DY258096
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS2_PIG (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Sus scrofa GN=HMGCS2 PE=2 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 8.871e-81 Identity = 148/263 (56.27%), Postives = 186/263 (70.72%), Query Frame = 1 Query: 220 TMAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCNK----YQETGRETNFSFQRLINFWSIPPYNRLGQKN 996 T K+VGILA+++YFP V Q LE D G+YT+GLGQ M FCS ED+ S+ LT V L+E+ ++ +G LEVG+ET+IDKSKS+KT LM++F+ GNTDIEG+D+TNACYGGTA+LFN NWVESS+WDGRY +VVC D AVY G +RPTGGA AV MLVGP+AP+A E LRG+HM +AYDFYKPN SEYP+VDGKLS CYL ALD CY K +++ G E +F+ L P+ +L QK+ Sbjct: 49 TWPKDVGILALEVYFPAQYVDQTDLEKFDNVEAGRYTVGLGQTHMGFCSVQEDINSLCLTVVQRLMERTQLPWDSVGWLEVGTETIIDKSKSVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWVESSAWDGRYAVVVCGDIAVYPRGNSRPTGGAGAVAMLVGPEAPLALERGLRGTHMENAYDFYKPNATSEYPLVDGKLSIQCYLRALDRCYTLYRQKIEKQWKQAGIERHFTLDDLQFMIFHTPFCKLVQKS 311 HSP 2 Score: 21.557 bits (44), Expect = 8.871e-81 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 983 LDKKTLARLVFKDF 1024 L +K+LARL+F DF Sbjct: 307 LVQKSLARLMFSDF 320
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS2_RAT (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus GN=Hmgcs2 PE=2 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 1.157e-80 Identity = 146/263 (55.51%), Postives = 186/263 (70.72%), Query Frame = 1 Query: 220 TMAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCNKYQETGRETNFSFQRLINFWSIPPYNRLGQKN 996 T K+VGILA+++YFP V Q LE + GKYT+GLGQ M FCS ED+ S+ LT V L+E+ K+ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TNACYGGTA+LFN NW+ESS WDGRY LVVC D AVY G RPTGGA AV ML+GP AP+ E LRG+HM +AYDFYKPNLASEYP+VDGKLS CYL ALD CY + + N++++ G F+ + P+ ++ QK+ Sbjct: 49 TWPKDVGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERTKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSYWDGRYALVVCGDIAVYPSGNPRPTGGAGAVAMLIGPKAPLVLEQGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRRKIQNQWKQAGNNQPFTLDDVQYMIFHTPFCKMVQKS 311 HSP 2 Score: 21.1718 bits (43), Expect = 1.157e-80 Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 989 KKTLARLVFKDF 1024 +K+LARL+F DF Sbjct: 309 QKSLARLMFNDF 320
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCSB_DICDI (Hydroxymethylglutaryl-CoA synthase B OS=Dictyostelium discoideum GN=hgsB PE=3 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 5.704e-80 Identity = 142/257 (55.25%), Postives = 185/257 (71.98%), Query Frame = 1 Query: 229 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCNKYQETGRETNFSFQRLINFWSIPPYNRLGQKNF 999 K++GI A+DIYFP T V Q L+ +D S GKYTIGLGQ M+F + ED++SM++T+V ++ KY ID + IGRLEVG+ET+IDKSKS+K+ +M +F+++GNT +EGVD+ NACYGGT ALFN + W+ESS WDGRY LVV D AVY++G ARPTGGA V ML+GP+A + F+ LRG+HM + DFYKP+L+SEYP VDGKLS CYL ALD CY K++ + FS PYNRL QK++ Sbjct: 5 KDIGICAIDIYFPQTYVNQSELKKYDKVSNGKYTIGLGQTNMSFVGDREDIVSMAMTSVKMMMSKYSIDYQSIGRLEVGTETIIDKSKSVKSSIMSLFQEYGNTSLEGVDTLNACYGGTNALFNSLQWIESSYWDGRYALVVTGDIAVYSKGAARPTGGAGVVTMLIGPNATLIFDQSLRGTHMENVNDFYKPDLSSEYPYVDGKLSIECYLRALDKCYLEYKKKFESINDDNKFSMDSFDYVCFHSPYNRLVQKSY 261
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS1_BLAGE (Hydroxymethylglutaryl-CoA synthase 1 OS=Blattella germanica GN=HMGCS-1 PE=2 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 7.449e-80 Identity = 150/255 (58.82%), Postives = 188/255 (73.73%), Query Frame = 1 Query: 232 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCNKYQETGRETNFSFQRLINFWSIPPYNRLGQKN 996 +VGI+A+++ FP V Q LE +D S GKYT+GLGQ M FC++ ED+ S+ LT V+ L+E++ I QIGRLEVG+ET++DKSKS+KT LMQ+F+ NTDIEGVD+ NACYGGT+ALFN ++WVESSSWDGRY LVV D AVYA+G ARPTGGA AV MLVG +AP+ F+ +R SHM HAYDFYKP+L+S YP VDGKLS CYL ALD CY+ C+K Q+ E F +RL PY +L QK+ Sbjct: 5 DVGIVALELIFPSQYVDQVDLEVYDNVSAGKYTVGLGQARMGFCTDREDINSLCLTVVSRLMERWSIPYSQIGRLEVGTETLLDKSKSVKTVLMQLFKD--NTDIEGVDTVNACYGGTSALFNAISWVESSSWDGRYALVVAGDIAVYAKGSARPTGGAGAVAMLVGANAPLVFDRGVRSSHMQHAYDFYKPDLSSLYPTVDGKLSIQCYLSALDHCYQLYCSKIQKQLGE-KFDIERLDAVLFHAPYCKLVQKS 256
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS2_BOVIN (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Bos taurus GN=HMGCS2 PE=2 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 1.649e-79 Identity = 146/263 (55.51%), Postives = 185/263 (70.34%), Query Frame = 1 Query: 220 TMAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCNK----YQETGRETNFSFQRLINFWSIPPYNRLGQKN 996 T K+VGILAM++YFP V Q LE + G+YT+GLGQ M FCS EDV S+ LT V L+E+ ++ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TNACYGGTA+LFN NW+ESSSWDGRY LVVC D AVY G ARPTGGA AV MLVGP+AP+ E LRG+HM + YDFYKP++ SEYP+VDGKLS CYL ALD CY K +++ G + F+ + P+ +L QK+ Sbjct: 49 TWPKDVGILAMEVYFPAQYVDQTELEKFNKVEAGRYTVGLGQTQMGFCSVQEDVNSLCLTVVQQLMERTQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYALVVCGDIAVYPSGNARPTGGAGAVAMLVGPEAPLVLERGLRGTHMENVYDFYKPDVTSEYPLVDGKLSIQCYLRALDKCYAFYRQKIEKQWKQAGIDRPFTLDDVQYMIFHTPFCKLVQKS 311 HSP 2 Score: 21.557 bits (44), Expect = 1.649e-79 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 983 LDKKTLARLVFKDF 1024 L +K+LARL+F DF Sbjct: 307 LVQKSLARLMFNDF 320
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS_YEAST (Hydroxymethylglutaryl-CoA synthase OS=Saccharomyces cerevisiae GN=ERG13 PE=1 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 3.239e-75 Identity = 139/254 (54.72%), Postives = 178/254 (70.08%), Query Frame = 1 Query: 217 KTMAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCNKYQETGRETNFSFQRLINFWSIPPYN 978 KT +NVGI + IY P CV Q LE DG S+GKYTIGLGQ M+F ++ ED+ SMSLT ++ L++ Y ID +IGRLEVG+ET+IDKSKS+K+ LMQ+F + NTD+EG+D+ NACYGGT ALFN +NW+ES++WDGR +VVC D A+Y +G ARPTGGA V M +GPDAP+ F+S +R S+M HAYDFYKP+ SEYP VDG S TCY+ ALD YK K G ++ + +N YN Sbjct: 43 KTRPQNVGIKGIQIYIPTQCVNQSELEKFDGVSQGKYTIGLGQTNMSFVNDREDIYSMSLTVLSKLIKSYNIDTNKIGRLEVGTETLIDKSKSVKSVLMQLFGE--NTDVEGIDTLNACYGGTNALFNSLNWIESNAWDGRDAIVVCGDIAIYDKGAARPTGGAGTVAMWIGPDAPIVFDS-VRASYMEHAYDFYKPDFTSEYPYVDGHFSLTCYVKALDQVYKSYSKKAISKGLVSDPAGSDALNVLKYFDYN 293
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS2_BLAGE (Hydroxymethylglutaryl-CoA synthase 2 OS=Blattella germanica GN=HMGCS-2 PE=2 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 1.777e-73 Identity = 139/261 (53.26%), Postives = 182/261 (69.73%), Query Frame = 1 Query: 229 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCNKYQE----TGRE-TNFSFQRLINFWSIPPYNRLGQKN 996 ++VGI+ +++ FP V Q LE +D S GKYT+GLGQ+ M C++ ED+ S+ LTAV L+E+ ID IG LEVG+ET++DK KS+KT LMQ+FE+ GNTD+EG+D+ NACY GTAALFN + W+ESSSWDGRY +VV D A+YA+ PTGGA A++ML+G +AP+ + +R SHM HAYDFYKP+L SEYPVVDGKLS CYL ALD CY C+K ++ G+E T F PY +L QK+ Sbjct: 6 EDVGIIGIEMIFPSLYVDQAELETYDEVSPGKYTMGLGQDKMGVCTDREDINSLCLTAVDKLMERNNIDYNDIGWLEVGTETILDKVKSVKTVLMQLFEESGNTDVEGIDTINACYRGTAALFNALIWIESSSWDGRYAIVVAADIAIYAK-ECSPTGGAGALLMLIGANAPIVIDRGVRASHMKHAYDFYKPDLMSEYPVVDGKLSVQCYLSALDHCYPRFCSKTEKYLKRCGKENTKIDLDYFDAFVFHSPYCKLVQKS 265
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS_SCHPO (Hydroxymethylglutaryl-CoA synthase OS=Schizosaccharomyces pombe GN=hcs1 PE=1 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 2.837e-71 Identity = 129/219 (58.90%), Postives = 165/219 (75.34%), Query Frame = 1 Query: 229 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY 885 K++GI + +Y P V+Q ALEAHDG S GKYTIGLG MAF + ED+ S LTA++ L+++Y+ID +IGRLEVG+ET+IDKSKS+K+ LMQ+F N ++EG+D NACYGG ALFN ++W+ESS+WDGR G+VV D A+YA+G ARPTGGA V +LVGP+AP+ FE LRG++M HAYDFYKP+L SEYP VDG S CY+ ALD Y Sbjct: 6 KDIGIKGLVLYTPNQYVEQAALEAHDGVSTGKYTIGLGLTKMAFVDDREDIYSFGLTALSQLIKRYQIDISKIGRLEVGTETIIDKSKSVKSVLMQLFGD--NHNVEGIDCVNACYGGVNALFNTIDWIESSAWDGRDGIVVAGDIALYAKGNARPTGGAGCVALLVGPNAPIVFEPGLRGTYMQHAYDFYKPDLTSEYPYVDGHFSLECYVKALDGAY 222
BLAST of DY258096 vs. ExPASy Swiss-Prot
Match: HMCS_CAEEL (Hydroxymethylglutaryl-CoA synthase OS=Caenorhabditis elegans GN=F25B4.6 PE=2 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 8.293e-55 Identity = 113/231 (48.92%), Postives = 149/231 (64.50%), Query Frame = 1 Query: 220 TMAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVE-SSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKP--NLASEYPVVDGKLSQTCYLMALDTCYKCLCNK 903 T +VGI A+++YFP V Q LE + S GKYTIGLGQ+ M FCS+ ED++S+SLT L+E YKI IG L VG+ET+IDKSKS+KT LM +F GN+DIEGVD NAC+GG AL + ++WV + D + +VV D A+Y EGPAR TGGA A+ L+ PDA + + + HM + +DF+KP + SEYPVVDG LS + YL A+ Y +K Sbjct: 9 TPVTDVGIGAIELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNEDIVSISLTVTRKLIETYKISTDSIGCLVVGTETMIDKSKSVKTALMDLFP--GNSDIEGVDIKNACFGGAQALLHAIDWVTVNHPLDKKNAIVVVADIAIYEEGPARCTGGAGAIAFLICPDASIPIDRQFSACHMKNTWDFFKPITPIPSEYPVVDGSLSLSSYLEAVRMTYTYFISK 237 The following BLAST results are available for this feature:
BLAST of DY258096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258096 ID=DY258096; Name=DY258096; organism=Citrus clementina; type=EST; length=1301bpback to top |