DY258060

Overview
NameDY258060
Unique NameDY258060
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_CARHZ (S-adenosylmethionine synthetase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=metK PE=3 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 6.120e-67
Identity = 135/238 (56.72%), Postives = 163/238 (68.49%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFT-KRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+ DQISDAVLDA L QDP+++VACET   T +V+V GEITT   VD  K+VR+T R IG+     G D D C V+ +I++QSPDIA GV+       G  T    E IGAGDQG MFGYAT+ET E MP+   LA +L  RL EVRK+    +LRPDGKTQVTVEY  D     PVRV T+++STQH   V+ +EI  D+ EHV+KPVIPE  LDE T + +NP
Sbjct:    5 LFTSESVTEGHPDKIADQISDAVLDAILAQDPQARVACETAVTTGLVLVIGEITTSCYVDIPKVVRETIREIGYTRAKYGFDGDTCAVITSIDEQSPDIALGVNRALEAKTGEMTDDEIEAIGAGDQGMMFGYATNETPELMPMPISLAHRLARRLAEVRKSRLLPYLRPDGKTQVTVEYDGDK----PVRVDTIVVSTQHHPDVSQEEIRKDIIEHVVKPVIPEHLLDENTRYFVNP 238          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_BRAHW (S-adenosylmethionine synthetase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=metK PE=3 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 6.120e-67
Identity = 129/240 (53.75%), Postives = 168/240 (70.00%), Query Frame = 1
Query:   97 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDI--GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            +++ + F+SESV EGHPDK+CD +SDAVLD CL+QDP S+VACET  KT M+M+ GEITTKAK+DY+KI RDT R IG+ S D+G DAD C V+ +I +QSPDI  GV    G F     ++  GAGDQG MFGYA +ET  FMPL+  LA +L  RLT+VRK+    +LRPDGK+QVTVEY +   A    R+  V+ISTQH   V + +I AD+K++VI  + P   LD  T +++NP
Sbjct:    3 EIKNYYFSSESVTEGHPDKICDAVSDAVLDECLKQDPNSRVACETLAKTGMIMIAGEITTKAKLDYQKIARDTVRRIGYTSSDMGFDADTCAVMESIAEQSPDIDMGVSAGKGLFNSESSNVSEGAGDQGIMFGYAINETETFMPLTIHLAHRLAERLTKVRKDKVVDYLRPDGKSQVTVEYKDGKAA----RIEAVVISTQHAAGVDHKQIEADIKKYVINEICPANMLDSNTKYYINP 238          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_GEOKA (S-adenosylmethionine synthetase OS=Geobacillus kaustophilus GN=metK PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 7.992e-67
Identity = 133/238 (55.88%), Postives = 165/238 (69.33%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFT-KRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP ++VACET   T +V+V GEITT   VD  +IVRDT R IG+     G DAD C VL +I++QSPDIA GV        G  T +  E IGAGDQG MFG+A +ET E MP+   LA +L  RL EVRK     +LRPDGKTQVT+E Y++NG   PVRV T+++S QH   +T ++I  D+KE VIKPV+P + LDE T + +NP
Sbjct:    7 LFTSESVTEGHPDKICDQISDAILDAILEKDPNARVACETSVTTGLVLVSGEITTSTYVDIPRIVRDTVREIGYTRAKYGFDADTCAVLTSIDEQSPDIAMGVDRALEAREGQMTDEEIEAIGAGDQGLMFGFACNETEELMPMPISLAHRLARRLAEVRKTDVLPYLRPDGKTQVTIE-YDENGK--PVRVDTIVVSAQHHPEITQEQIQRDIKEQVIKPVVPAELLDENTKYFINP 241          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_ANATD (S-adenosylmethionine synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=metK PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 7.992e-67
Identity = 138/238 (57.98%), Postives = 161/238 (67.65%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFTK-RPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+CDQISDAVLDA LE+DP ++VACE    T +V+V GEITTK  VD  KI RDT R IG+     G DAD C V+ +I++QSPDIA GV        G  T+   E IGAGDQG MFG+A DET   MP+   LA KL  RL  VRK     +LRPDGKTQVTVEY +D     PVRV TV++STQH   VT+ +I AD+ EHVIKPVIPE  LD+ T   +NP
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILEKDPYARVACEVAVTTGLVLVMGEITTKCYVDIPKIARDTIREIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVDKALEAKLGEMTEDEIEAIGAGDQGMMFGFACDETPVLMPMPIYLAHKLARRLAYVRKEGILPYLRPDGKTQVTVEYEDDK----PVRVDTVVVSTQHSPEVTHAQIEADVIEHVIKPVIPEGMLDKNTKIFINP 237          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_CLOTH (S-adenosylmethionine synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=metK PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.044e-66
Identity = 138/238 (57.98%), Postives = 160/238 (67.23%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+CDQISDAVLDA   QDP ++VACET   T +V+V GEITT   VD  KIVR T R IG+     G D D C VL +I++QSPDIA GV+     +         E IGAGDQG MFG+A DET E MP+   LA KL  RL++VRKN T ++LRPDGK+QVTVEY  D     PVRV TVLISTQH   V  D I  D+ EHVIKPVIP + LD KT + +NP
Sbjct:    5 LFTSESVTEGHPDKICDQISDAVLDAIFSQDPMARVACETAVTTGLVLVTGEITTNCYVDIPKIVRSTIREIGYDRAKYGFDCDTCAVLTSIDEQSPDIAMGVNKALEAKTGEMSDEEIEAIGAGDQGMMFGFACDETPELMPMPISLAHKLAMRLSQVRKNGTLNYLRPDGKSQVTVEYDGDK----PVRVDTVLISTQHGPEVDYDTIKRDVIEHVIKPVIPAELLDSKTKYLVNP 238          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_LACRJ (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain JCM 1112) GN=metK PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.363e-66
Identity = 129/239 (53.97%), Postives = 173/239 (72.38%), Query Frame = 1
Query:  103 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            E  LFTSESV+EGHPDK+ DQISDA+LD  L++DP+S+VA ET   T +V+VFGE++TKA V+ ++IVRDT R IG+     G DAD+C V+  I++QSPDIAQGV      R       + IGAGDQG MFGYATDET E+MPL+ VL+ KL  ++ ++RK+   S+LRPD K +VTVEY  ++    P+RV TV++STQHD  V+ D+I  D+KE VI+ VIP +YLD++T + +NP
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDELLKKDPDSRVAVETSVTTGLVLVFGEVSTKAYVNIQQIVRDTIRKIGYTDGKYGFDADNCAVITAIDEQSPDIAQGVDDSLETREGEADPLDKIGAGDQGLMFGYATDETPEYMPLTLVLSHKLMRKIAQLRKDGVISYLRPDAKAEVTVEYDEND---KPLRVDTVVLSTQHDPEVSLDQIKKDIKEQVIEAVIPAEYLDDQTKYFINP 238          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_LACRD (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain DSM 20016) GN=metK PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.363e-66
Identity = 129/239 (53.97%), Postives = 173/239 (72.38%), Query Frame = 1
Query:  103 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            E  LFTSESV+EGHPDK+ DQISDA+LD  L++DP+S+VA ET   T +V+VFGE++TKA V+ ++IVRDT R IG+     G DAD+C V+  I++QSPDIAQGV      R       + IGAGDQG MFGYATDET E+MPL+ VL+ KL  ++ ++RK+   S+LRPD K +VTVEY  ++    P+RV TV++STQHD  V+ D+I  D+KE VI+ VIP +YLD++T + +NP
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDELLKKDPDSRVAVETSVTTGLVLVFGEVSTKAYVNIQQIVRDTIRKIGYTDGKYGFDADNCAVITAIDEQSPDIAQGVDDSLETREGEADPLDKIGAGDQGLMFGYATDETPEYMPLTLVLSHKLMRKIAQLRKDGVISYLRPDAKAEVTVEYDEND---KPLRVDTVVLSTQHDPEVSLDQIKKDIKEQVIEAVIPAEYLDDQTKYFINP 238          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.363e-66
Identity = 135/238 (56.72%), Postives = 161/238 (67.65%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFT-KRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+CDQISDAVLDA LE+DP ++VACE    T +V+V GEITTK  VD  KI RDT R IG+     G DAD C V+ +I++QSPDIA GV        G  T    E IGAGDQG MFG+A DET   MP+   LA KL  RL  VRK     +LRPDGKTQVTVEY +D     P+RV T+++STQH   VT+ +I AD+ EHVIKP+IPE  LD+ T  ++NP
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILEKDPYARVACEVAVTTGLVLVMGEITTKCYVDIPKIARDTIREIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVDKALEAKLGEMTDDEIEAIGAGDQGMMFGFACDETPVLMPMPIYLAHKLARRLAYVRKGGILPYLRPDGKTQVTVEYEDDR----PIRVDTIVVSTQHSPEVTHAQIEADVIEHVIKPIIPEGMLDKNTKIYINP 237          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_BACHK (S-adenosylmethionine synthetase OS=Bacillus thuringiensis subsp. konkukian GN=metK PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.037e-66
Identity = 137/238 (57.56%), Postives = 165/238 (69.33%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+CDQISD++LDA L +D  ++VACET   T +V+V GEITT   VD  KIVR+T + IG+     G DA+ C VL +I++QS DIA GV      R         E IGAGDQG MFG+A +ET E MPL   LA KL  RLTEVRKN T S+LRPDGKTQVTVE Y++NG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKFFINP 241          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_BACCZ (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ZK / E33L) GN=metK PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.037e-66
Identity = 137/238 (57.56%), Postives = 165/238 (69.33%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+CDQISD++LDA L +D  ++VACET   T +V+V GEITT   VD  KIVR+T + IG+     G DA+ C VL +I++QS DIA GV      R         E IGAGDQG MFG+A +ET E MPL   LA KL  RLTEVRKN T S+LRPDGKTQVTVE Y++NG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKFFINP 241          
The following BLAST results are available for this feature:
BLAST of DY258060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CARHZ6.120e-6756.72S-adenosylmethionine synthetase OS=Carboxydothermu... [more]
METK_BRAHW6.120e-6753.75S-adenosylmethionine synthetase OS=Brachyspira hyo... [more]
METK_GEOKA7.992e-6755.88S-adenosylmethionine synthetase OS=Geobacillus kau... [more]
METK_ANATD7.992e-6757.98S-adenosylmethionine synthetase OS=Anaerocellum th... [more]
METK_CLOTH1.044e-6657.98S-adenosylmethionine synthetase OS=Clostridium the... [more]
METK_LACRJ1.363e-6653.97S-adenosylmethionine synthetase OS=Lactobacillus r... [more]
METK_LACRD1.363e-6653.97S-adenosylmethionine synthetase OS=Lactobacillus r... [more]
METK_CALS81.363e-6656.72S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK_BACHK3.037e-6657.56S-adenosylmethionine synthetase OS=Bacillus thurin... [more]
METK_BACCZ3.037e-6657.56S-adenosylmethionine synthetase OS=Bacillus cereus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DD07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258060 ID=DY258060; Name=DY258060; organism=Citrus clementina; type=EST; length=803bp
GGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGT
CTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGA
TGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGAC
AAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCA
GGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGG
TCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAG
ATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGG
TCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCC
CGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGAC
ATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGAC
CTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTC
GTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGAT
GGGAAGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCATGGT
CCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTG
TCACAAATGATGAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCT
GTCATCCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCC
ATC
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