DY258075

Overview
NameDY258075
Unique NameDY258075
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: DHGY_CUCSA (Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-A PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.105e-14
Identity = 52/183 (28.42%), Postives = 91/183 (49.73%), Query Frame = 1
Query:   37 GKTVGIIGLGRIGMAVAKR-AEAFICPINYYSIT*KPSLK-------------------YKYYPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADL----VLGNLEAH 513
            G+TVG+IG GRIG A A+   E F   + Y+ +     L+                   ++   S+ E+     ++ +     + T  ++N+E + A+    +LIN  RGP ++E  L+  L +  +   GLDVFE+EP++   L  + N +++PH+ S +  TR+ MA L    VLG ++ +
Sbjct:  165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQSTRLEKFVTAYGEFLKANGEAPVTWRRASSMDEVLREADVISLHPVLDKTTFHLVNKESLKAMKKDAILINCSRGPVIDEAALVDHLRDNPMFRVGLDVFEDEPYMKPGLADMKNAIIVPHIASASKWTREGMATLAALNVLGKIKGY 347          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: Y1556_HAEIN (Putative 2-hydroxyacid dehydrogenase HI1556 OS=Haemophilus influenzae GN=HI1556 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.279e-14
Identity = 54/173 (31.21%), Postives = 81/173 (46.82%), Query Frame = 1
Query:   10 DYKLTARFTGKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKYYPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEE-------LFGL*NVVLMPHVGSGTVETRKTMADLVLGNLE 507
            DY +T    G T+G+ G G +G  V + A A    + Y         +  Y P   E+     I+ + CP TE T+ +IN E +  +     LIN GRGP ++E  L+ AL  G L GA LDV   EP  PE+          + N+++ PH+   +     T+   V+ N+E
Sbjct:  138 DYPITD-VRGSTLGVFGKGCLGTEVGRLANAVGMKVLYAEHKDATVCREGYTP-FDEVLKQADIVTLHCPLTETTKDLINAETLSKMKKGAFLINTGRGPLIDELALVDALKTGHLGGAALDVMVKEP--PEKDNPLILAAKTMPNLIITPHIAWASDSAVTTLVGKVMQNIE 306          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: CTBP1_RAT (C-terminal-binding protein 1 OS=Rattus norvegicus GN=Ctbp1 PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 9.279e-14
Identity = 54/163 (33.13%), Postives = 83/163 (50.92%), Query Frame = 1
Query:   25 ARFTGKTVGIIGLGRIGMAVAKRAEAFICPINYY----SIT*KPSLKYKYYPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEE--LFGL*NVVLMPHVG----SGTVETRKTMA 483
            AR  G+T+GIIGLGR+G AVA RA+AF   + +Y    S   + +L  +   ++ +L  +   + + C   E    +IN   +  +     L+N  RG  V+E+ L  AL EGR+ GA LDV E+EP    +  L    N++  PH        ++E R+  A
Sbjct:  159 ARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGIERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAA 321          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: CTBP1_MOUSE (C-terminal-binding protein 1 OS=Mus musculus GN=Ctbp1 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 9.279e-14
Identity = 54/163 (33.13%), Postives = 83/163 (50.92%), Query Frame = 1
Query:   25 ARFTGKTVGIIGLGRIGMAVAKRAEAFICPINYY----SIT*KPSLKYKYYPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEE--LFGL*NVVLMPHVG----SGTVETRKTMA 483
            AR  G+T+GIIGLGR+G AVA RA+AF   + +Y    S   + +L  +   ++ +L  +   + + C   E    +IN   +  +     L+N  RG  V+E+ L  AL EGR+ GA LDV E+EP    +  L    N++  PH        ++E R+  A
Sbjct:  170 ARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGIERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAA 332          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: CTBP1_HUMAN (C-terminal-binding protein 1 OS=Homo sapiens GN=CTBP1 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 9.279e-14
Identity = 54/163 (33.13%), Postives = 83/163 (50.92%), Query Frame = 1
Query:   25 ARFTGKTVGIIGLGRIGMAVAKRAEAFICPINYY----SIT*KPSLKYKYYPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEE--LFGL*NVVLMPHVG----SGTVETRKTMA 483
            AR  G+T+GIIGLGR+G AVA RA+AF   + +Y    S   + +L  +   ++ +L  +   + + C   E    +IN   +  +     L+N  RG  V+E+ L  AL EGR+ GA LDV E+EP    +  L    N++  PH        ++E R+  A
Sbjct:  170 ARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAA 332          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: YPRB2_CORML (Uncharacterized protein in proB 3'region OS=Corynebacterium melassecola PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.583e-13
Identity = 51/173 (29.48%), Postives = 86/173 (49.71%), Query Frame = 1
Query:   40 KTVGIIGLGRIGMAVAKRAEAF---ICPINYYSIT*KPSLKYKYYPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEE--LFGL*NVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLTPV 543
            KTV I+G G IG+ + +  + F      +N      + + +         + +   + V+  P T+ T +I+N E +  + P  VL+NVGRGP +   +L+ AL  G ++GA LDV + EP +P+   L+ + NVV+ PH  +     R    +L L N+E     + + T V
Sbjct:  127 KTVAILGAGGIGVRLLEMLKPFNVKTIAVNNSGRPVEGADETFAMDKAEHVWAEADVFVLILPLTDATYQIVNAETLGKMKPSAVLVNVGRGPLINTDDLVDALNNGTIAGAALDVTDPEP-LPDSHPLWEMDNVVITPHTANTNERIRALTGELTLRNIELFEAGEQMATEV 298          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: YGT5_YEAST (Putative 2-hydroxyacid dehydrogenase YGL185C OS=Saccharomyces cerevisiae GN=YGL185C PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.583e-13
Identity = 49/162 (30.25%), Postives = 84/162 (51.85%), Query Frame = 1
Query:   37 GKTVGIIGLGRIGMAVAKRAEAFICPINYY-----SIT*KPSLKYKYY---PSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVV-LMPHVGSGTVETRKTMADLVL 495
            GK   I+GLG IG  VA + +  +    +Y       T   +  +K++    +++      H +VV  P T +T  +INR+ ++   P  +L+N+GRG  ++ R +  ALV GR++  GLDVF  EP + E++     +  + PH+GS T +  +   +L L
Sbjct:  197 GKKCLILGLGSIGKQVAYKLQYGLGMEIHYCKRSEDCTMSQNESWKFHLLDETIYAKLYQFHAIVVTLPGTPQTEHLINRKFLEHCNPGLILVNLGRGKILDLRAVSDALVTGRINHLGLDVFNKEPEIDEKIRSSDRLTSITPHLGSATKDVFEQSCELAL 358          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: LDHD_STRP1 (D-lactate dehydrogenase OS=Streptococcus pyogenes serotype M1 GN=ldhD PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.067e-13
Identity = 46/128 (35.94%), Postives = 69/128 (53.91%), Query Frame = 1
Query:   43 TVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLK--YKYYPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENE-PHVPEELFG 417
            TV IIG GRIG+A AK  + F C +  Y I    + K    Y  SV E   +  ++ +  P T E   + N ++  +     +L+N+ RG  +E ++LL AL  G LSGAG+D +E E P++P+   G
Sbjct:  147 TVAIIGTGRIGLATAKIFKGFGCKVVGYDIYQSDAAKAVLDYKESVEEAIKDADLVSLHMPPTAENTHLFNSDLFKSFKKGAILMNMARGAVIETQDLLDALDAGLLSGAGIDTYEFEGPYIPKNFEG 274          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: CTBP1_XENLA (C-terminal-binding protein 1 OS=Xenopus laevis GN=ctbp1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.067e-13
Identity = 54/163 (33.13%), Postives = 81/163 (49.69%), Query Frame = 1
Query:   25 ARFTGKTVGIIGLGRIGMAVAKRAEAFICPINYY----SIT*KPSLKYKYYPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEP--HVPEELFGL*NVVLMPHVG----SGTVETRKTMA 483
            AR  G+T+GIIGLGR+G AVA RA+ F   + +Y    S   + +L  +   ++ +L  +   + + C   E    +IN   I  +     L+N  RG  V+E+ L  AL EGR+ GA LDV E+EP       L    N++  PH        ++E R+  A
Sbjct:  170 ARIRGETLGIIGLGRVGQAVALRAKTFGFNVFFYDPYLSDGIERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTIKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFTQGPLKDAPNLICTPHAAWYSEQASIEMREEAA 332          
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: LDHD_STRA5 (D-lactate dehydrogenase OS=Streptococcus agalactiae serotype V GN=ldhD PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.700e-13
Identity = 46/128 (35.94%), Postives = 67/128 (52.34%), Query Frame = 1
Query:   43 TVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLK--YKYYPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENE-PHVPEELFG 417
            TV IIG GRIG+A AK  + F C +  Y I   P      +Y  SV E      ++ +  P T E   + N ++        +L+N+ RG  VE ++LL AL +G L GAG+D +E E P++P+   G
Sbjct:  147 TVAIIGTGRIGLATAKIFKGFGCRVIGYDIYHNPMADGILEYVNSVEEAVEEADLVSLHMPPTAENTHLFNLDMFKQFKKGAILMNMARGALVETKDLLEALDQGLLEGAGIDTYEFEGPYIPKNCQG 274          
The following BLAST results are available for this feature:
BLAST of DY258075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
DHGY_CUCSA7.105e-1428.42Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-... [more]
Y1556_HAEIN9.279e-1431.21Putative 2-hydroxyacid dehydrogenase HI1556 OS=Hae... [more]
CTBP1_RAT9.279e-1433.13C-terminal-binding protein 1 OS=Rattus norvegicus ... [more]
CTBP1_MOUSE9.279e-1433.13C-terminal-binding protein 1 OS=Mus musculus GN=Ct... [more]
CTBP1_HUMAN9.279e-1433.13C-terminal-binding protein 1 OS=Homo sapiens GN=CT... [more]
YPRB2_CORML1.583e-1329.48Uncharacterized protein in proB 3'region OS=Coryne... [more]
YGT5_YEAST1.583e-1330.25Putative 2-hydroxyacid dehydrogenase YGL185C OS=Sa... [more]
LDHD_STRP12.067e-1335.94D-lactate dehydrogenase OS=Streptococcus pyogenes ... [more]
CTBP1_XENLA2.067e-1333.13C-terminal-binding protein 1 OS=Xenopus laevis GN=... [more]
LDHD_STRA52.700e-1335.94D-lactate dehydrogenase OS=Streptococcus agalactia... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DF03ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258075 ID=DY258075; Name=DY258075; organism=Citrus clementina; type=EST; length=754bp
AGGAAGGGGGATTATAAGCTGACCGCTAGGTTCACTGGAAAAACAGTTGG
CATTATTGGGCTAGGAAGAATTGGCATGGCAGTTGCTAAGAGAGCTGAAG
CATTTATCTGCCCAATCAACTACTACTCTATAACATAGAAACCAAGTTTG
AAATACAAATACTACCCGAGTGTATTTGAGTTGGCCTCGAACTGTCACAT
TCTGGTCGTTGCATGCCCACAAACGGAAGAGACCCGCCGTATCATTAATC
GGGAAGTCATTGATGCTTTGGGACCAAAAGGGGTTCTCATCAACGTTGGG
AGGGGTCCTCGCGTGGAGGAACGTGAACTGTTGTCGGCACTGGTTGAAGG
CCGTTTAAGCGGAGCTGGGCTCGATGTGTTTGAAAATGAGCCTCATGTAC
CTGAGGAGCTCTTTGGTCTATAAAATGTGGTCCTTATGCCCCATGTAGGA
AGTGGCACAGTGGAAACCCGCAAAACCATGGCTGACCTTGTACTTGGGAA
TTTGGAAGCTCATTTTCTGAACAAACCGCTGCTTACTCCAGTAGTTTGAT
TGTTTCATGAAAGATGCAAGTTTAAGACCGATTGACGGCTCCATCCTGCT
GCTGCTACTTAAGTATGTTTTATCTAAAGAACATTGTTTTAAGGCCCTGG
TACAATTTGTCCCGAAGCCTTAGCCAATTACTTTAAGATCTTCAGCAACA
TGTTTTAATTAAATTCTTAAATTGCAGCAGTTGCATATGATGTTGATTTG
ACAT
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