DY258057
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS1_CHICK (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Gallus gallus GN=HMGCS1 PE=1 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 2.462e-93 Identity = 183/346 (52.89%), Postives = 236/346 (68.21%), Query Frame = 2 Query: 2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLSG------DESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGSLIHNKHSE-LDGQRVVFVSYGSGLTATMFSLKLSEGHHPLSLSNILT 1003 ED+ S+ LT V L+E+ + IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTD+EG+D+TNACYGGTAALFN +NW+ESSSWDGRY LVV D AVYA G ARPTGGA AV MLVG +AP+ FE LRG+HM HAYDFYKP++ SEYPVVDGKLS CYL ALD CY +K + EG + F+L++ + +FHSPY KLVQKS AR L NDF+ D+ A+ G FS L +++Y RD+EK + + L++ K + S L+ Q GNMYT S+Y L SL+ E L GQR+ SYGSG AT++S+++++ P S + +T Sbjct: 63 EDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYATGNARPTGGAGAVAMLVGSNAPLIFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCYSVYRNKIHAQWQKEGTDRGFTLNDFGFMIFHSPYCKLVQKSVARLLLNDFLS-----DQNAETANGVFSGLEAFRDVKLEDTYFDRDVEKAFMKASAELFNQKTKASLLVSNQNGNMYTPSVYGCLASLLAQYSPEHLAGQRISEFSYGSGFAATLYSIRVTQDATPGSALDKIT 403
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS1_CRIGR (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Cricetulus griseus GN=HMGCS1 PE=3 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 9.357e-93 Identity = 175/341 (51.32%), Postives = 238/341 (69.79%), Query Frame = 2 Query: 2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEG--KQFSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGS-LIHNKHSELDGQRVVFVSYGSGLTATMFSLKLSEGHHPLSLSNILT 1003 ED+ S+ LT V NL+E+ + IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGTAA+FN VNW+ESSSWDGRY LVV D A+YA G ARPTGG AV +L+GP+AP+ F+ LRG+HM HAYDFYKP++ SEYP+VDGKLS CYL ALD CY K + ++++K EG F+L++ + + HSPY KLVQKS AR NDF+ + + + L F + +++Y RD+EK + + L++ K + S L+ Q GNMYT+S+Y +L S L +L G+R+ SYGSGL AT++SLK+++ P S + +T Sbjct: 63 EDINSLCLTVVQNLMERNSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAIYATGNARPTGGVGAVALLIGPNAPLIFDRGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYRKKIRAQWQK-EGNDNDFTLNDFGFMISHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKVT 402
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS2_BOVIN (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Bos taurus GN=HMGCS2 PE=2 SV=1) HSP 1 Score: 339.347 bits (869), Expect = 2.722e-92 Identity = 178/369 (48.24%), Postives = 240/369 (65.04%), Query Frame = 2 Query: 2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ------FSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGSLI-HNKHSELDGQRVVFVSYGSGLTATMFSLKLSEGHHPLS-LSNILTGYEWWQGSENQGRDFPPENLVEIMKPK 1084 EDV S+ LT V L+E+ ++ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TNACYGGTA+LFN NW+ESSSWDGRY LVVC D AVY G ARPTGGA AV MLVGP+AP+ E LRG+HM + YDFYKP++ SEYP+VDGKLS CYL ALD CY K EK + KQ F+L + Y +FH+P+ KLVQKS AR +FNDF+ + + L F L +++Y ++D++K + + +++ K + S + GNMYT+SLY L SL+ H+ +L G R+ SYGSGL A+ FS ++S+ P S L +++ Q + PE EIM + Sbjct: 100 EDVNSLCLTVVQQLMERTQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYALVVCGDIAVYPSGNARPTGGAGAVAMLVGPEAPLVLERGLRGTHMENVYDFYKPDVTSEYPLVDGKLSIQCYLRALDKCYAFYRQKIEK-QWKQAGIDRPFTLDDVQYMIFHTPFCKLVQKSLARLMFNDFLLASGDTQTGIYKGLEAFRGLKLEDTYTNKDVDKAFLKASLNMFNKKTKNSLYLSTYNGNMYTSSLYGCLASLLAHHSAQDLAGSRIGAFSYGSGLAASFFSFRVSQDASPGSPLEKLVSSTSDLQKRLASRKRVSPEEFTEIMNQR 467
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCSB_DICDI (Hydroxymethylglutaryl-CoA synthase B OS=Dictyostelium discoideum GN=hgsB PE=3 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 4.644e-92 Identity = 165/323 (51.08%), Postives = 237/323 (73.37%), Query Frame = 2 Query: 2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL-EGKQFSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLS-GDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGSLIHNKHSELDGQRVVFVSYGSGLTATMFSLKLS 964 ED++SM++T+V ++ KY ID + IGRLEVG+ET+IDKSKS+K+ +M +F+++GNT +EGVD+ NACYGGT ALFN + W+ESS WDGRY LVV D AVY++G ARPTGGA V ML+GP+A + F+ LRG+HM + DFYKP+L+SEYP VDGKLS CYL ALD CY K+E + + +FS+ + DY FHSPYN+LVQKS+AR ++NDF++N ++ + L PF LS G +SY + L++++ +L+ + KV PSTL+ K+ GN Y S+Y+ + SL+ N ++L+ ++V+ SYGSGL A++FS +++ Sbjct: 53 EDIVSMAMTSVKMMMSKYSIDYQSIGRLEVGTETIIDKSKSVKSSIMSLFQEYGNTSLEGVDTLNACYGGTNALFNSLQWIESSYWDGRYALVVTGDIAVYSKGAARPTGGAGVVTMLIGPNATLIFDQSLRGTHMENVNDFYKPDLSSEYPYVDGKLSIECYLRALDKCYLEYKKKFESINDDNKFSMDSFDYVCFHSPYNRLVQKSYARLIYNDFLQNPNN---PKYQDLLPFKDLSTGKDSYINSKLDQITLKLSLDDFKTKVNPSTLLSKECGNSYCGSVYSGILSLLSNV-NDLNNKKVLVFSYGSGLAASLFSFRIN 371
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS2_PIG (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Sus scrofa GN=HMGCS2 PE=2 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 7.921e-92 Identity = 178/369 (48.24%), Postives = 240/369 (65.04%), Query Frame = 2 Query: 2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ------FSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGSLIHN-KHSELDGQRVVFVSYGSGLTATMFSLKLSEGHHPLS-LSNILTGYEWWQGSENQGRDFPPENLVEIMKPK 1084 ED+ S+ LT V L+E+ ++ +G LEVG+ET+IDKSKS+KT LM++F+ GNTDIEG+D+TNACYGGTA+LFN NWVESS+WDGRY +VVC D AVY G +RPTGGA AV MLVGP+AP+A E LRG+HM +AYDFYKPN SEYP+VDGKLS CYL ALD CY K EK + KQ F+L + + +FH+P+ KLVQKS AR +F+DF+ S + + L F +++Y ++D+EK Q+ + L++ K +PS + GNMYT+SLY L SL+ +L G R+ SYGSGL A+ +SL++S+ P S L +++ + PE EIM + Sbjct: 100 EDINSLCLTVVQRLMERTQLPWDSVGWLEVGTETIIDKSKSVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWVESSAWDGRYAVVVCGDIAVYPRGNSRPTGGAGAVAMLVGPEAPLALERGLRGTHMENAYDFYKPNATSEYPLVDGKLSIQCYLRALDRCYTLYRQKIEK-QWKQAGIERHFTLDDLQFMIFHTPFCKLVQKSLARLMFSDFLLADSDTQSSLYKGLEAFRGQKLEDTYANKDIEKAFQKASLDLFNKKTKPSLYLSLHNGNMYTSSLYGCLASLLSQCSAQDLAGSRIGAFSYGSGLAASFYSLRVSQDASPGSPLEKLVSSVSDLPERLASRKRVSPEEFTEIMNQR 467
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS2_BLAGE (Hydroxymethylglutaryl-CoA synthase 2 OS=Blattella germanica GN=HMGCS-2 PE=2 SV=1) HSP 1 Score: 334.339 bits (856), Expect = 8.758e-91 Identity = 182/368 (49.46%), Postives = 237/368 (64.40%), Query Frame = 2 Query: 2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL------EGKQFSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGSLIHNKH-SELDGQRVVFVSYGSGLTATMFSLKLSEGHHPLS-LSNILTGYEWWQGSENQGRDFPP---ENLVEI 1072 ED+ S+ LTAV L+E+ ID IG LEVG+ET++DK KS+KT LMQ+FE+ GNTD+EG+D+ NACY GTAALFN + W+ESSSWDGRY +VV D A+YA+ PTGGA A++ML+G +AP+ + +R SHM HAYDFYKP+L SEYPVVDGKLS CYL ALD CY CSK EK E + L D F+FHSPY KLVQKS AR + NDF++ + L L +++Y RD+EK+ +K L++ K +PS ++ QVGNMYT SLY L SL+ ++ EL G+ + SYGSG A+MFSL +S P S LS ++T + Q P EN++EI Sbjct: 54 EDINSLCLTAVDKLMERNNIDYNDIGWLEVGTETILDKVKSVKTVLMQLFEESGNTDVEGIDTINACYRGTAALFNALIWIESSSWDGRYAIVVAADIAIYAK-ECSPTGGAGALLMLIGANAPIVIDRGVRASHMKHAYDFYKPDLMSEYPVVDGKLSVQCYLSALDHCYPRFCSKTEKYLKRCGKENTKIDLDYFDAFVFHSPYCKLVQKSVARLVLNDFIQYPEKYQD-----LQQLRNLKFEDTYFDRDIEKIFMDKSKQLFEKKTKPSLMLANQVGNMYTTSLYGGLVSLLISEDIGELAGKCICMFSYGSGFAASMFSLHISTDSSPGSTLSRLVTNLTHIKPQVQQRVKLSPGEFENIMEI 415
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS_YEAST (Hydroxymethylglutaryl-CoA synthase OS=Saccharomyces cerevisiae GN=ERG13 PE=1 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 1.354e-83 Identity = 165/329 (50.15%), Postives = 215/329 (65.35%), Query Frame = 2 Query: 2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK------YEKLEGKQF--SLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGSLIHNKHS-ELDGQRVVFVSYGSGLTATMFSLKL 961 ED+ SMSLT ++ L++ Y ID +IGRLEVG+ET+IDKSKS+K+ LMQ+F + NTD+EG+D+ NACYGGT ALFN +NW+ES++WDGR +VVC D A+Y +G ARPTGGA V M +GPDAP+ F+S +R S+M HAYDFYKP+ SEYP VDG S TCY+ ALD YK K G L DY +FH P KLV KS+ R L+NDF N E E +T DES +++EK +AKP + +V S ++P GNMYTAS+YAA SL++ S +L G+RV SYGSGL A+++S K+ Sbjct: 95 EDIYSMSLTVLSKLIKSYNIDTNKIGRLEVGTETLIDKSKSVKSVLMQLFGE--NTDVEGIDTLNACYGGTNALFNSLNWIESNAWDGRDAIVVCGDIAIYDKGAARPTGGAGTVAMWIGPDAPIVFDS-VRASYMEHAYDFYKPDFTSEYPYVDGHFSLTCYVKALDQVYKSYSKKAISKGLVSDPAGSDALNVLKYFDYNVFHVPTCKLVTKSYGRLLYNDFRANPQLFPEVDAE----LATRDYDESLTDKNIEKTFVNVAKPFHKERVAQSLIVPTNTGNMYTASVYAAFASLLNYVGSDDLQGKRVGLFSYGSGLAASLYSCKI 416
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS_SCHPO (Hydroxymethylglutaryl-CoA synthase OS=Schizosaccharomyces pombe GN=hcs1 PE=1 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 4.508e-79 Identity = 158/321 (49.22%), Postives = 210/321 (65.42%), Query Frame = 2 Query: 2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ--FSLSNADYFMFHSPYNKLVQKSFARSLFNDFMRNASSVD-EAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGSLIHN-KHSELDGQRVVFVSYGSGLTATMFS 952 ED+ S LTA++ L+++Y+ID +IGRLEVG+ET+IDKSKS+K+ LMQ+F N ++EG+D NACYGG ALFN ++W+ESS+WDGR G+VV D A+YA+G ARPTGGA V +LVGP+AP+ FE LRG++M HAYDFYKP+L SEYP VDG S CY+ ALD Y + GK L DY +FH+P K VQK++AR L+ D S+ + E +E L STL +S + LEK + K ++ +V PS P GNMYTAS+++ L +L+ EL G+RV SYGSGL A+ FS Sbjct: 54 EDIYSFGLTALSQLIKRYQIDISKIGRLEVGTETIIDKSKSVKSVLMQLFGD--NHNVEGIDCVNACYGGVNALFNTIDWIESSAWDGRDGIVVAGDIALYAKGNARPTGGAGCVALLVGPNAPIVFEPGLRGTYMQHAYDFYKPDLTSEYPYVDGHFSLECYVKALDGAYANYNVRDVAKNGKSQGLGLDRFDYCIFHAPTCKQVQKAYARLLYTDSAAEPSNPELEGVRELL---STLDAKKSLTDKALEKGLMAITKERFNKRVSPSVYAPTNCGNMYTASIFSCLTALLSRVPADELKGKRVGAYSYGSGLAASFFS 369
BLAST of DY258057 vs. ExPASy Swiss-Prot
Match: HMCS_CAEEL (Hydroxymethylglutaryl-CoA synthase OS=Caenorhabditis elegans GN=F25B4.6 PE=2 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 7.248e-53 Identity = 123/320 (38.44%), Postives = 181/320 (56.56%), Query Frame = 2 Query: 2 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVE-SSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKP--NLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFMFHSPYNKLVQKSFARSLFNDF-MRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALGSLIHNKHSELDGQRVVFVSYGSGLTATMF 949 ED++S+SLT L+E YKI IG L VG+ET+IDKSKS+KT LM +F GN+DIEGVD NAC+GG AL + ++WV + D + +VV D A+Y EGPAR TGGA A+ L+ PDA + + + HM + +DF+KP + SEYPVVDG LS + YL A+ Y SK + L++ D HSP+ K+VQK A + D +R+ KL DE+ ++ + + +L+ ++ K P + +++GNMYT SL+A L + + + ++F +YGSGL + +F Sbjct: 60 EDIVSISLTVTRKLIETYKISTDSIGCLVVGTETMIDKSKSVKTALMDLFP--GNSDIEGVDIKNACFGGAQALLHAIDWVTVNHPLDKKNAIVVVADIAIYEEGPARCTGGAGAIAFLICPDASIPIDRQFSACHMKNTWDFFKPITPIPSEYPVVDGSLSLSSYLEAVRMTYTYFISKVNRHTTGIDGLNSFDGVFLHSPFTKMVQKGLAVMNYTDSQLRHKQLNGNGVDHKL--------DENDRAGLAKMI--ELSAQVWKEKTDPYLVFNRRIGNMYTPSLFAQLLAYLAADDCVTGEKSILFFAYGSGLASAIF 367 The following BLAST results are available for this feature:
BLAST of DY258057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258057 ID=DY258057; Name=DY258057; organism=Citrus clementina; type=EST; length=1233bpback to top |