DY258075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GHRB_SHIF8 (Glyoxylate/hydroxypyruvate reductase B OS=Shigella flexneri serotype 5b (strain 8401) GN=ghrB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.694e-21 Identity = 63/160 (39.38%), Postives = 88/160 (55.00%), Query Frame = 1 Query: 40 KTVGIIGLGRIGMAVAKRAE-AFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEP-HVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNL 504 KT+GI+G+GRIGMA+A+RA F PI Y + + ++ Y + L + + P T+ET + E + + IN GRGP V+E L++AL +G + AGLDVFE EP V L + NVV +PH+GS T ETR MA + NL Sbjct: 146 KTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHVAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNL 305
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GHRB_SHIFL (Glyoxylate/hydroxypyruvate reductase B OS=Shigella flexneri GN=ghrB PE=3 SV=4) HSP 1 Score: 102.064 bits (253), Expect = 3.518e-21 Identity = 62/160 (38.75%), Postives = 87/160 (54.37%), Query Frame = 1 Query: 40 KTVGIIGLGRIGMAVAKRAE-AFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEP-HVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNL 504 KT+GI+G+GRIGMA+A+R F PI Y + + ++ Y + L + + P T+ET + E + + IN GRGP V+E L++AL +G + AGLDVFE EP V L + NVV +PH+GS T ETR MA + NL Sbjct: 146 KTLGIVGMGRIGMALAQRVHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNL 305
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: YN14_YEAST (Putative 2-hydroxyacid dehydrogenase YNL274C OS=Saccharomyces cerevisiae GN=YNL274C PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.595e-21 Identity = 65/178 (36.52%), Postives = 97/178 (54.49%), Query Frame = 1 Query: 37 GKTVGIIGLGRIGMAVAKRAEAF-ICPINYYSIT*KPSLKYK--YYPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLTPVV*LFHE 561 GKTVGI+GLGRIG + +R + F Y++ PS + Y E I+ V P T +IN E I+ + V++N RG ++E+ + AL G++ AGLDVFE EP + +EL + V+ +PH+G+ +VETRK M +LV+ N + L +LT V L +E Sbjct: 163 GKTVGILGLGRIGRCILERLKPFGFENFIYHNRHQLPSEEEHGCEYVGFEEFLKRSDIVSVNVPLNHNTHHLINAETIEKMKDGVVIVNTARGAVIDEQAMTDALRSGKIRSAGLDVFEYEPKISKELLSMSQVLGLPHMGTHSVETRKKMEELVVENAKNVILTGKVLTIVPELQNE 340
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: Y606_STAS1 (Putative 2-hydroxyacid dehydrogenase SSP0606 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0606 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.595e-21 Identity = 60/156 (38.46%), Postives = 85/156 (54.49%), Query Frame = 1 Query: 34 TGKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLV 492 +GKT+GIIGLG IG AVA+RA+AF I Y K + + Y + L N + + I++ + + P LIN RGP V E+ L+ AL + + GA LDVFE EP + +EL L NVV+ PH+G+ T E+R M+ +V Sbjct: 145 SGKTIGIIGLGEIGSAVARRAKAFDMNILYTGPHQKVDKEREIGAKYVDLETLLKNADFVTINAAYNPSLHHQIDKAQFEMMKPTSYLINASRGPIVHEKALVQALKDKEIEGAALDVFEFEPEINDELKTLDNVVITPHIGNATFESRDMMSKIV 300
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: GHRB_SALG2 (Glyoxylate/hydroxypyruvate reductase B OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=ghrB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.595e-21 Identity = 61/160 (38.12%), Postives = 85/160 (53.12%), Query Frame = 1 Query: 40 KTVGIIGLGRIGMAVAKRAE-AFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEP-HVPEELFGL*NVVLMPHVGSGTVETRKTMADLVLGNL 504 KT+GI+G+GRIGMA+A+RA F P+ Y++ + ++ Y + L + V P T ETR + + + IN GRGP +E L++AL G + AGLDVFE EP V L + NVV +PH+GS T ETR M + NL Sbjct: 146 KTLGIVGMGRIGMALAQRAHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFINAGRGPVADENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSNVVAVPHIGSATHETRYNMMACAVDNL 305
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: Y2577_STAA8 (Putative 2-hydroxyacid dehydrogenase SAOUHSC_02577 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02577 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21 Identity = 58/156 (37.18%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 34 TGKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLV 492 +GKT+GIIGLG IG AVA+RA AF + Y K + + Y + L N + + + +I+ E + LIN RGP V E+ L+ AL + + GA LDV+E EP + ++L L NVVL PH+G+ T E R M+ +V Sbjct: 144 SGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTAYLINASRGPIVHEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLNNVVLTPHIGNATFEARDMMSKIV 299
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: Y2296_STAAC (Putative 2-hydroxyacid dehydrogenase SACOL2296 OS=Staphylococcus aureus (strain COL) GN=SACOL2296 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21 Identity = 58/156 (37.18%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 34 TGKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLV 492 +GKT+GIIGLG IG AVA+RA AF + Y K + + Y + L N + + + +I+ E + LIN RGP V E+ L+ AL + + GA LDV+E EP + ++L L NVVL PH+G+ T E R M+ +V Sbjct: 144 SGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTAYLINASRGPIVHEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLNNVVLTPHIGNATFEARDMMSKIV 299
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: Y2254_STAA3 (Putative 2-hydroxyacid dehydrogenase SAUSA300_2254 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2254 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21 Identity = 58/156 (37.18%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 34 TGKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLV 492 +GKT+GIIGLG IG AVA+RA AF + Y K + + Y + L N + + + +I+ E + LIN RGP V E+ L+ AL + + GA LDV+E EP + ++L L NVVL PH+G+ T E R M+ +V Sbjct: 144 SGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTAYLINASRGPIVHEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLNNVVLTPHIGNATFEARDMMSKIV 299
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: Y2224_STAAW (Putative 2-hydroxyacid dehydrogenase MW2224 OS=Staphylococcus aureus (strain MW2) GN=MW2224 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21 Identity = 58/156 (37.18%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 34 TGKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLV 492 +GKT+GIIGLG IG AVA+RA AF + Y K + + Y + L N + + + +I+ E + LIN RGP V E+ L+ AL + + GA LDV+E EP + ++L L NVVL PH+G+ T E R M+ +V Sbjct: 144 SGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTAYLINASRGPIVHEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLNNVVLTPHIGNATFEARDMMSKIV 299
BLAST of DY258075 vs. ExPASy Swiss-Prot
Match: Y2196_STAAS (Putative 2-hydroxyacid dehydrogenase SAS2196 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2196 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21 Identity = 58/156 (37.18%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 34 TGKTVGIIGLGRIGMAVAKRAEAFICPINYYSIT*KPSLKYKY---YPSVFELASNCHILVVACPQTEETRRIINREVIDALGPKGVLINVGRGPRVEERELLSALVEGRLSGAGLDVFENEPHVPEELFGL*NVVLMPHVGSGTVETRKTMADLV 492 +GKT+GIIGLG IG AVA+RA AF + Y K + + Y + L N + + + +I+ E + LIN RGP V E+ L+ AL + + GA LDV+E EP + ++L L NVVL PH+G+ T E R M+ +V Sbjct: 144 SGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTAYLINASRGPIVHEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLNNVVLTPHIGNATFEARDMMSKIV 299 The following BLAST results are available for this feature:
BLAST of DY258075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258075 ID=DY258075; Name=DY258075; organism=Citrus clementina; type=EST; length=754bpback to top |