + P    +  P+ P    G GDL + L L       D+L  A E A +++  +L  T              S E+ L+++QD I +P+VKF++
Sbjct:   65 LIDGIAAIGELGNCDAVLSGYLGSAAQGRAILTGVARIKAANPKALYLCDPVMGHPEKGCIVAPEVSDFLLQEAAAMADFMCPNQLELDSFSGRKPESLHDCLAMARALLARGPRAIVVKHLDYPGKAADGFEMLLVTAEASWHLRRP---LLAFPRQP---VGVGDLTSGLFLS-RVLLGDDLVAAFEFAAAAVHEVLLET----------QACGSYELELVRAQDRIAHPRVKFEA 285          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_PASMU (Pyridoxamine kinase OS=Pasteurella multocida GN=pdxY PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 63/251 (25.10%), Postives = 118/251 (47.01%), Query Frame = 1
Query:    4 DLIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPV----ASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYF-------------TGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEK 702
            +++ G++A   L+    +++GYIGS   +  I+  V  ++S NPN +Y+CDPVMG   K  + +E V   +E ++ +    A ++TPN  E  +L+G  + + A  ++A + + A GP KV++              H  + G+   QF++++      +              G GDL   L +  +N      DI A    ++        VND +T     Q  + E+++I +++ I  P  ++K+ K
Sbjct:   61 EIVRGIDAIEALHLCDAIVSGYIGSAEQVEEIVNAVRFIKSKNPNALYLCDPVMGHPDKGCIVAEGV---KEGLINLAMAEADLITPNLVELRELSGLPVENFAQAQDAVRAILAKGPKKVLV-------------KHLSKVGKDSSQFEMLLATKDGMWHISRPLHQFRKEPVGVGDLTAGLFI--ANLLNGKSDIEAFEHTAN-------AVNDVMTV--TQQKDNYELQIIAAREYIMQPSSQYKAVK 284          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_MANSM (Pyridoxamine kinase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=pdxY PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 67/248 (27.02%), Postives = 117/248 (47.18%), Query Frame = 1
Query:    4 DLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSV-YREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPK--------IPAYF-----TGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEK 702
            ++I G+ E   L     +++GY+GS   ++ I++ VEK++S+NP  +Y+CDPVMG   K  + ++ V        V  A +LTPN  E  +++G  + +     EA K++ A GP  V+I              H  + G+  ++F++++           P Y       G GDL   L L  +NK     D+ A   +++        VN+ +   F  + +S E++LI ++  I NP    K+ K
Sbjct:   61 EIIRGIDEIGELKNCNAVVSGYLGSAEQVDEIIKAVEKVKSLNPQALYLCDPVMGHPDKGCIVADGVKEGLINLAVSHADILTPNLVELREISGLPVENFEQAIEAVKVIRAKGPKTVLI-------------KHLSKVGKYADKFEMLLANDEGIWHLTRPLYTFAKEPVGVGDLTAGLFL--ANKVNGKSDLEAFEHMAN-------AVNEVMKTTF--ELNSYELQLIAARKLIVNPVSSVKAVK 284          
The following BLAST results are available for this feature:
BLAST of DY258054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
PDXY_PSEF55.186e-1527.47Pyridoxamine kinase OS=Pseudomonas fluorescens (st... [more]
PDXY_PSEP16.773e-1526.83Pyridoxamine kinase OS=Pseudomonas putida (strain ... [more]
PDXY_PSE141.155e-1428.81Pyridoxamine kinase OS=Pseudomonas syringae pv. ph... [more]
PDXY_PHOPR1.155e-1436.36Pyridoxamine kinase OS=Photobacterium profundum GN... [more]
PDXY_PSEPK1.509e-1427.20Pyridoxamine kinase OS=Pseudomonas putida (strain ... [more]
PDXY_PSEPW2.574e-1427.43Pyridoxamine kinase OS=Pseudomonas putida (strain ... [more]
PDXY_BURCA2.574e-1426.05Pyridoxamine kinase OS=Burkholderia cenocepacia (s... [more]
PDXY_PSEU23.362e-1427.73Pyridoxamine kinase OS=Pseudomonas syringae pv. sy... [more]
PDXY_PASMU5.734e-1425.10Pyridoxamine kinase OS=Pasteurella multocida GN=pd... [more]
PDXY_MANSM7.489e-1427.02Pyridoxamine kinase OS=Mannheimia succiniciproduce... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DC09ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258054 ID=DY258054; Name=DY258054; organism=Citrus clementina; type=EST; length=925bp
TGCGATTTAATAGAAGGACTGGAAGCCAATAATCTATTGTACTATACTCA
TTTATTAACAGGTTATATTGGTTCTGTTTCTTTTCTGAACACGATACTGC
AAGTTGTTGAAAAGCTTCGCTCTATAAACCCAAATCTGATATACGTTTGT
GATCCAGTGATGGGTGACGAGGGAAAGCTCTATGTTCCTTCCGAGCTAGT
ATCAGTATACCGTGAGAAGGTTGTTCCAGTGGCCTCAATGTTGACCCCTA
ATCAGTTTGAAGCAGAACAGTTGACTGGTTTCAGGATTGGGAGTGAAGCA
GATGGGAGGGAAGCTTGTAAGATTCTTCATGCTGCTGGACCTGCAAAGGT
TGTGATCACAAGCATAAATATAGATGGCAATCTTTTCCTGATTGGCAGTC
ATCAGAAGGAAAAGGGTCAGTCTCCGGAGCAGTTCAAGATTGTGATACCC
AAAATTCCTGCATATTTTACAGGAACTGGTGATCTAATGACTGCACTCCT
GCTTGGATGGAGTAATAAATATAGGGACAACCTTGACATTGCTGCTGAGC
TTGCAGTATCAAGTTTGCAGGCTCTTTTACAGAGGACGGTGAATGACTAC
GTTACCGCTGGATTCGATCCCCAATCAAGTAGTTTGGAGATCCGATTGAT
CCAGAGCCAGGATGACATTCGGAACCCACAAGTGAAATTCAAGTCTGAAA
AATACAACTGAATGGATGATATTTATACTTATTGAAACAGAATCAATTTC
TATAGGGTGCATTTGTACTATTTATTTTTGACAGTTTTGGTTTATTTAAC
GCAAAAATGTTACTTTATATGTTCTTTGTCACAATAAAGAGCCGAGAGCA
GCGATGTAACGCTGGTTGCTTGGTACTATGGCGTGGAGGAAAAATCCGAT
GAAATTGGAAATTTTANTTTACCTA
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