DY258075

Overview
NameDY258075
Unique NameDY258075
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GHRA_ECO81 (Glyoxylate/hydroxypyruvate reductase A OS=Escherichia coli O81 (strain ED1a) GN=ghrA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14
Identity = 52/143 (36.36%), Postives = 79/143 (55.24%), Query Frame = 1
Query:   43 TVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKYYPSVFELA---SNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEE-LFGL*NVVLMPHVGSGT 459
            T+GI+G G +G  VA+  + +  P+  +S T K     + +    EL+   S C +L+   P T ET  IIN+++++ L     L+N+ RG  V E +LL+AL  G++ GA LDVF  EP  PE  L+    V + PHV + T
Sbjct:  138 TIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGLQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAIT 280          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GHRA_ECO5E (Glyoxylate/hydroxypyruvate reductase A OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=ghrA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14
Identity = 52/143 (36.36%), Postives = 79/143 (55.24%), Query Frame = 1
Query:   43 TVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKYYPSVFELA---SNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEE-LFGL*NVVLMPHVGSGT 459
            T+GI+G G +G  VA+  + +  P+  +S T K     + +    EL+   S C +L+   P T ET  IIN+++++ L     L+N+ RG  V E +LL+AL  G++ GA LDVF  EP  PE  L+    V + PHV + T
Sbjct:  138 TIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAGWEELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAIT 280          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GHRA_ECO57 (Glyoxylate/hydroxypyruvate reductase A OS=Escherichia coli O157:H7 GN=ghrA PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14
Identity = 52/143 (36.36%), Postives = 79/143 (55.24%), Query Frame = 1
Query:   43 TVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKYYPSVFELA---SNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEE-LFGL*NVVLMPHVGSGT 459
            T+GI+G G +G  VA+  + +  P+  +S T K     + +    EL+   S C +L+   P T ET  IIN+++++ L     L+N+ RG  V E +LL+AL  G++ GA LDVF  EP  PE  L+    V + PHV + T
Sbjct:  138 TIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAGWEELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAIT 280          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GHRA_ECO55 (Glyoxylate/hydroxypyruvate reductase A OS=Escherichia coli (strain 55989 / EAEC) GN=ghrA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14
Identity = 52/143 (36.36%), Postives = 79/143 (55.24%), Query Frame = 1
Query:   43 TVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKYYPSVFELA---SNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEE-LFGL*NVVLMPHVGSGT 459
            T+GI+G G +G  VA+  + +  P+  +S T K     + +    EL+   S C +L+   P T ET  IIN+++++ L     L+N+ RG  V E +LL+AL  G++ GA LDVF  EP  PE  L+    V + PHV + T
Sbjct:  138 TIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPENPLWQHPRVTITPHVAAIT 280          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GHRA_ECO45 (Glyoxylate/hydroxypyruvate reductase A OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=ghrA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14
Identity = 52/143 (36.36%), Postives = 79/143 (55.24%), Query Frame = 1
Query:   43 TVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKYYPSVFELA---SNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEE-LFGL*NVVLMPHVGSGT 459
            T+GI+G G +G  VA+  + +  P+  +S T K     + +    EL+   S C +L+   P T ET  IIN+++++ L     L+N+ RG  V E +LL+AL  G++ GA LDVF  EP  PE  L+    V + PHV + T
Sbjct:  138 TIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAIT 280          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GHRA_ECO27 (Glyoxylate/hydroxypyruvate reductase A OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=ghrA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14
Identity = 52/143 (36.36%), Postives = 79/143 (55.24%), Query Frame = 1
Query:   43 TVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKYYPSVFELA---SNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEE-LFGL*NVVLMPHVGSGT 459
            T+GI+G G +G  VA+  + +  P+  +S T K     + +    EL+   S C +L+   P T ET  IIN+++++ L     L+N+ RG  V E +LL+AL  G++ GA LDVF  EP  PE  L+    V + PHV + T
Sbjct:  138 TIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAIT 280          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: VANH_ENTFC (D-specific alpha-keto acid dehydrogenase OS=Enterococcus faecium GN=vanH PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.432e-14
Identity = 51/124 (41.13%), Postives = 67/124 (54.03%), Query Frame = 1
Query:   43 TVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKYYPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELF 414
            TVG++G G+IG AV +R   F C +  YS +   S++  Y P   EL  N  I+ +  P   +T  II+ E I  +     LIN GRGP V+  EL+ AL  G+L GA LDV E E    EE F
Sbjct:  148 TVGVVGTGQIGKAVIERLRGFGCKVLAYSRS--RSIEVNYVP-FDELLQNSDIVTLHVPLNTDTHYIISHEQIQRMKQGAFLINTGRGPLVDTYELVKALENGKLGGAALDVLEGE----EEFF 264          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: SERA_ARCFU (D-3-phosphoglycerate dehydrogenase OS=Archaeoglobus fulgidus GN=serA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.165e-14
Identity = 48/156 (30.77%), Postives = 81/156 (51.92%), Query Frame = 1
Query:   37 GKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKYYPSVFE---LASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEE-LFGL*NVVLMPHVGSGTVETRKTMADLV 492
            GKT G+IGLGR+G  VAKR +A    +  Y          +    + +   L ++  ++ V  P+T+ET  +I +   + +    +++N  RG  V+E  L  A+  G+++ A LDV+E EP  P+  L  L NVV  PH+ + T E +  +  ++
Sbjct:  139 GKTAGVIGLGRVGFEVAKRCKALEMNVLAYDPFVSKERAEQIGVKLVDFDTLLASSDVITVHVPRTKETIGLIGKGQFEKMKDGVIVVNAARGGIVDEAALYEAIKAGKVAAAALDVYEKEPPSPDNPLLKLDNVVTTPHIAASTREAQLNVGMII 294          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: CTBP2_XENLA (C-terminal-binding protein 2 OS=Xenopus laevis GN=ctbp2 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.165e-14
Identity = 56/163 (34.36%), Postives = 83/163 (50.92%), Query Frame = 1
Query:   25 ARFTGKTVGIIGLGRIGMAVAKRAEAFICPINYY----SIT*KPSLKYKYYPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEE--LFGL*NVVLMPHVG----SGTVETRKTMA 483
            AR  G+T+GIIGLGRIG AVA RA+AF   + +Y    +   + SL  +   ++ EL  +   + + C   E    +IN   I  +     L+N  RG  V+E+ L  AL +GR+ GA LDV E+EP    +  L    N++  PH        ++E R+  A
Sbjct:  173 ARIRGETLGIIGLGRIGQAVALRAKAFNFTVIFYDPYLADGVERSLGLQRMATLQELLMHSDCITLHCNLNEHNHHLINDFTIKQMRQGCFLVNTARGGLVDEKALAQALKDGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHTAWYSEHASIEAREEAA 335          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GHRA_ECO7I (Glyoxylate/hydroxypyruvate reductase A OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=ghrA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.440e-14
Identity = 51/143 (35.66%), Postives = 78/143 (54.55%), Query Frame = 1
Query:   43 TVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKYYPSVFELA---SNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEE-LFGL*NVVLMPHVGSGT 459
            T+GI+G G +G  VA+  + +  P+  +S T K     + +    EL+   S C +L+   P T  T  IIN+++++ L     L+N+ RG  V E +LL+AL  G++ GA LDVF  EP  PE  L+    V + PHV + T
Sbjct:  138 TIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPATVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAIT 280          
The following BLAST results are available for this feature:
BLAST of DY258075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
GHRA_ECO811.096e-1436.36Glyoxylate/hydroxypyruvate reductase A OS=Escheric... [more]
GHRA_ECO5E1.096e-1436.36Glyoxylate/hydroxypyruvate reductase A OS=Escheric... [more]
GHRA_ECO571.096e-1436.36Glyoxylate/hydroxypyruvate reductase A OS=Escheric... [more]
GHRA_ECO551.096e-1436.36Glyoxylate/hydroxypyruvate reductase A OS=Escheric... [more]
GHRA_ECO451.096e-1436.36Glyoxylate/hydroxypyruvate reductase A OS=Escheric... [more]
GHRA_ECO271.096e-1436.36Glyoxylate/hydroxypyruvate reductase A OS=Escheric... [more]
VANH_ENTFC1.432e-1441.13D-specific alpha-keto acid dehydrogenase OS=Entero... [more]
SERA_ARCFU4.165e-1430.77D-3-phosphoglycerate dehydrogenase OS=Archaeoglobu... [more]
CTBP2_XENLA4.165e-1434.36C-terminal-binding protein 2 OS=Xenopus laevis GN=... [more]
GHRA_ECO7I5.440e-1435.66Glyoxylate/hydroxypyruvate reductase A OS=Escheric... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DF03ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258075 ID=DY258075; Name=DY258075; organism=Citrus clementina; type=EST; length=754bp
AGGAAGGGGGATTATAAGCTGACCGCTAGGTTCACTGGAAAAACAGTTGG
CATTATTGGGCTAGGAAGAATTGGCATGGCAGTTGCTAAGAGAGCTGAAG
CATTTATCTGCCCAATCAACTACTACTCTATAACATAGAAACCAAGTTTG
AAATACAAATACTACCCGAGTGTATTTGAGTTGGCCTCGAACTGTCACAT
TCTGGTCGTTGCATGCCCACAAACGGAAGAGACCCGCCGTATCATTAATC
GGGAAGTCATTGATGCTTTGGGACCAAAAGGGGTTCTCATCAACGTTGGG
AGGGGTCCTCGCGTGGAGGAACGTGAACTGTTGTCGGCACTGGTTGAAGG
CCGTTTAAGCGGAGCTGGGCTCGATGTGTTTGAAAATGAGCCTCATGTAC
CTGAGGAGCTCTTTGGTCTATAAAATGTGGTCCTTATGCCCCATGTAGGA
AGTGGCACAGTGGAAACCCGCAAAACCATGGCTGACCTTGTACTTGGGAA
TTTGGAAGCTCATTTTCTGAACAAACCGCTGCTTACTCCAGTAGTTTGAT
TGTTTCATGAAAGATGCAAGTTTAAGACCGATTGACGGCTCCATCCTGCT
GCTGCTACTTAAGTATGTTTTATCTAAAGAACATTGTTTTAAGGCCCTGG
TACAATTTGTCCCGAAGCCTTAGCCAATTACTTTAAGATCTTCAGCAACA
TGTTTTAATTAAATTCTTAAATTGCAGCAGTTGCATATGATGTTGATTTG
ACAT
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