DY258060

Overview
NameDY258060
Unique NameDY258060
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_MYXXA (S-adenosylmethionine synthetase OS=Myxococcus xanthus GN=metK PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.667e-54
Identity = 113/231 (48.92%), Postives = 148/231 (64.07%), Query Frame = 1
Query:  109 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            FLFTSESV EGHPDK+ DQISD VLDA + +DP+++VA ET  KT + +V GE+TT   VD  K+VR T   IG+    +G D + C V+V IE QS DIA+GV        +D GAGDQG MFG+A DET E MP     A  +  RL +VR+     W+RPDGK+QVTVEY +      P R+  V++STQH + V+N +I   ++E VI   +P+K +D KT F +NP
Sbjct:    5 FLFTSESVTEGHPDKIADQISDGVLDAIIAKDPQARVAVETLVKTGLAIVAGEVTTNCYVDIPKLVRSTICRIGYTDSSMGYDGNTCGVMVAIEGQSQDIARGV-----DNKKDQGAGDQGMMFGFACDETPELMPAPIHYAHAITRRLADVRRKQH-PWIRPDGKSQVTVEYRDGR----PARIDAVVVSTQHSDEVSNKKIQEAIREDVIANALPKKLIDNKTKFFINP 225          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_MARMS (S-adenosylmethionine synthetase OS=Marinomonas sp. (strain MWYL1) GN=metK PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.667e-54
Identity = 114/233 (48.93%), Postives = 152/233 (65.24%), Query Frame = 1
Query:  103 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA L +DPE++VACET  KT MV+V GE+ T A VD E+I R   R IG+ S D+G D + C V+  I +QS DIA GV         + GAGDQG MFG+AT+ET   MP     A +L  R  EVRKN T  +LRPD K+QVT   Y++NG   P  +  V++STQH  +V   ++   + E +IKPV+P ++L ++T + +NP
Sbjct:    3 EYSLFTSESVSEGHPDKIADQVSDAILDAILAEDPEARVACETLVKTGMVLVAGEVRTNAWVDIEEIARGVIREIGYNSSDMGFDWESCAVMNAIGKQSADIAVGVD---EAGEHEQGAGDQGLMFGFATNETDVLMPAPITYAHRLVQRQAEVRKNGTLDFLRPDAKSQVTFR-YDENGK--PCAIDAVVLSTQHSASVKQADLREAVMEEIIKPVLPAEWLSKETKYFINP 229          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_CLAM3 (S-adenosylmethionine synthetase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=metK PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.667e-54
Identity = 114/223 (51.12%), Postives = 145/223 (65.02%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI--------GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVI 756
            LFTSESV EGHPDK+CDQISD++LDA L QDP S+ A ET   T +V V GE+TT   VD  +IVRD  R IG+ S +VG D  +C V V+I  QSPDIAQGV   +  R            GAGDQG MFGYA+ +T  FMPL   LA +L  RL  VR +   ++LRPDGKTQVT+ Y      +VP  V TV++STQH   V+ +++  +++EHVI+PV+
Sbjct:    6 LFTSESVTEGHPDKICDQISDSILDALLTQDPTSRAAVETLVTTGLVHVAGEVTTSGYVDIPQIVRDRIRDIGYDSSEVGFDGSNCGVTVSIGAQSPDIAQGVDRSYESRSGSASTDAHDLQGAGDQGLMFGYASRDTPVFMPLPIYLAHRLAERLAAVRHSGELAYLRPDGKTQVTIGY----EGLVPRTVDTVVLSTQHGPQVSQEDLRREVEEHVIRPVL 224          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_ACTPJ (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=metK PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.483e-54
Identity = 113/230 (49.13%), Postives = 147/230 (63.91%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   D+G DA  C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  +  +VRK+    WLRPD K+Q+T  Y N+      V +  V++STQH E V+  ++   + E +IKPV+P ++L + T + +NP
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPDINQGVD---RADPLEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMEQQAKVRKSGKLDWLRPDAKSQLTFAYENNK----IVGIDAVVLSTQHAEHVSQKDLVEGVMEEIIKPVLPSEWLSQNTKYFINP 227          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_ACTP7 (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=metK PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.483e-54
Identity = 113/230 (49.13%), Postives = 147/230 (63.91%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   D+G DA  C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  +  +VRK+    WLRPD K+Q+T  Y N+      V +  V++STQH E V+  ++   + E +IKPV+P ++L + T + +NP
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPDINQGVD---RADPLEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMEQQAKVRKSGKLDWLRPDAKSQLTFAYENNK----IVGIDAVVLSTQHAEHVSQKDLVEGVMEEIIKPVLPSEWLSQNTKYFINP 227          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_ACTP2 (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=metK PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.483e-54
Identity = 113/230 (49.13%), Postives = 147/230 (63.91%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   D+G DA  C VL  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  +  +VRK+    WLRPD K+Q+T  Y N+      V +  V++STQH E V+  ++   + E +IKPV+P ++L + T + +NP
Sbjct:    5 LFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPDINQGVD---RADPLEQGAGDQGIMFGYATNETDVLMPAPITYAHRLMEQQAKVRKSGKLDWLRPDAKSQLTFAYENNK----IVGIDAVVLSTQHAEHVSQKDLVEGVMEEIIKPVLPSEWLSQNTKYFINP 227          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_PROMP (S-adenosylmethionine synthetase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=metK PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.549e-54
Identity = 122/250 (48.80%), Postives = 162/250 (64.80%), Query Frame = 1
Query:  100 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI----GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHD---ETVTNDE-----IAADLKEHVIKPVIPE---KYLDEKTIFHLNP 801
            M  F+FTSESV EGHPDK+CDQISDAVLDA L +DPES+VACET   T + ++ GEIT++AK+DY K+VR   + IG+      G D++ C VLV +++QSPDI+QGV+       ED+    GAGDQG MFGYA DET E MPL   LA +L  +L +VR      +L PDGKTQV+++Y       VPV ++T+LISTQH    + +TN+E     I  DL  +V+ P   +   K  ++KT F +NP
Sbjct:    1 MSDFIFTSESVTEGHPDKICDQISDAVLDALLSEDPESRVACETVVNTGLCLLTGEITSRAKLDYIKLVRKVIKEIGYEGSKAGGFDSNSCAVLVALDEQSPDISQGVN-EADDINEDLENNTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLAKVRHEKVLDYLLPDGKTQVSIDYKKG----VPVSINTILISTQHTAEIDGITNEEEIRQKIKEDLWINVVLPATEDLEIKPSNQKTRFLVNP 245          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_PROM5 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9515) GN=metK PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.549e-54
Identity = 122/250 (48.80%), Postives = 161/250 (64.40%), Query Frame = 1
Query:  100 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI----GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKPVIPE---KYLDEKTIFHLNP 801
            M  F+FTSESV EGHPDK+CDQISDAVLDA L++DPES+VACET   T + ++ GEIT++AK+DY K+VR   + IG+      G D++ C VLV +++QSPDI+QGV+       ED+    GAGDQG MFGYA DET E MPL   LA +L  +L +VR  +   +L PDGKTQV+++Y       VPV ++T+LISTQH        +E     +I  DL  +V+ PV  +   K   EKT F +NP
Sbjct:    1 MSDFIFTSESVTEGHPDKICDQISDAVLDALLKEDPESRVACETVVNTGLCLLTGEITSRAKLDYIKLVRKVIKEIGYEGAKAGGFDSNSCAVLVALDEQSPDISQGVN-EADDLNEDLENNTGAGDQGIMFGYACDETPELMPLPISLAHRLARQLAKVRHENVLEYLLPDGKTQVSIDYKKG----VPVSINTILISTQHRAEIDGIINEKEIRQKITDDLWINVVLPVTEDLEIKPSKEKTRFLVNP 245          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_BORPE (S-adenosylmethionine synthetase OS=Bordetella pertussis GN=metK PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.549e-54
Identity = 116/234 (49.57%), Postives = 148/234 (63.25%), Query Frame = 1
Query:  109 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP ++VA ET   T +V++ GEITT A VDY ++ RDT R IG+ + + G+D   C VLV  ++QSPDIAQGV     +  ED    GAGDQG MFGYA DET + MP     A +L  R +E+RK+    WLRPD K+QVT  Y +      P  V TV++STQH   ++   I   + E +IKP  PE  +  KT F +NP
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRHIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRYVDGR----PAEVDTVVLSTQHSPEISQASIREAVIEDIIKPSFPEGLITPKTKFLVNP 231          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_BORPA (S-adenosylmethionine synthetase OS=Bordetella parapertussis GN=metK PE=3 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 4.549e-54
Identity = 116/234 (49.57%), Postives = 148/234 (63.25%), Query Frame = 1
Query:  109 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP ++VA ET   T +V++ GEITT A VDY ++ RDT R IG+ + + G+D   C VLV  ++QSPDIAQGV     +  ED    GAGDQG MFGYA DET + MP     A +L  R +E+RK+    WLRPD K+QVT  Y +      P  V TV++STQH   ++   I   + E +IKP  PE  +  KT F +NP
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRHIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRYVDGR----PAEVDTVVLSTQHSPEISQASIREAVIEDIIKPSFPEGLITPKTKFLVNP 231          
The following BLAST results are available for this feature:
BLAST of DY258060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_MYXXA2.667e-5448.92S-adenosylmethionine synthetase OS=Myxococcus xant... [more]
METK_MARMS2.667e-5448.93S-adenosylmethionine synthetase OS=Marinomonas sp.... [more]
METK_CLAM32.667e-5451.12S-adenosylmethionine synthetase OS=Clavibacter mic... [more]
METK_ACTPJ3.483e-5449.13S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_ACTP73.483e-5449.13S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_ACTP23.483e-5449.13S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_PROMP4.549e-5448.80S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_PROM54.549e-5448.80S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_BORPE4.549e-5449.57S-adenosylmethionine synthetase OS=Bordetella pert... [more]
METK_BORPA4.549e-5449.57S-adenosylmethionine synthetase OS=Bordetella para... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DD07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258060 ID=DY258060; Name=DY258060; organism=Citrus clementina; type=EST; length=803bp
GGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGT
CTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGA
TGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGAC
AAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCA
GGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGG
TCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAG
ATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGG
TCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCC
CGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGAC
ATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGAC
CTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTC
GTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGAT
GGGAAGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCATGGT
CCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTG
TCACAAATGATGAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCT
GTCATCCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCC
ATC
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