DY258054

Overview
NameDY258054
Unique NameDY258054
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length925
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_BURS3 (Pyridoxamine kinase OS=Burkholderia sp. (strain 383) GN=pdxY PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 61/238 (25.63%), Postives = 110/238 (46.22%), Query Frame = 1
Query:    7 LIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG------NLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRT---VNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKF 690
            L++G+ A   L     +L+G++GS       +++V  ++++NPN  Y CDP MG  G +     +     +++  +A  ++PN  E ++L G RI + A+  EAC+ L   GP  +++  ++         N+  +   +   GQ P      +   P +  G GDL +A+             +A  L   S++A  + T   V+  V A +D +   LE  L+ +QD+I  P   F
Sbjct:   62 LVDGIAAIGALKRCDAVLSGFLGSPPQARAAVEIVRSVKAMNPNAWYFCDPAMGQTGGIRPEPGVEEFMVQEMPALADGMSPNHTELQKLAGRRIETVAEAVEACRALIRRGPQIILVKHLHDRNSPADRFNMLAVTETEAWIGQRP------LYAFPRHPVGVGDLTSAIF------------VACRLRGDSVRAAFEHTLAAVHAVVKATYDARRYELE--LVAAQDEIARPSEWF 279          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_ACTP2 (Pyridoxamine kinase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=pdxY PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 65/250 (26.00%), Postives = 116/250 (46.40%), Query Frame = 1
Query:    4 DLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIP--------KIPAYF-----TGTGDLMTALLLGWSNKYRDNLDIAA-ELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEK 702
            ++I+G+ E   L     +L+GYIGS   +  I+     ++S NPN IY+CDPVMG  D+G++        + ++ +   A ++TPN  E  +L+G R+ +     EA K++   GP KV++              H  + G+  ++F++             P Y       G GDL   L L  +N      DI A E   +++  +++ T N          S   E+++I +++ I  P+ ++K+ K
Sbjct:   61 EIIQGIDEIGELAKCDAVLSGYIGSAEQVTEIVNAFHTVKSRNPNAIYLCDPVMGHPDKGRIVADGVKEGLIKQAMAH-ADIITPNLVELRELSGLRVENFEQAIEAVKVILTKGPKKVLV-------------KHLSKVGKQADKFEMFFATEEGIWHISRPLYQFDKEPVGVGDLTAGLFL--ANLLNGKSDIEAFEHTANAVNDVMEVTAN----------SGVYELQIIAAREFILTPRSQYKAIK 284          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_VIBPA (Pyridoxamine kinase OS=Vibrio parahaemolyticus GN=pdxY PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.717e-13
Identity = 58/167 (34.73%), Postives = 81/167 (48.50%), Query Frame = 1
Query:   52 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSI----NIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTA-----LLLGWSNK 519
            +LTGY GS      +   V K++  NPN +YVCDPVMG  D+G +  P  +      +++P+A ++ PNQFE  Q     I S  D   AC+   A GP  V++  +    N   N+ L         + P QF+    K P    G GDL++A     LL GWS K
Sbjct:   79 VLTGYQGSAEQCLAVEDTVAKVKQANPNALYVCDPVMGAPDKGCIVAPG-IAENLLTRLMPMADVIVPNQFELSQFAEMEIHSLDDAITACQRALAKGPKVVLVKHLYCLENGSFNMLLATQEGIYLAKRP-QFEFA--KQP---VGVGDLISAIFTSGLLKGWSPK 238          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_VIBF1 (Pyridoxamine kinase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=pdxY PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.717e-13
Identity = 67/240 (27.92%), Postives = 108/240 (45.00%), Query Frame = 1
Query:    4 DLIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVI-----TSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEK 702
            +L++GL A         +L+GY+GS +    I+  V K++  NPN IY CDPVMG   K   V  E+ + ++E  +  A ++ PN  E E LTG  I +     EA   L   G   VV+       I  D    L+ +       S   +     + P    G GDL++ ++L         +D A E   +++ +++Q T N            + E++LI SQ+    P++  K+EK
Sbjct:   62 ELVDGLSAIEATQVCDAVLSGYLGSAAQGQEIVTAVNKIKQDNPNAIYFCDPVMGHPEKGCIVAPEVETFFKESALSSADIIAPNLLELESLTGMTINTLDQVIEANNQLLEKGVKMVVVKHLSRAGIQKDRFEMLLTTEDGSYHVSRPLYDFDAKRQP---VGAGDLISGVMLANLMAGYSPID-AFERTNAAVDSVMQETFN----------RGAYELQLIASQERFNAPEIIVKAEK 287          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_BURTA (Pyridoxamine kinase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=pdxY PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.854e-13
Identity = 60/238 (25.21%), Postives = 109/238 (45.80%), Query Frame = 1
Query:    7 LIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG------NLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRT---VNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKF 690
            L++G+ A   L     +L+G++GS +     +++V  +++ NPN  Y CDP MG  G +     +      ++  +A  + PN  E ++L G RI + A+  EAC+ +   GP  +++  ++         N+ ++   +   GQ P      +   P +  G GDL +A+             +A  L   S++A  + T   V+  V A +D +   LE  L+ +QD+I  P   F
Sbjct:   62 LVDGIAAIGALKRCDAVLSGFLGSPAQARAAVEIVRTVKATNPNAWYFCDPAMGQTGGIRPEPGVEEFIVAELPELADGMAPNHGELQKLAGQRIETVAEAVEACRSIIRRGPRLILVKHLHDRNSPADRFNMLVVTETEAWIGQRP------LYAFPRHPVGVGDLTSAIF------------VARRLRGDSVRAAFEHTLAAVHAVVKATYDARRYELE--LVAAQDEIAQPSEWF 279          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_BURP1 (Pyridoxamine kinase OS=Burkholderia pseudomallei (strain 1710b) GN=pdxY PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.340e-13
Identity = 59/238 (24.79%), Postives = 109/238 (45.80%), Query Frame = 1
Query:    7 LIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG------NLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRT---VNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKF 690
            L++G+ A   L     +L+G++GS +     +++V  +++ NPN  Y CDP MG  G +     +      ++  +A  + PN  E ++L G RI + A+   AC+++   GP  +++  ++         N+ ++   +   GQ P      +   P +  G GDL +A+             +A  L   S++A  + T   V+  V A +D +   LE  L+ +QD+I  P   F
Sbjct:   62 LVDGIAAIGALKRCDAVLSGFLGSPAQARAAVEIVRTVKATNPNAWYFCDPAMGQTGGIRPEPGVEEFIVAELPELADGMAPNHSELQKLAGQRIETVAEAVAACRLIIRRGPQVILVKHLHDRNSPADRFNMLVVTETEAWIGQRP------LYAFPRHPVGVGDLTSAIF------------VARRLRGDSVRAAFEHTLAAVHAVVKATYDARRYELE--LVAAQDEIARPSEWF 279          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_HAES2 (Pyridoxamine kinase OS=Haemophilus somnus (strain 2336) GN=pdxY PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.081e-12
Identity = 61/249 (24.50%), Postives = 116/249 (46.59%), Query Frame = 1
Query:    4 DLIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKV-VPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYF-------------TGTGDLMTALLLGWSNKYRDNLDIAA-ELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEK 702
            ++++G++    L+    +L+GYIGS   +  I++   K++  NP  IY+CDPVMG   K  V ++ V     K+ +  A ++TPN  E  +L+G  + +     EA K++ + GP KV++              H    G++  QF++++      +              G GDL   L L  +N      D+ A E   +++  +++ T N          +   E++ I +++ I NP+ ++K+ K
Sbjct:   61 EIVQGIDNIGELHQCDAVLSGYIGSAEQVEEIIKAFHKIKERNPKAIYLCDPVMGHPDKGCVVADGVKEGLIKIAMAQADIITPNLVELRELSGLAVENFEQAIEAVKVILSKGPKKVLV-------------KHLSRVGKNAAQFEMLLANNDGIWHISRPLHNFNKEPVGVGDLTAGLFL--ANLLNGKSDVEAFEHTANTVNDVMETTHN----------AGVYELQTIAAREWIVNPKSQYKAVK 284          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_HAES1 (Pyridoxamine kinase OS=Haemophilus somnus (strain 129Pt) GN=pdxY PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.081e-12
Identity = 61/249 (24.50%), Postives = 116/249 (46.59%), Query Frame = 1
Query:    4 DLIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKV-VPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYF-------------TGTGDLMTALLLGWSNKYRDNLDIAA-ELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEK 702
            ++++G++    L+    +L+GYIGS   +  I++   K++  NP  IY+CDPVMG   K  V ++ V     K+ +  A ++TPN  E  +L+G  + +     EA K++ + GP KV++              H    G++  QF++++      +              G GDL   L L  +N      D+ A E   +++  +++ T N          +   E++ I +++ I NP+ ++K+ K
Sbjct:   61 EIVQGIDNIGELHQCDAVLSGYIGSAEQVEEIIKAFHKIKERNPKAIYLCDPVMGHPDKGCVVADGVKEGLIKIAMAQADIITPNLVELRELSGLAVENFEQAIEAVKVILSKGPKKVLV-------------KHLSRVGKNAAQFEMLLANNDGIWHISRPLHNFNKEPVGVGDLTAGLFL--ANLLNGKSDVEAFEHTANTVNDVMETTHN----------AGVYELQTIAAREWIVNPKSQYKAVK 284          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_BURPS (Pyridoxamine kinase OS=Burkholderia pseudomallei GN=pdxY PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.845e-12
Identity = 59/238 (24.79%), Postives = 108/238 (45.38%), Query Frame = 1
Query:    7 LIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG------NLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQALLQRT---VNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKF 690
            L++G+ A   L     +L+G++GS +     +++V  +++ NPN  Y CDP MG  G +     +      ++  +A  + PN  E ++L G RI + A+   AC+ +   GP  +++  ++         N+ ++   +   GQ P      +   P +  G GDL +A+             +A  L   S++A  + T   V+  V A +D +   LE  L+ +QD+I  P   F
Sbjct:   62 LVDGIAAIGALKRCDAVLSGFLGSPAQARAAVEIVRTVKATNPNAWYFCDPAMGQTGGIRPEPGVEEFIVAELPELADGMAPNHSELQKLAGQRIETVAEAVAACRSIIRRGPQVILVKHLHDRNSPADRFNMLVVTETEAWIGQRP------LYAFPRHPVGVGDLTSAIF------------VARRLRGDSVRAAFEHTLAAVHAVVKATYDARRYELE--LVAAQDEIARPSEWF 279          
BLAST of DY258054 vs. ExPASy Swiss-Prot
Match: PDXY_ACTP7 (Pyridoxamine kinase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=pdxY PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.845e-12
Identity = 64/249 (25.70%), Postives = 114/249 (45.78%), Query Frame = 1
Query:    4 DLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSV-YREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIP--------KIPAYF-----TGTGDLMTALLLGWSNKYRDNLDIAA-ELAVSSLQALLQRTVNDYVTAGFDPQSSSLEIRLIQSQDDIRNPQVKFKSEK 702
            ++I+G+ E   L     +L+GYIGS   +  I+     ++S NPN IY+CDPVMG   K  + ++ V     ++ +  A ++TPN  E  +L+G  + +     EA K++   GP KV++              H  + G+  ++F++             P Y       G GDL   L L  +N      DI A E   +++  +++ T N          S   E+++I +++ I  P+ ++K+ K
Sbjct:   61 EIIQGIDEIGELAKCDAVLSGYIGSAEQVTEIVNAFHTVKSRNPNAIYLCDPVMGHPDKGCIVADGVKEGLIKQAMAHADIITPNLVELRELSGLSVENFEQAIEAVKVILTKGPKKVLV-------------KHLSKVGKQADKFEMFFATEEGIWHISRPLYQFDKEPVGVGDLTAGLFL--ANLLNGKSDIEAFEHTANAVNDVMEVTAN----------SGVYELQIIAAREFILTPRSQYKAIK 284          
The following BLAST results are available for this feature:
BLAST of DY258054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
PDXY_BURS37.489e-1425.63Pyridoxamine kinase OS=Burkholderia sp. (strain 38... [more]
PDXY_ACTP29.781e-1426.00Pyridoxamine kinase OS=Actinobacillus pleuropneumo... [more]
PDXY_VIBPA3.717e-1334.73Pyridoxamine kinase OS=Vibrio parahaemolyticus GN=... [more]
PDXY_VIBF13.717e-1327.92Pyridoxamine kinase OS=Vibrio fischeri (strain ATC... [more]
PDXY_BURTA4.854e-1325.21Pyridoxamine kinase OS=Burkholderia thailandensis ... [more]
PDXY_BURP16.340e-1324.79Pyridoxamine kinase OS=Burkholderia pseudomallei (... [more]
PDXY_HAES21.081e-1224.50Pyridoxamine kinase OS=Haemophilus somnus (strain ... [more]
PDXY_HAES11.081e-1224.50Pyridoxamine kinase OS=Haemophilus somnus (strain ... [more]
PDXY_BURPS1.845e-1224.79Pyridoxamine kinase OS=Burkholderia pseudomallei G... [more]
PDXY_ACTP71.845e-1225.70Pyridoxamine kinase OS=Actinobacillus pleuropneumo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DC09ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258054 ID=DY258054; Name=DY258054; organism=Citrus clementina; type=EST; length=925bp
TGCGATTTAATAGAAGGACTGGAAGCCAATAATCTATTGTACTATACTCA
TTTATTAACAGGTTATATTGGTTCTGTTTCTTTTCTGAACACGATACTGC
AAGTTGTTGAAAAGCTTCGCTCTATAAACCCAAATCTGATATACGTTTGT
GATCCAGTGATGGGTGACGAGGGAAAGCTCTATGTTCCTTCCGAGCTAGT
ATCAGTATACCGTGAGAAGGTTGTTCCAGTGGCCTCAATGTTGACCCCTA
ATCAGTTTGAAGCAGAACAGTTGACTGGTTTCAGGATTGGGAGTGAAGCA
GATGGGAGGGAAGCTTGTAAGATTCTTCATGCTGCTGGACCTGCAAAGGT
TGTGATCACAAGCATAAATATAGATGGCAATCTTTTCCTGATTGGCAGTC
ATCAGAAGGAAAAGGGTCAGTCTCCGGAGCAGTTCAAGATTGTGATACCC
AAAATTCCTGCATATTTTACAGGAACTGGTGATCTAATGACTGCACTCCT
GCTTGGATGGAGTAATAAATATAGGGACAACCTTGACATTGCTGCTGAGC
TTGCAGTATCAAGTTTGCAGGCTCTTTTACAGAGGACGGTGAATGACTAC
GTTACCGCTGGATTCGATCCCCAATCAAGTAGTTTGGAGATCCGATTGAT
CCAGAGCCAGGATGACATTCGGAACCCACAAGTGAAATTCAAGTCTGAAA
AATACAACTGAATGGATGATATTTATACTTATTGAAACAGAATCAATTTC
TATAGGGTGCATTTGTACTATTTATTTTTGACAGTTTTGGTTTATTTAAC
GCAAAAATGTTACTTTATATGTTCTTTGTCACAATAAAGAGCCGAGAGCA
GCGATGTAACGCTGGTTGCTTGGTACTATGGCGTGGAGGAAAAATCCGAT
GAAATTGGAAATTTTANTTTACCTA
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