DY258060

Overview
NameDY258060
Unique NameDY258060
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_SCHPO (S-adenosylmethionine synthetase OS=Schizosaccharomyces pombe GN=sam1 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.028e-78
Identity = 134/233 (57.51%), Postives = 184/233 (78.97%), Query Frame = 1
Query:  103 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            +TFLFTSESV EGHPDK+CDQISDA+LDACL+ DP SKVACET +KT MVMVFGEITT++++DY+K++R+T +SIG+   + G D   C VLV IEQQSPDIAQG+  H+ K  E++GAGDQG MFGYATDET E +PL+ +LA KL A ++  R++ +  WLRPD KTQVT+EY  +NGA++P RV T+++S QH ++++ +++ +++ E +IKP +P   LDEKT++H+ P
Sbjct:    3 QTFLFTSESVGEGHPDKICDQISDAILDACLKDDPFSKVACETASKTGMVMVFGEITTRSQIDYQKVIRNTIKSIGYDDSEKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKALEELGAGDQGIMFGYATDETPEKLPLTILLAHKLNAAMSVARRDGSLPWLRPDTKTQVTIEYEEENGAVIPRRVDTIVVSAQHADSISTEDLRSEILEKIIKPTVPAHLLDEKTVYHIQP 233          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_NEUCR (S-adenosylmethionine synthetase OS=Neurospora crassa GN=eth-1 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 7.705e-78
Identity = 138/232 (59.48%), Postives = 176/232 (75.86%), Query Frame = 1
Query:  106 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            TFLFTSESV EGHPDK+ DQ+SDA+LDACL +DP SKVACET TKT M+MVFGEITTKAK+DY+K+VR+  + IG+     G D   C +LV IE+QSPDIAQG+  H   R E++GAGDQG MFGYATDET E  PL+ + A KL A ++  R++ +  WLRPD KTQVT+EY +DNGA+VP+RV TV++S QH   +T +E+  ++ E +IK  IP KYLDEKT++H+ P
Sbjct:   16 TFLFTSESVGEGHPDKIADQVSDAILDACLAEDPLSKVACETATKTGMIMVFGEITTKAKLDYQKVVRNAIKDIGYDDSSKGFDYKTCNLLVAIEEQSPDIAQGL--HLDDRLENLGAGDQGIMFGYATDETPELFPLTLLFAHKLNAAMSAARRDGSLPWLRPDTKTQVTIEYKHDNGAVVPLRVDTVVVSAQHAPEITTEELRKEILEKIIKTTIPAKYLDEKTVYHIQP 245          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK1_BOVIN (S-adenosylmethionine synthetase isoform type-1 OS=Bos taurus GN=MAT1A PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.717e-77
Identity = 141/241 (58.51%), Postives = 180/241 (74.69%), Query Frame = 1
Query:   79 CQPQLDKMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            C   L +   F+FTSESV EGHPDK+CDQISDAVLDA L+QDP +KVACET  KT MV++ GEIT+ A VDY+++VR+T + IG+     G D   C VLV +EQQSPDIAQ VH    +  ED+GAGDQG MFGYATDET E MPL+ +LA +L AR+ E+R++    WL+PD KTQVTV+Y  DNGA++P+RVHTV+IS QH+E +T +++   LKE VI+ V+P +YLDE TI+HL P
Sbjct:    9 CDHSLSEEGAFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRETIQHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVH--LDRNEEDVGAGDQGLMFGYATDETEECMPLTIMLAHRLNARMAELRRSGQLPWLQPDSKTQVTVQYTQDNGAVIPMRVHTVVISVQHNEDITLEDMRRALKEQVIRAVVPARYLDEDTIYHLQP 247          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_ASCIM (S-adenosylmethionine synthetase OS=Ascobolus immersus PE=3 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.242e-77
Identity = 138/232 (59.48%), Postives = 176/232 (75.86%), Query Frame = 1
Query:  106 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            +FLFTSESV EGHPDK+ DQ+SDAVLDACL +DP SKVACET TKT M+MVFGEITTKA +DY+KI+R+  + IG+     G D   C VLV IEQQSPDIAQG+  H+ K  E++GAGDQG MFGYATDET E +PL+ +LA +L A + + R++ +  WLRPD KTQVT+EY +D GA+VP +V TV++S QH E +T +E+  ++ E +IK  IP KYLDE T+FH+ P
Sbjct:   13 SFLFTSESVGEGHPDKIADQVSDAVLDACLAEDPLSKVACETATKTGMIMVFGEITTKAHLDYQKIIRNAVKDIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKALEELGAGDQGIMFGYATDETPELLPLTLLLAHQLNANMAKARRDGSLPWLRPDTKTQVTIEYEHDGGAVVPKKVKTVVVSAQHSEDITTEELRKEILEKIIKTTIPAKYLDEDTVFHIQP 242          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK1_YEAST (S-adenosylmethionine synthetase 1 OS=Saccharomyces cerevisiae GN=SAM1 PE=1 SV=2)

HSP 1 Score: 285.804 bits (730), Expect = 1.898e-76
Identity = 140/232 (60.34%), Postives = 173/232 (74.57%), Query Frame = 1
Query:  106 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            TFLFTSESV EGHPDK+CDQ+SDA+LDACL +DP SKVACET  KT M+MVFGEITTKA++DY+KIVRDT + IG+     G D   C VLV IEQQSPDIAQGVH    K  EDIGAGDQG MFGYATDET E +PL+ +LA KL   + + R++ + +WLRPD KTQVTVEY +D+G  VP R+ TV++S QH + +T +++ A LK  +I+ VIP   LDE T + + P
Sbjct:    4 TFLFTSESVGEGHPDKICDQVSDAILDACLAEDPHSKVACETAAKTGMIMVFGEITTKAQLDYQKIVRDTIKKIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGVHEE--KDLEDIGAGDQGIMFGYATDETPEGLPLTILLAHKLNMAMADARRDGSLAWLRPDTKTQVTVEYKDDHGRWVPQRIDTVVVSAQHADEITTEDLRAQLKSEIIEKVIPRDMLDENTKYFIQP 233          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK2_YEAST (S-adenosylmethionine synthetase 2 OS=Saccharomyces cerevisiae GN=SAM2 PE=1 SV=3)

HSP 1 Score: 285.034 bits (728), Expect = 3.237e-76
Identity = 138/237 (58.23%), Postives = 177/237 (74.68%), Query Frame = 1
Query:   91 LDKMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            + K +TFLFTSESV EGHPDK+CDQ+SDA+LDACLEQDP SKVACET  KT M+MVFGEITTKA++DY++IVRDT + IG+     G D   C VLV IEQQSPDIAQG+  H+ K  ED+GAGDQG MFGYATDET E +PL+ +LA KL   + + R++ +  WLRPD KTQVTVEY +DNG  VP R+ TV+IS QH + ++  ++   L++ +++ VIP+  LDE T + + P
Sbjct:    1 MSKSKTFLFTSESVGEGHPDKICDQVSDAILDACLEQDPFSKVACETAAKTGMIMVFGEITTKARLDYQQIVRDTIKKIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKSLEDLGAGDQGIMFGYATDETPEGLPLTILLAHKLNMAMADARRDGSLPWLRPDTKTQVTVEYEDDNGRWVPKRIDTVVISAQHADEISTADLRTQLQKDIVEKVIPKDMLDENTKYFIQP 235          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK1_CAEEL (Probable S-adenosylmethionine synthetase 1 OS=Caenorhabditis elegans GN=sams-1 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 6.105e-75
Identity = 138/231 (59.74%), Postives = 172/231 (74.46%), Query Frame = 1
Query:  109 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            FLFTSESV+EGHPDK+CDQISDAVLDA L+QDP +KVACET TKT MVM+ GEIT+KA VDY+ +VR     IGF    +G D   C VLV +EQQSP+IA GVH    K  ED+GAGDQG MFGYATDET E MPL+ +L+ K+ A L ++R+N T  W+RPD K+QVT+EY + +GA +P+RVHTV++STQH   VT +++   +   VIK VIP   LDE T+FH+NP
Sbjct:    5 FLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKAVVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVH--VNKDGEDVGAGDQGIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYESRHGATIPLRVHTVVVSTQHSPDVTLEKLRETILADVIKKVIPASLLDESTVFHINP 233          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK4_CAEEL (Probable S-adenosylmethionine synthetase 4 OS=Caenorhabditis elegans GN=sams-4 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.041e-74
Identity = 138/231 (59.74%), Postives = 174/231 (75.32%), Query Frame = 1
Query:  109 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GVH    K  +D+GAGDQG MFGYATDET E MPL+ +L+ KL  +L E+R++    W+RPD KTQVT+EY ++ GA VP+RVHTV+ISTQH   ++ D++  +L E VIK VIP   +D+KTI+HLNP
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVH--VDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYHLNP 234          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK3_CAEEL (Probable S-adenosylmethionine synthetase 3 OS=Caenorhabditis elegans GN=sams-3 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 1.041e-74
Identity = 138/231 (59.74%), Postives = 174/231 (75.32%), Query Frame = 1
Query:  109 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GVH    K  +D+GAGDQG MFGYATDET E MPL+ +L+ KL  +L E+R++    W+RPD KTQVT+EY ++ GA VP+RVHTV+ISTQH   ++ D++  +L E VIK VIP   +D+KTI+HLNP
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVH--VDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYHLNP 234          
BLAST of DY258060 vs. ExPASy Swiss-Prot
Match: METK_LEIIN (S-adenosylmethionine synthetase OS=Leishmania infantum GN=METK PE=2 SV=2)

HSP 1 Score: 279.256 bits (713), Expect = 1.776e-74
Identity = 147/238 (61.76%), Postives = 173/238 (72.69%), Query Frame = 1
Query:  100 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYND----NGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 801
            + + LF+SE V EGHPDKLCDQ+SDAVLDACL  DP SKVACE+C KT MVMVFGEITTKA +DY+KIVR+T + IGF S D GLD + C VLV IEQQSPDI QG+ G+F    ED+GAGDQG MFGYATDET   MPL++ LA  L  + +E+R++ +  W RPD KTQVTVEY  D       + P RV  VLIS QHDE VTND+I+ DL E VIK VIP   LD +T + LNP
Sbjct:    3 VHSILFSSEHVTEGHPDKLCDQVSDAVLDACLAGDPFSKVACESCAKTGMVMVFGEITTKAVLDYQKIVRNTIKDIGFDSADKGLDYESCNVLVAIEQQSPDICQGL-GNFDS--EDLGAGDQGMMFGYATDETETLMPLTYELARGLAKKYSELRRSGSLEWARPDAKTQVTVEYDYDTREGKQVLTPKRVAVVLISAQHDEHVTNDKISVDLMEKVIKAVIPANMLDAETKYWLNP 237          
The following BLAST results are available for this feature:
BLAST of DY258060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SCHPO2.028e-7857.51S-adenosylmethionine synthetase OS=Schizosaccharom... [more]
METK_NEUCR7.705e-7859.48S-adenosylmethionine synthetase OS=Neurospora cras... [more]
METK1_BOVIN1.717e-7758.51S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_ASCIM2.242e-7759.48S-adenosylmethionine synthetase OS=Ascobolus immer... [more]
METK1_YEAST1.898e-7660.34S-adenosylmethionine synthetase 1 OS=Saccharomyces... [more]
METK2_YEAST3.237e-7658.23S-adenosylmethionine synthetase 2 OS=Saccharomyces... [more]
METK1_CAEEL6.105e-7559.74Probable S-adenosylmethionine synthetase 1 OS=Caen... [more]
METK4_CAEEL1.041e-7459.74Probable S-adenosylmethionine synthetase 4 OS=Caen... [more]
METK3_CAEEL1.041e-7459.74Probable S-adenosylmethionine synthetase 3 OS=Caen... [more]
METK_LEIIN1.776e-7461.76S-adenosylmethionine synthetase OS=Leishmania infa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DD07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258060 ID=DY258060; Name=DY258060; organism=Citrus clementina; type=EST; length=803bp
GGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGT
CTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGA
TGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGAC
AAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCA
GGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGG
TCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAG
ATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGG
TCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCC
CGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGAC
ATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGAC
CTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTC
GTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGAT
GGGAAGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCATGGT
CCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGACTG
TCACAAATGATGAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCT
GTCATCCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCC
ATC
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