DY258060

Overview
NameDY258060
Unique NameDY258060
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_PROM4 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9211) GN=metK PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.324e-53
Identity = 118/249 (47.39%), Postives = 154/249 (61.85%), Query Frame = 1
Query:  100 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKPVIPEKYL---DEKTIFHLNP 801
            M  F+FTSESV EGHPDK+CDQISDAVLDA L QDP S+VACE    T + ++ GE+T+ A+VD+  +VR   + IG+      G DA+ C VLV +++QSPDIA+GV     H     + IGAGDQG MFGYA +ET E MPL   LA +L  +L ++R   T  +L PDGKTQV+V Y N+     P+ + T++ISTQH         E    + I  DL E+V+KP   +  L    EKT F +NP
Sbjct:    1 MSQFVFTSESVTEGHPDKICDQISDAVLDALLTQDPHSRVACEAVVNTGLCLITGEVTSTAEVDFINLVRSVIKEIGYKDAQAGGFDANSCAVLVALDKQSPDIAKGVDTAEDHTDDPFDKIGAGDQGIMFGYACNETPELMPLPISLAHRLARQLAKIRHQGTLKYLLPDGKTQVSVIYENNE----PIAIDTIVISTQHTSEIDDLSSEADIRERITKDLWEYVVKPATSDLKLQPNQEKTRFLVNP 245          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_DESVM (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=metK PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.324e-53
Identity = 114/228 (50.00%), Postives = 147/228 (64.47%), Query Frame = 1
Query:  109 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL-DEKTIF 789
            + FTSESV EGHPDK+ DQISDAVLD  L QDP S+VACET   T M  + GEI TK   D  ++VR T R+IG+ S ++G D   C V+ +I++QS DIAQGV       PED GAGDQG MFG+A DET   MP     A +L  RLT+VRK+    +LRPDGKTQV+ EY +      PV ++ V++S+QH + V+ND I   + E VI+  +PE  + D+  IF
Sbjct:    8 YFFTSESVTEGHPDKVADQISDAVLDVLLAQDPMSRVACETLVTTGMAFIAGEIRTKGFADLPEVVRSTIRNIGYNSSEMGFDWKTCAVISSIDKQSGDIAQGVD---RGNPEDQGAGDQGMMFGFACDETPTLMPAPIYWAHQLSQRLTQVRKDGILDFLRPDGKTQVSFEYVDGK----PVHINNVVVSSQHADNVSNDTIREGIIEEVIRKTLPEGLMADDCEIF 228          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_COXBU (S-adenosylmethionine synthetase OS=Coxiella burnetii GN=metK PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.324e-53
Identity = 109/232 (46.98%), Postives = 147/232 (63.36%), Query Frame = 1
Query:  106 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            T LFTSESV+EGHPDK+ DQISDAVLDA + QDP  +VACE   K+ MV V GEITT A  D E+I R+T   IG+    +G D + C V+  I +QSPDI  GV G   +  +++GAGDQG MFGYA+ ET+ FMP     A +L  +   +RKN    WLRPD K+QVT+ Y N      PV    +++STQH   ++ + +   + + +IKP++P  +LD+ T F +NP
Sbjct:    4 TTLFTSESVSEGHPDKVADQISDAVLDALIGQDPNCRVACEAVVKSGMVFVAGEITTNAWADVEQITRNTVLQIGYNDPHLGFDGETCAVVTAIGKQSPDIVMGVDG---REDQELGAGDQGLMFGYASRETNVFMPAPITYAHRLVRQQALLRKNGRLPWLRPDAKSQVTLRYENGK----PVAADCIVLSTQHSPEISQESLREAVIDEIIKPIMPPHWLDKHTRFLVNP 228          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_SYNJB (S-adenosylmethionine synthetase OS=Synechococcus sp. GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.729e-53
Identity = 121/246 (49.19%), Postives = 153/246 (62.20%), Query Frame = 1
Query:  112 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR--PED----IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKPVIPEKYL--DEKTIFHLNP 801
            +F+SESV EGHPDK+CDQISDA++DA L  DP S+VA E    T +V++ GEIT++A+V++ ++VRD    IG+     G  A+ C VLV  ++QSPDIAQGV+     R   ED    +GAGDQG MFG+A DET E MPL   LA +L  +L  VRKN T  +LRPDGKTQVTV Y        PV +HT+LISTQH        +E    + I ADL E V+ PV  E  +  D  T F  NP
Sbjct:    1 MFSSESVTEGHPDKICDQISDAIVDALLTADPLSRVAAEVVVNTGLVLLTGEITSQAQVNFTRLVRDKVAEIGYTDAKNGFCAESCAVLVAFDEQSPDIAQGVNMALESRGSQEDQFDLVGAGDQGLMFGFACDETPELMPLPISLAHRLSRQLATVRKNGTLPYLRPDGKTQVTVAYEEGR----PVGIHTLLISTQHTPTIGAITEEAAVQERIRADLWEAVVTPVFAELPIKPDSHTRFLTNP 242          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_COXBR (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.729e-53
Identity = 109/232 (46.98%), Postives = 146/232 (62.93%), Query Frame = 1
Query:  106 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            T LFTSESV+EGHPDK+ DQISDAVLDA + QDP  +VACE   K+ MV V GEITT A  D E+I R+T   IG+    +G D + C V+  I +QSPDI  GV G   +  +++GAGDQG MFGYA+ ET  FMP     A +L  +   +RKN    WLRPD K+QVT+ Y N      PV    +++STQH   ++ + +   + + +IKP++P  +LD+ T F +NP
Sbjct:    4 TTLFTSESVSEGHPDKVADQISDAVLDALIGQDPNCRVACEAVVKSGMVFVAGEITTNAWADVEQITRNTVLQIGYNDPHLGFDGETCAVVTAIGKQSPDIVMGVDG---REDQELGAGDQGLMFGYASRETDVFMPAPITYAHRLVRQQALLRKNGRLPWLRPDAKSQVTLRYENGK----PVAADCIVLSTQHSPEISQESLREAVIDEIIKPIMPPHWLDKHTRFLVNP 228          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_COXB2 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuG_Q212) GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.729e-53
Identity = 109/232 (46.98%), Postives = 146/232 (62.93%), Query Frame = 1
Query:  106 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            T LFTSESV+EGHPDK+ DQISDAVLDA + QDP  +VACE   K+ MV V GEITT A  D E+I R+T   IG+    +G D + C V+  I +QSPDI  GV G   +  +++GAGDQG MFGYA+ ET  FMP     A +L  +   +RKN    WLRPD K+QVT+ Y N      PV    +++STQH   ++ + +   + + +IKP++P  +LD+ T F +NP
Sbjct:    4 TTLFTSESVSEGHPDKVADQISDAVLDALIGQDPNCRVACEAVVKSGMVFVAGEITTNAWADVEQITRNTVLQIGYNDPHLGFDGETCAVVTAIGKQSPDIVMGVDG---REDQELGAGDQGLMFGYASRETDVFMPAPITYAHRLVRQQALLRKNGRLPWLRPDAKSQVTLRYENGK----PVAADCIVLSTQHSPEISQESLREAVIDEIIKPIMPPHWLDKHTRFLVNP 228          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_COXB1 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuK_Q154) GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.729e-53
Identity = 109/232 (46.98%), Postives = 146/232 (62.93%), Query Frame = 1
Query:  106 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            T LFTSESV+EGHPDK+ DQISDAVLDA + QDP  +VACE   K+ MV V GEITT A  D E+I R+T   IG+    +G D + C V+  I +QSPDI  GV G   +  +++GAGDQG MFGYA+ ET  FMP     A +L  +   +RKN    WLRPD K+QVT+ Y N      PV    +++STQH   ++ + +   + + +IKP++P  +LD+ T F +NP
Sbjct:    4 TTLFTSESVSEGHPDKVADQISDAVLDALIGQDPNCRVACEAVVKSGMVFVAGEITTNAWADVEQITRNTVLQIGYNDPHLGFDGEACAVVTAIGKQSPDIVMGVDG---REDQELGAGDQGLMFGYASRETDVFMPAPITYAHRLVRQQALLRKNGRLPWLRPDAKSQVTLRYENGK----PVAADCIVLSTQHSPEISQESLREAVIDEIIKPIMPPHWLDKHTRFLVNP 228          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_ANAVT (S-adenosylmethionine synthetase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=metK PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.729e-53
Identity = 120/248 (48.39%), Postives = 151/248 (60.89%), Query Frame = 1
Query:  109 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKPVIPEKYL--DEKTIFHLNP 801
            +LFTSESV EGHPDK+CDQISD +LD  L QDP S+VA E    T +V++ GEITTKA V+Y  I R     IG+ + D G  A    V+V +++QSPDIAQGV+     R +D       IGAGDQG MFG+A +ET E MPL   LA ++  RL  VRK    S+LRPDGKTQVTV Y +      PV + TVLISTQH        DE     +I  DL   V++PV  +  +  D++T F +NP
Sbjct:    5 YLFTSESVTEGHPDKICDQISDTILDTLLTQDPTSRVAAEVVVNTGLVLITGEITTKANVNYANIARQKIAEIGYTNADNGFSASSTSVIVALDEQSPDIAQGVNTAQETREQDSEELFDKIGAGDQGIMFGFACNETPELMPLPICLAHRIARRLAAVRKTGELSYLRPDGKTQVTVVYEDGR----PVGIDTVLISTQHTATIGDITDEAAVQAKIKQDLWTAVVEPVFGDLEIKPDQETRFLVNP 248          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_SYNFM (S-adenosylmethionine synthetase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=metK PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.258e-53
Identity = 111/236 (47.03%), Postives = 151/236 (63.98%), Query Frame = 1
Query:  100 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH---GHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLN 798
            M  FLFTSESV EGHPDK+ DQISD++LDA + +D  ++VACET   T +  V GEITT + VD   I+R T + IG+    +G D   C V+ +I++QSPDIAQGV+   G F    E+ GAGDQG MFG+A +ET  FMP+    A ++  +L EVRKN    +LRPDGK+QVTVEY +      P R+ T++++ QH   V+   I   + E VIK V P + +D+KT + +N
Sbjct:    3 MSNFLFTSESVTEGHPDKVADQISDSILDAIITEDKTARVACETLVTTGLAFVAGEITTSSWVDIPDIIRSTIKGIGYNDSSMGFDWSTCAVITSIDKQSPDIAQGVNPGEGLF----EEQGAGDQGLMFGFACNETPVFMPMPIYYAHRITRKLAEVRKNGVLEFLRPDGKSQVTVEYDDHR----PKRIDTIVVAAQHAPNVSYSMIRESIIEEVIKKVFPPELIDDKTKYFIN 230          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_PSEFS (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain SBW25) GN=metK PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.258e-53
Identity = 114/233 (48.93%), Postives = 149/233 (63.95%), Query Frame = 1
Query:  103 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            E  LFTSESV+EGHPDK+ DQISDAVLDA + +D  ++VACET  KT + ++ GE+TT A VD E+IVRD    IG+ S DVG D   C V+  I +QSPDI QGV      +PED GAGDQG MFGYA++ET   MP     + +L  R  E RK+    WLRPD K+QVT  Y    G  V V +  V++STQH+  V+  ++   + E ++K V+P + L + T FH+NP
Sbjct:    3 EYSLFTSESVSEGHPDKIADQISDAVLDAIIAEDKFARVACETLVKTGVAIIAGEVTTTAWVDLEQIVRDVITDIGYTSSDVGFDGATCGVMNIIGKQSPDINQGVD---RAKPEDQGAGDQGLMFGYASNETDVLMPAPITFSHQLVQRQAEARKSGLLPWLRPDAKSQVTCRY---EGGKV-VGIDAVVLSTQHNPDVSYADLREGVMELIVKHVLPAELLSKDTQFHINP 228          
The following BLAST results are available for this feature:
BLAST of DY258060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PROM41.324e-5347.39S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_DESVM1.324e-5350.00S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_COXBU1.324e-5346.98S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_SYNJB1.729e-5349.19S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_COXBR1.729e-5346.98S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB21.729e-5346.98S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB11.729e-5346.98S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_ANAVT1.729e-5348.39S-adenosylmethionine synthetase OS=Anabaena variab... [more]
METK_SYNFM2.258e-5347.03S-adenosylmethionine synthetase OS=Syntrophobacter... [more]
METK_PSEFS2.258e-5348.93S-adenosylmethionine synthetase OS=Pseudomonas flu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DD07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258060 ID=DY258060; Name=DY258060; organism=Citrus clementina; type=EST; length=803bp
GGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGT
CTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGA
TGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGAC
AAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCA
GGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGG
TCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAG
ATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGG
TCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCC
CGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGAC
ATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGAC
CTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTC
GTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGAT
GGGAAGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCATGGT
CCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTG
TCACAAATGATGAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCT
GTCATCCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCC
ATC
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