DY258060

Overview
NameDY258060
Unique NameDY258060
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_SYNP2 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=metK PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.412e-55
Identity = 121/248 (48.79%), Postives = 159/248 (64.11%), Query Frame = 1
Query:  109 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP-------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETV--------TNDEIAADLKEHVIKPVI--PEKYLDEKTIFHLNP 801
            +LFTSESV EGHPDK+CDQISDA+LDA L  DP S+VA E  T T +V++ GE+TT+A V++ ++ R   + IG+ + D G  A+ C V+V +++QSPDIAQGV     +R        ++IGAGDQG MFGYA +ET EFMPL   LA +L  +L++VRK+    +L PDGKTQVTV Y +      PV + T+LISTQH ET+           +I ADL E VIKPV       L + T F +NP
Sbjct:    5 YLFTSESVTEGHPDKICDQISDAILDAVLAADPSSRVAAEVVTNTGLVLITGELTTQANVNFIQVARQKIKEIGYTNADNGFSANSCSVMVALDEQSPDIAQGVTSAQEQRDKLSDDQLDEIGAGDQGLMFGYACNETPEFMPLPISLAHRLSLKLSQVRKSGELPYLGPDGKTQVTVIYEDGK----PVGIDTILISTQHTETIGALTDNTEIQAKIKADLLEKVIKPVFVGATVGLSDSTKFLVNP 248          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_DESVV (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=metK PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.412e-55
Identity = 114/225 (50.67%), Postives = 149/225 (66.22%), Query Frame = 1
Query:  109 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVI-PEKYLDEK 780
            + FTSESV EGHPDK+ DQISDAVLD  L QDP S+VACET   T M ++ GEITT+   D   +VR+T R+IG+ S ++G D   C V+ +I++QS DIAQGV        ED GAGDQG MFG+A DET+  MP     A +L  RLTEVRK+ T    RPDGKTQV+ EY +      PVR++ V++STQH ++ +  +I   +K HVI+P++ P  + DEK
Sbjct:    8 YYFTSESVTEGHPDKVADQISDAVLDVLLAQDPNSRVACETLVTTGMAVIAGEITTRGYADLPHVVRETIRNIGYNSSEMGFDWQTCAVISSIDKQSADIAQGVD---RATNEDQGAGDQGMMFGFACDETATLMPAPIYWAHQLSQRLTEVRKDGTVDIFRPDGKTQVSFEYVDGK----PVRINNVVVSTQHKDSASQADIIDAVKTHVIRPILEPSGFFDEK 225          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_DESVH (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=metK PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.412e-55
Identity = 114/225 (50.67%), Postives = 149/225 (66.22%), Query Frame = 1
Query:  109 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVI-PEKYLDEK 780
            + FTSESV EGHPDK+ DQISDAVLD  L QDP S+VACET   T M ++ GEITT+   D   +VR+T R+IG+ S ++G D   C V+ +I++QS DIAQGV        ED GAGDQG MFG+A DET+  MP     A +L  RLTEVRK+ T    RPDGKTQV+ EY +      PVR++ V++STQH ++ +  +I   +K HVI+P++ P  + DEK
Sbjct:    8 YYFTSESVTEGHPDKVADQISDAVLDVLLAQDPNSRVACETLVTTGMAVIAGEITTRGYADLPHVVRETIRNIGYNSSEMGFDWQTCAVISSIDKQSADIAQGVD---RATNEDQGAGDQGMMFGFACDETATLMPAPIYWAHQLSQRLTEVRKDGTVDIFRPDGKTQVSFEYVDGK----PVRINNVVVSTQHKDSASQADIIDAVKTHVIRPILEPSGFFDEK 225          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_BIFAA (S-adenosylmethionine synthetase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=metK PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.412e-55
Identity = 120/233 (51.50%), Postives = 146/233 (62.66%), Query Frame = 1
Query:  103 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---------HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 774
            E  L ++ESV EGHPDK+CDQISDA+LD  L QDP S VA ETC       VFGE+T++   D + IVR   R+IG+ S  VGLDAD C V V++ +QSP+I QGV              +R E  GAGDQG MFGYA DET   MPL   LA +L  RL EVRK+     LRPDGKTQVT+EY +D+    PVR+ TVL+STQHD  V    +   L EHVI+PV+ +   D
Sbjct:    3 ELKLISAESVTEGHPDKVCDQISDAILDDMLAQDPHSHVAVETCATVGQFFVFGEVTSEGYSDIQNIVRSVVRNIGYTSSRVGLDADSCGVTVSLTEQSPEINQGVARLSGEEESKASREQRYEAQGAGDQGVMFGYACDETDVLMPLPIHLAHRLAYRLAEVRKSGEVPHLRPDGKTQVTIEYDDDDH---PVRLDTVLVSTQHDPEVDQAWLKEQLTEHVIRPVLDDVLAD 232          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_AZOSB (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain BH72) GN=metK PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.150e-55
Identity = 112/231 (48.48%), Postives = 154/231 (66.67%), Query Frame = 1
Query:  109 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            FLFTSESV+EGHPDK+ DQISD VLDA L +DP+++VACET   T +V++ GEITT A  +Y +I +D  R IG+ + D+G D   C VL  I +QS DIAQGV+        D GAGDQG MFGYAT+ET   MPL    A ++  R  EVRK+    WLRPD K+Q+TV+Y +      PV + TV++STQH+  V++ +I+  + E +IKPV+P++ +  +  + +NP
Sbjct:    5 FLFTSESVSEGHPDKVADQISDGVLDAILAEDPKARVACETLVSTGLVVISGEITTSAHPNYREIAQDVVRRIGYDNSDIGFDYKSCAVLAAINRQSSDIAQGVN-EGEGLDLDQGAGDQGLMFGYATNETPSLMPLPIYYAHRIMQRQAEVRKDGRLPWLRPDAKSQLTVKYVDGK----PVAIDTVVVSTQHNPEVSHAQISEAVIEEIIKPVLPKELMQGEVRYLINP 230          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_PSYWF (S-adenosylmethionine synthetase OS=Psychrobacter sp. (strain PRwf-1) GN=metK PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.114e-55
Identity = 111/230 (48.26%), Postives = 151/230 (65.65%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV+EGHPDK+ DQISDA+LDA + +D  ++VACET  KT  V++ GEI+T A +D E+IVRDT  SIG+   D+G D + C V+  I +QSP+IAQGV       PED GAGDQG MFGYA++ET   MP     A +L  R +E+R++    WLRPD K QVT++Y N      P  +  V++STQHD  ++  ++   + E++IK V+P   L   T +H+NP
Sbjct:    6 LFTSESVSEGHPDKMADQISDALLDAIMREDLHARVACETLVKTGAVVLAGEISTTANIDIERIVRDTVNSIGYNHSDLGFDGETCAVINMIGKQSPEIAQGVD---RMNPEDQGAGDQGLMFGYASNETEVLMPAPIEFAHRLMERQSELRRSGELKWLRPDAKAQVTLKYTNG----TPSAIDAVVLSTQHDPDISQADLQEAVMENIIKHVLPADLLHAGTRYHINP 228          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_PSYCK (S-adenosylmethionine synthetase OS=Psychrobacter cryohalolentis (strain K5) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.373e-55
Identity = 111/230 (48.26%), Postives = 151/230 (65.65%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VACET  KT  V++ GEITT A +D E+IVRDT   IG+   D+G D + C V+  + +QSP+IAQGV       PE+ GAGDQG MFGYA++ET   MP     A +L  R +E+R+     WLRPD K QVT++Y  +     PV +  V++STQHD +++  ++   + E +IK V+P + L   T +H+NP
Sbjct:    6 LFTSESVSEGHPDKMADQISDAILDAILRQDLHARVACETLVKTGAVVLAGEITTTANIDVERIVRDTVNGIGYHHSDLGFDGETCAVINMLGKQSPEIAQGVD---RADPEEQGAGDQGLMFGYASNETEVLMPAPIEYAHRLMERQSELRRAGELPWLRPDAKAQVTLKYDGNK----PVAIDAVVLSTQHDPSISQADLQEAIMESIIKQVLPAELLHAGTRYHINP 228          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_PROM2 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9215) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.373e-55
Identity = 122/249 (49.00%), Postives = 164/249 (65.86%), Query Frame = 1
Query:  100 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGVHGHFTKR---PEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHD---ETVTNDE-----IAADLKEHVIKPVIPEKYLDE---KTIFHLNP 801
            M  F+FTSESV EGHPDK+CDQISDAVLDA L +DPES+VACET   T + ++ GEIT+KAKVDY K+VR+  + IG+      G DA+ C VLV +++QSPDI+QGV+          ++ GAGDQG MFGYA DET E MPL   LA +L  +L +VR  +  ++L PDGKTQV+++Y       +PV ++T+LISTQH+   + +TN+E     I  DL +HV+ P   +  +     KT F +NP
Sbjct:    1 MSDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSKAKVDYIKLVRNVIKEIGYEGYKAGGFDANSCAVLVALDEQSPDISQGVNEADDVNDDLEDNTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLAKVRHENLLNYLLPDGKTQVSIDYEKG----LPVSINTILISTQHNPEIDGLTNEEEIRQRIKEDLWKHVVIPATEDLEIKPNIIKTRFLVNP 245          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_PROMS (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain AS9601) GN=metK PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 7.018e-55
Identity = 121/249 (48.59%), Postives = 166/249 (66.67%), Query Frame = 1
Query:  100 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGVHGHFTKR---PEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHD---ETVTNDE-----IAADLKEHVIKPVIPEKYLD---EKTIFHLNP 801
            M  F+FTSESV EGHPDK+CDQISDAVLDA L +DPES+VACET   T + ++ GEIT+KAKVDY K+VR+  + IG+      G DA+ C VLV +++QSPDI+QGV+          ++ GAGDQG MFGYA DET E MPL   LA +L  +L++VR  +  ++L PDGKTQV+++Y N     VP+ ++T+LISTQH+   + +TN+E     I  DL ++V+ P   +  +    + T F +NP
Sbjct:    1 MSDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSKAKVDYIKLVRNVIKEIGYEGYRAGGFDANSCAVLVALDEQSPDISQGVNEADDVNDDLEDNTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLSKVRHENMLNYLLPDGKTQVSIDYKNG----VPLSINTILISTQHNPEIDGITNEEEIRQRIKEDLWKNVVLPATEDLEIKPNIQTTRFLVNP 245          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_PROM9 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9312) GN=metK PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 7.018e-55
Identity = 122/249 (49.00%), Postives = 162/249 (65.06%), Query Frame = 1
Query:  100 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGVH---GHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHD---ETVTNDE-----IAADLKEHVIKPVIPEKYLD---EKTIFHLNP 801
            M  F+FTSESV EGHPDK+CDQISDAVLDA L +DPES+VACET   T + ++ GEIT+KAKVDY K+VR+  + IG+      G DA+ C VLV +++QSPDI+QGV+          ++ GAGDQG MFGYA DET E MPL   LA +L  +L +VR     ++L PDGKTQV+++Y       +PV ++T+LISTQH+   + +TN+E     I  DL  HV+ P   +  +     KT F +NP
Sbjct:    1 MSDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSKAKVDYIKLVRNVIKEIGYEGYRAGGFDANSCAVLVALDEQSPDISQGVNYADDVNDDLEDNTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLAKVRHEEVLNYLLPDGKTQVSIDYEKG----LPVSINTILISTQHNPEIDGITNEEEIRQRIKEDLWTHVVIPATEDLKIKPNISKTRFLVNP 245          
The following BLAST results are available for this feature:
BLAST of DY258060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SYNP22.412e-5548.79S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_DESVV2.412e-5550.67S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_DESVH2.412e-5550.67S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_BIFAA2.412e-5551.50S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_AZOSB3.150e-5548.48S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]
METK_PSYWF4.114e-5548.26S-adenosylmethionine synthetase OS=Psychrobacter s... [more]
METK_PSYCK5.373e-5548.26S-adenosylmethionine synthetase OS=Psychrobacter c... [more]
METK_PROM25.373e-5549.00S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_PROMS7.018e-5548.59S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_PROM97.018e-5549.00S-adenosylmethionine synthetase OS=Prochlorococcus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DD07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258060 ID=DY258060; Name=DY258060; organism=Citrus clementina; type=EST; length=803bp
GGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGT
CTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGA
TGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGAC
AAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCA
GGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGG
TCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAG
ATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGG
TCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCC
CGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGAC
ATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGAC
CTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTC
GTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGAT
GGGAAGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCATGGT
CCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTG
TCACAAATGATGAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCT
GTCATCCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCC
ATC
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