DY258098

Overview
NameDY258098
Unique NameDY258098
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1343
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1044 contig Ccv1_Contig1044:1..1343. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: CTBP2_BOVIN (C-terminal-binding protein 2 OS=Bos taurus GN=CTBP2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.072e-12
Identity = 58/225 (25.78%), Postives = 108/225 (48.00%), Query Frame = 1
Query:  268 TMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPG---DVTGNAASCAELTIYL----MLGLLRKQNEMRMAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHL 921
            T+ L    + +   +++I++ G G + VDI AA   GI V  IP    + T ++  C  L +Y     +   LR+   ++ ++EQ +        + G+T+ ++GFG  G  +A R + FG  ++     +  + Q   + S    +   + DL+ +  C            V + C +LN+    ++N   +  M++G+ LVN ARGGL+D +A+A  L+ G +
Sbjct:   84 TITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTICHILNLYRRNTWLYQALREGTRVQ-SVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSVLF----YDPYLQDGTERSLGVQRVYTLQDLLYQSDC------------VSLHC-NLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRI 290          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: LDHD_ECOLI (D-lactate dehydrogenase OS=Escherichia coli (strain K12) GN=ldhA PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.828e-12
Identity = 55/201 (27.36%), Postives = 96/201 (47.76%), Query Frame = 1
Query:  337 GLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVP--TGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGRLG 933
            G   VD++AA   G+KV R+P     +  + AE  I +M+ L R+ +            +   TG T+ GKT  ++G G IGV + + L+ FG++++A               SA A++ G+          + D+    S +DV+     L  +   ++N++    MK G ++VN +RG L+D +A    L++  +G LG
Sbjct:   78 GFNNVDLDAAKELGLKVVRVPAY---DPEAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAMLRILKGFGMRLLA----------FDPYPSAAALELGVE---------YVDLPTLFSESDVISLHCPLTPENYHLLNEAAFEQMKNGVMIVNTSRGALIDSQAAIEALKNQKIGSLG 256          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: FDH2_YEAST (Formate dehydrogenase 2 OS=Saccharomyces cerevisiae GN=FDH2 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.118e-12
Identity = 69/228 (30.26%), Postives = 105/228 (46.05%), Query Frame = 1
Query:  277 LDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQN---EMRMAIEQKKLGVPTGE-TLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQS-----SALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGRLG 933
            +  N I+ A  +KL +  GVG + VD+ AA    I V  + G    N  S AE  +  +L L+R  N   +  +  E    GV   E  L  K +  +G G IG  + +RL  F  K    K  +  + ++  ++      A  + NG   D+V      ED+    + +DVV     L+K + G+ NK  +S MK G+ LVN ARG +   E +A  ++SG L   G
Sbjct:   78 ISRNRIAEAPNLKLCVTAGVGSDHVDLEAANERKITVTEVTGS---NVVSVAEHVMATILVLIRNYNGGHQQAINGEWDIAGVAKNEYDLEDKIISTVGAGRIGYRVLERLVAFNPK----KLLYYDYQELPAEAINRLNEASKLFNGR-GDIVQRVEKLEDM---VAQSDVVTINCPLHKDSRGLFNKKLISHMKDGAYLVNTARGAICVAEDVAEAVKSGKLAGYG 294          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: FDH1_YEAST (Formate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=FDH1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.118e-12
Identity = 69/228 (30.26%), Postives = 105/228 (46.05%), Query Frame = 1
Query:  277 LDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQN---EMRMAIEQKKLGVPTGE-TLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQS-----SALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGRLG 933
            +  N I+ A  +KL +  GVG + VD+ AA    I V  + G    N  S AE  +  +L L+R  N   +  +  E    GV   E  L  K +  +G G IG  + +RL  F  K    K  +  + ++  ++      A  + NG   D+V      ED+    + +DVV     L+K + G+ NK  +S MK G+ LVN ARG +   E +A  ++SG L   G
Sbjct:   78 ISRNRIAEAPNLKLCVTAGVGSDHVDLEAANERKITVTEVTGS---NVVSVAEHVMATILVLIRNYNGGHQQAINGEWDIAGVAKNEYDLEDKIISTVGAGRIGYRVLERLVAFNPK----KLLYYDYQELPAEAINRLNEASKLFNGR-GDIVQRVEKLEDM---VAQSDVVTINCPLHKDSRGLFNKKLISHMKDGAYLVNTARGAICVAEDVAEAVKSGKLAGYG 294          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: VANH_ENTFC (D-specific alpha-keto acid dehydrogenase OS=Enterococcus faecium GN=vanH PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.072e-12
Identity = 59/207 (28.50%), Postives = 96/207 (46.38%), Query Frame = 1
Query:  310 MKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQK--KLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLG 924
            +K I    +G   +D  AA R GI V     +V  +  S A+ T+ L+L  +R    +  ++E+   +L    G+ L   TV ++G G IG  + +RLR FG K++A  RS            ++ V     D+L+               +D+V   + LN  T  I++   +  MK+G+ L+N  RG L+D   +   LE+G LG
Sbjct:   72 VKYISTRSIGCNHIDTTAAKRMGITV----DNVAYSPDSVADYTMMLILMAVRNVKSIVRSVEKHDFRLDSDRGKVLSDMTVGVVGTGQIGKAVIERLRGFGCKVLAYSRS-----------RSIEVNYVPFDELLQN-------------SDIVTLHVPLNTDTHYIISHEQIQRMKQGAFLINTGRGPLVDTYELVKALENGKLG 250          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: FDH_EMENI (Probable formate dehydrogenase OS=Emericella nidulans GN=aciA PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.072e-12
Identity = 66/239 (27.62%), Postives = 103/239 (43.10%), Query Frame = 1
Query:  277 LDSNVISRANQMKLIMQFGVGLEGVDINAA--TRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVPTGE-TLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMK-----------------KGSLLVNIARGGLLDYEAIAHYLESGHLGRLG 933
            L +  +++A  +KL +  G+G + VD++AA  T  GI VA + G    + A    +TI L++      ++     +     V   E  L  K V  +G G IG  + +RL+PF  K +          +V  +  A  V               + + +  S  DVV     L+++T G+ NK  +S MK                 KGS LVN ARG ++  E +A  L+SGHL   G
Sbjct:   70 LTAERLAKAKNLKLAVTAGIGSDHVDLDAANKTNGGITVAEVTGSNVVSVAEHVVMTILLLVRNFVPAHDQIRNGDWNVAAVAKNEFDLENKVVGTVGVGRIGERVLRRLKPFDCKELLYYDYQPLRPEVEKEIGARRV---------------DSLEEMVSQCDVVTINCPLHEKTRGLFNKELISKMKPGKSALLYLIIPMLMYHKGSWLVNTARGAIVVKEDVAEALKSGHLRGYG 293          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: LDHD_DICDI (Putative D-lactate dehydrogenase OS=Dictyostelium discoideum GN=ldhA PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 5.318e-12
Identity = 68/259 (26.25%), Postives = 118/259 (45.56%), Query Frame = 1
Query:  175 YLQNYPSIQVDVIPISDAPDVIANYHLCVVKTMRLDSNVIS--RANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVP--TGETLLGKTVFILGFGNIGVELAKRLR-PFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDL-VDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGRLG 933
            Y  NY +   D+  +++A    A   +C      L   VI    +N  K+I+    G   VD++ A + GI V R+P   + NA S  E  + L++ L RK ++    +      +    G  ++ K   I+G GNIG +L + L+  FG K+IA                   ++N  + D+ ++     ++I+K     DV+     LN QT  +VN   +  M+ G +++N++RG L++       L+SG +  LG
Sbjct:   24 YEINYVTSACDIKSVNEAKGSEA---VCCFVNDDLSKEVIETLHSNGTKVILMRCAGFNKVDLDTANKLGIPVLRVPA-YSPNAVS--EYALSLIMALNRKTHKAHDRVRDANFEINGMEGFNMVSKVYGIVGTGNIGEQLCRVLKLGFGAKVIAYD----------------IIENKAVTDIGIEYVKTLDEIWK---QCDVISLHTPLNSQTKYMVNSESIEKMRDGVMIINVSRGALVNASDAIVGLKSGKISSLG 257          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: CTBP2_XENLA (C-terminal-binding protein 2 OS=Xenopus laevis GN=ctbp2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 5.318e-12
Identity = 55/224 (24.55%), Postives = 102/224 (45.54%), Query Frame = 1
Query:  268 TMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPG---DVTGNAASCAELTIYLMLGLLR---KQNEMRMAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHL 921
            T+ L    + +   +++I++ G G + +DI +A   GI V  IP    + T ++  C  L +Y  +  L    ++     ++EQ +        + G+T+ I+G G IG  +A R + F   +I      A   + S     +A     + +L+    C            + + C +LN+    ++N   +  M++G  LVN ARGGL+D +A+A  L+ G +
Sbjct:   81 TITLSREDLEKFKALRIIIKIGSGYDNIDIKSAAELGIAVCNIPSASVEETADSTLCHILNLYRRVTWLHQAMREGNRPASVEQIREVAGGAARIRGETLGIIGLGRIGQAVALRAKAFNFTVIFYDPYLADGVERSLGLQRMAT----LQELLMHSDC------------ITLHC-NLNEHNHHLINDFTIKQMRQGCFLVNTARGGLVDEKALAQALKDGRI 287          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: CTBP1_XENLA (C-terminal-binding protein 1 OS=Xenopus laevis GN=ctbp1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.021e-11
Identity = 52/224 (23.21%), Postives = 101/224 (45.09%), Query Frame = 1
Query:  268 TMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPG---DVTGNAASCAELTIYLMLGLLR---KQNEMRMAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHL 921
            T+ L    + +   +++I++ G G + +DI +A   GI V  +P    + T ++  C  L +Y     L    ++     ++EQ +        + G+T+ I+G G +G  +A R + FG  +      +  +     + +    +   + DL+    C            V + C  LN+    ++N   +  M++G+ LVN ARGGL+D +A+A  L+ G +
Sbjct:   78 TITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTMCHILNLYRRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKTFGFNVF----FYDPYLSDGIERALGLQRVSTLQDLLFHSDC------------VTLHC-GLNEHNHHLINDFTIKQMRQGAFLVNTARGGLVDEKALAQALKEGRI 284          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: CTBP1_RAT (C-terminal-binding protein 1 OS=Rattus norvegicus GN=Ctbp1 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 2.021e-11
Identity = 52/224 (23.21%), Postives = 102/224 (45.54%), Query Frame = 1
Query:  268 TMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPG---DVTGNAASCAELTIYLMLGLLR---KQNEMRMAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHL 921
            T+ L    + +   +++I++ G G + +DI +A   GI V  +P    + T ++  C  L +Y     L    ++     ++EQ +        + G+T+ I+G G +G  +A R + FG  ++     +  +     + +    +   + DL+    C            V + C  LN+    ++N   +  M++G+ LVN ARGGL+D +A+A  L+ G +
Sbjct:   67 TITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVL----FYDPYLSDGIERALGLQRVSTLQDLLFHSDC------------VTLHC-GLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRI 273          
The following BLAST results are available for this feature:
BLAST of DY258098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CTBP2_BOVIN1.072e-1225.78C-terminal-binding protein 2 OS=Bos taurus GN=CTBP... [more]
LDHD_ECOLI1.828e-1227.36D-lactate dehydrogenase OS=Escherichia coli (strai... [more]
FDH2_YEAST3.118e-1230.26Formate dehydrogenase 2 OS=Saccharomyces cerevisia... [more]
FDH1_YEAST3.118e-1230.26Formate dehydrogenase 1 OS=Saccharomyces cerevisia... [more]
VANH_ENTFC4.072e-1228.50D-specific alpha-keto acid dehydrogenase OS=Entero... [more]
FDH_EMENI4.072e-1227.62Probable formate dehydrogenase OS=Emericella nidul... [more]
LDHD_DICDI5.318e-1226.25Putative D-lactate dehydrogenase OS=Dictyostelium ... [more]
CTBP2_XENLA5.318e-1224.55C-terminal-binding protein 2 OS=Xenopus laevis GN=... [more]
CTBP1_XENLA2.021e-1123.21C-terminal-binding protein 1 OS=Xenopus laevis GN=... [more]
CTBP1_RAT2.021e-1123.21C-terminal-binding protein 1 OS=Rattus norvegicus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3AA08ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258098 ID=DY258098; Name=DY258098; organism=Citrus clementina; type=EST; length=1343bp
GGGAAAAGGCCTCTGGATTTATTCAATATCTGCAGTCTCTTCAGTTCACA
AGGGTAACTGGGCGGATTTGATATAAGCAAAATGGAGGGAATGGCTAGGA
GCAGTGATAAAAACATCACCCGTGTTCTCTTTTGCGGTCCACATTTCCCT
GCTTCCCATAATTATACTAAAGAATACTTGCAAAATTACCCTTCCATTCA
GGTTGATGTGATCCCCATTAGTGATGCGCCTGATGTCATAGCAAACTACC
ATCTTTGTGTGGTAAAAACCATGCGGCTAGATTCAAATGTTATATCTCGT
GCGAATCAAATGAAGCTTATAATGCAGTTTGGGGTTGGCCTGGAAGGTGT
GGATATTAATGCTGCTACAAGATGCGGCATCAAAGTTGCTAGAATCCCAG
GTGACGTGACTGGAAATGCTGCATCGTGTGCTGAATTGACCATATATCTA
ATGCTGGGCCTTCTCAGAAAGCAGAATGAGATGAGAATGGCCATAGAGCA
AAAAAAACTTGGAGTGCCAACTGGTGAGACACTACTTGGGAAAACTGTAT
TTATCTTGGGCTTTGGAAATATTGGGGTTGAATTGGCAAAGCGCTTGCGA
CCATTTGGTGTGAAAATTATTGCCACAAAAAGGAGTTGGGCTTCTCATTC
TCAAGTTTCTTGCCAATCTAGTGCACTTGCAGTAAAAAACGGGATCATTG
ATGATTTGGTTGATGAGAAGGGTTGTCATGAAGATATTTTTAAGTTTGCT
AGCATGGCCGACGTGGTTGTTTGTTGCCTGAGTTTAAATAAGCAGACGGC
TGGCATTGTAAACAAGTCATTTCTATCTTCAATGAAAAAGGGTTCTCTTC
TGGTGAATATTGCTCGAGGAGGTCTTTTAGACTATGAGGCCATTGCTCAT
TACCTCGAATCTGGCCACTTGGGGAGGCTGGGGCATTGATGTTGCTTGGA
CAGACCCCTTTGATCCCCATGACCCCATTCTAAAGTTCAAGAATGTTTTA
ATCAACCTCAAGGTTGGAAGTGTTACCAAACATTCTTACAAATCAAGGGG
CTAAGGTTGGTTGGCCAACGTTGCCCCTCAACTTTCAGGCGGGGGACTCC
TTTGAAAAGGAACTAAAATTTGGGGAATTGAATCCACCCTTCAAAGGAAC
TCTGTTTCCATCCGGCCCAAACCTTAATAAGGCCTGGCTTTCCCTTTTTT
AACAAATCTTTTTCCCGGGGCATTTTTTGAAAAAAAAACCCCCCATTTTT
GTCTGGTTTTTTTAAAAATTTGGAAACCATATTTAACACCAACAAAAATA
TTCTCTTTAATACAACCCTCTCCTATATTGTTTTTTGTTTTTT
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