DY258060

Overview
NameDY258060
Unique NameDY258060
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_CLOPH (S-adenosylmethionine synthetase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=metK PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 6.766e-66
Identity = 133/238 (55.88%), Postives = 169/238 (71.01%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+CDQISDAVLDA LEQDP S+VACET   T +V+V GEITT   VD +KIVRDT + IG+     G DAD C V+V +++QS DIA GV      +         E IGAGDQG MFGYA++ET E MP    LA KL  +L++VRK+ T S+LRPDGK+QVTVE YN+ G   PV ++ V++STQHD  VT ++I  D+K++V +PV+P++ +DEKT F +NP
Sbjct:    6 LFTSESVTEGHPDKICDQISDAVLDALLEQDPMSRVACETAITTGLVLVMGEITTSGYVDIQKIVRDTVKEIGYDRAKYGFDADTCGVIVALDEQSKDIALGVDKALEAKQNEMTDEAIEAIGAGDQGMMFGYASNETEELMPYPISLAHKLTKQLSKVRKDGTLSYLRPDGKSQVTVE-YNEEGK--PVHLNAVVLSTQHDPDVTQEQIHEDIKKYVFEPVLPKEMVDEKTKFFINP 240          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 6.766e-66
Identity = 134/238 (56.30%), Postives = 164/238 (68.91%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFT-KRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+CDQISDAVLDA  E+DP+++VACET   T MVMV GEITT   VD  K+VR+T R IG+     G D D C V+ +I++QS DIA GV        G  + ++ + IGAGDQG MFG+A DET E MP+  +LA KL  +L+EVRKN    +LRPDGK+QVTVEY  D     PVRV TV+ISTQH   V++D I  D+ EHVI PVIP + LDE T + +NP
Sbjct:    5 LFTSESVTEGHPDKICDQISDAVLDAIYEKDPQARVACETAVTTGMVMVMGEITTNCYVDIPKVVRNTIREIGYDRAKYGFDCDTCAVMTSIDEQSSDIAMGVDKALEAKVGEMSEEQVQAIGAGDQGMMFGFACDETPELMPMPIILAHKLTMKLSEVRKNGKVKYLRPDGKSQVTVEYDGDK----PVRVDTVVISTQHGADVSHDTIEKDIMEHVIIPVIPRELLDEGTKYFINP 238          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_CLOBL (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=metK PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 6.766e-66
Identity = 129/236 (54.66%), Postives = 162/236 (68.64%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTK------RPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+CDQISDAVLDA L++DP  +VACET   T MVMV GEI+TK  VD  K+VR+T R IG+     G D + C V+ +I++QS DIA GV            R + +GAGDQG MFG+AT+ET E+MP+   +A KL  RL+EVRKN T  +LRPDGKTQVTVEY N      PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P + LDE T + +NP
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAMGVDEALESKKGEMDRLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYENGK----PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENTKYFINP 235          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_THEP3 (S-adenosylmethionine synthetase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=metK PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 8.837e-66
Identity = 131/238 (55.04%), Postives = 162/238 (68.07%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFT-KRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+CDQISDA+LD  L++DP ++VACET   T +V+V GEITT+  VD  K+VR     IG+     G DAD C V+ +I++QSPDIA GV        G  +    E IGAGDQG MFG+A DET E MP+  +LA KL  RL EVRKN T S+LRPDGKTQVTVEY +D     PVRV +V++S QH   + +D I  D+ EHVIKP+IPE  +D+KT   +NP
Sbjct:    4 LFTSESVTEGHPDKICDQISDAILDEILKKDPYARVACETAVTTGLVLVMGEITTQCYVDIPKVVRKVVEEIGYTRAKFGFDADTCAVITSIDEQSPDIALGVDKALEAKRGELSDSEIEAIGAGDQGLMFGFACDETEELMPMPIMLAHKLARRLAEVRKNGTLSYLRPDGKTQVTVEYEDDK----PVRVDSVVVSAQHAPEIDHDTIERDIIEHVIKPIIPENMIDDKTKIFVNP 237          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_CLOBM (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=metK PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 8.837e-66
Identity = 128/236 (54.24%), Postives = 162/236 (68.64%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+CDQISDAVLDA L++DP  +VACET   T MVMV GEI+TK  VD  K+VR+T R IG+     G D + C V+ +I++QS DIA GV      +       + +GAGDQG MFG+AT+ET E+MP+   +A KL  RL+EVRKN T  +LRPDGKTQVTVEY N      PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P + LDE T + +NP
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAMGVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYENGK----PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENTKYFINP 235          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_CLOBH (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 8.837e-66
Identity = 128/236 (54.24%), Postives = 162/236 (68.64%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+CDQISDAVLDA L++DP  +VACET   T MVMV GEI+TK  VD  K+VR+T R IG+     G D + C V+ +I++QS DIA GV      +       + +GAGDQG MFG+AT+ET E+MP+   +A KL  RL+EVRKN T  +LRPDGKTQVTVEY N      PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P + LDE T + +NP
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAMGVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYENGK----PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENTKYFINP 235          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_CLOB1 (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 8.837e-66
Identity = 128/236 (54.24%), Postives = 162/236 (68.64%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+CDQISDAVLDA L++DP  +VACET   T MVMV GEI+TK  VD  K+VR+T R IG+     G D + C V+ +I++QS DIA GV      +       + +GAGDQG MFG+AT+ET E+MP+   +A KL  RL+EVRKN T  +LRPDGKTQVTVEY N      PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P + LDE T + +NP
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAMGVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYENGK----PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENTKYFINP 235          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_CLOBJ (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=metK PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.154e-65
Identity = 127/236 (53.81%), Postives = 162/236 (68.64%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+CDQISDAVLDA L++DP  +VACET   T MVMV GEI+TK  VD  K+VR+T R IG+     G D + C V+ +I++QS DIA GV      +       + +GAGDQG MFG+AT+ET E+MP+   +A KL  RL+EVRKN T  +LRPDGKTQVTVEY N      PVR+  ++ISTQH   +  ++I  D+KEHVIK ++P + LDE T + +NP
Sbjct:    4 LFTSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAMGVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYENGK----PVRIDAIVISTQHGPEIYLEQIEKDIKEHVIKVIVPSELLDENTKYFINP 235          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_BACCR (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=metK PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.154e-65
Identity = 136/238 (57.14%), Postives = 165/238 (69.33%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+CDQISD++LDA L +D  ++VACET   T +V+V GEITT   VD  KIVR+T + IG+     G DA+ C VL +I++QS DIA GV      R         E IGAGDQG MFG+A +ET E MPL   LA KL  RLTEVRK+ T S+LRPDGKTQVTVE Y++NG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINP 241          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_BACC4 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain B4264) GN=metK PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.154e-65
Identity = 136/238 (57.14%), Postives = 165/238 (69.33%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV EGHPDK+CDQISD++LDA L +D  ++VACET   T +V+V GEITT   VD  KIVR+T + IG+     G DA+ C VL +I++QS DIA GV      R         E IGAGDQG MFG+A +ET E MPL   LA KL  RLTEVRK+ T S+LRPDGKTQVTVE Y++NG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGQMTDAEIEAIGAGDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINP 241          
The following BLAST results are available for this feature:
BLAST of DY258060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CLOPH6.766e-6655.88S-adenosylmethionine synthetase OS=Clostridium phy... [more]
METK_CLOCE6.766e-6656.30S-adenosylmethionine synthetase OS=Clostridium cel... [more]
METK_CLOBL6.766e-6654.66S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_THEP38.837e-6655.04S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_CLOBM8.837e-6654.24S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBH8.837e-6654.24S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOB18.837e-6654.24S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBJ1.154e-6553.81S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_BACCR1.154e-6557.14S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC41.154e-6557.14S-adenosylmethionine synthetase OS=Bacillus cereus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DD07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258060 ID=DY258060; Name=DY258060; organism=Citrus clementina; type=EST; length=803bp
GGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGT
CTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGA
TGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGAC
AAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCA
GGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGG
TCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAG
ATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGG
TCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCC
CGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGAC
ATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGAC
CTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTC
GTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGAT
GGGAAGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCATGGT
CCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTG
TCACAAATGATGAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCT
GTCATCCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCC
ATC
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