DY258104
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: PCCB_BACSU (Putative propionyl-CoA carboxylase beta chain OS=Bacillus subtilis GN=yqjD PE=3 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 1.975e-17 Identity = 32/89 (35.96%), Postives = 47/89 (52.81%), Query Frame = 2 Query: 671 GEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNE 937 G FY + S IPQI+++LG C G Y PA+ D M + G +F+ GP +++ TGE+ LGGA +H SG + + E Sbjct: 141 GHIFYRNVLYSGV-IPQISVILGPCAGGAVYSPALTDFIFMAEQTGRMFITGPKVIEKVTGEQVDAESLGGAGIHNAVSGNAHFSGHTE 228 HSP 2 Score: 45.0542 bits (105), Expect = 1.975e-17 Identity = 38/122 (31.15%), Postives = 55/122 (45.08%), Query Frame = 1 Query: 322 RKQVTSFSPRESIDRLTDPGSSSLELSQLAGHELY--EVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIF 681 ++Q + RE I L D S +EL ++ E + G++TG G + GR A D TV GG +K ++AA+ K P I L DSGGA + E + +G IF Sbjct: 27 QRQKGKLTARERIIFLLDQ-DSFIELHPFMESQVLTREQRMLGDGVVTGYGTIDGRSVYVFAQDFTVYGGALGETHARKICALMDLAAKNKAPIIGLNDSGGARI---QEGVLSLDGYGHIF 144
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: PCCB_RAT (Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus GN=Pccb PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.564e-17 Identity = 32/79 (40.51%), Postives = 45/79 (56.96%), Query Frame = 2 Query: 713 IPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNELHGL 949 IPQI+L++G C G Y PA+ D + MVK +F+ GP VK+ T E+ + LGGA H SGV+ N++ L Sbjct: 192 IPQISLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPEFVKSVTNEDVTQEQLGGAKTHTTVSGVAHRAFDNDVDAL 270 HSP 2 Score: 42.3578 bits (98), Expect = 2.564e-17 Identity = 33/106 (31.13%), Postives = 47/106 (44.34%), Query Frame = 1 Query: 349 RESIDRLTDPGSSSLELSQLAGHELYEVTLQS-------GGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAE 645 RE I L DPGS LE H + + + ++TG G ++GRL + D TV GG+ +K + + A P I L DSGGA + + E Sbjct: 69 RERISLLLDPGSF-LESDMFVEHRCADFGMAAEKNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSGAHAQKICKIMDQAITVGAPVIGLNDSGGARIQEGVE 173
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: PCC5_MYCTU (Probable propionyl-CoA carboxylase beta chain 5 OS=Mycobacterium tuberculosis GN=accD5 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.332e-17 Identity = 32/85 (37.65%), Postives = 47/85 (55.29%), Query Frame = 2 Query: 683 YNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNE 937 + I+++ IPQI+L++G+ G Y PA+ D +MV +F+ GP ++K TGEE LGGA H SG + Y A E Sbjct: 171 FRNNILASGVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMFITGPDVIKTVTGEEVTMEELGGAHTHMAKSGTAHYAASGE 255 HSP 2 Score: 43.1282 bits (100), Expect = 3.332e-17 Identity = 33/97 (34.02%), Postives = 46/97 (47.42%), Query Frame = 1 Query: 349 RESIDRLTDPGSSSLELSQLAGHE-----LYEVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGA 624 RE I L D S +EL LA H L E G++TG G + GR + D TV GG+ + +K ++ QE+A + P I + D GA Sbjct: 60 RERIYALLDE-DSFVELDALAKHRSTNFNLGEKRPLGDGVVTGYGTIDGRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGINDGAGA 155
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: PCCB_MOUSE (Propionyl-CoA carboxylase beta chain, mitochondrial OS=Mus musculus GN=Pccb PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.333e-17 Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 2 Query: 713 IPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNELHGL 949 IPQI+L++G C G Y PA+ D + MVK +F+ GP +VK+ T E+ + LGGA H SGV+ N++ L Sbjct: 192 IPQISLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPEVVKSVTNEDVTQEQLGGAKTHTTVSGVAHRAFDNDVDAL 270 HSP 2 Score: 41.5874 bits (96), Expect = 3.333e-17 Identity = 32/106 (30.19%), Postives = 47/106 (44.34%), Query Frame = 1 Query: 349 RESIDRLTDPGSSSLELSQLAGHELYEVTLQSG-------GIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAE 645 RE I L DPGS +E H + + + ++TG G ++GRL + D TV GG+ +K + + A P I L DSGGA + + E Sbjct: 69 RERISLLLDPGSF-MESDMFVEHRCADFGMAADKNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSGAHAQKICKIMDQAITVGAPVIGLNDSGGARIQEGVE 173
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: PCCB_HUMAN (Propionyl-CoA carboxylase beta chain, mitochondrial OS=Homo sapiens GN=PCCB PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 3.333e-17 Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 2 Query: 713 IPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNELHGL 949 IPQI+L++G C G Y PA+ D + MVK +F+ GP +VK+ T E+ + LGGA H SGV+ +N++ L Sbjct: 190 IPQISLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGAKTHTTMSGVAHRAFENDVDAL 268 HSP 2 Score: 41.2022 bits (95), Expect = 3.333e-17 Identity = 32/106 (30.19%), Postives = 47/106 (44.34%), Query Frame = 1 Query: 349 RESIDRLTDPGSSSLELSQLAGHELYEVTLQSG-------GIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAE 645 RE I L DPGS +E H + + + ++TG G ++GRL + D TV GG+ +K + + A P I L DSGGA + + E Sbjct: 67 RERISLLLDPGSF-VESDMFVEHRCADFGMAADKNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSGAHAQKICKIMDQAITVGAPVIGLNDSGGARIQEGVE 171
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: PCCB_BOVIN (Propionyl-CoA carboxylase beta chain, mitochondrial OS=Bos taurus GN=PCCB PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.333e-17 Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 2 Query: 713 IPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNELHGL 949 IPQI+L++G C G Y PA+ D + MVK +F+ GP +VK+ T E+ + LGGA H SGV+ +N++ L Sbjct: 190 IPQISLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGARTHTTMSGVAHRAFENDVDAL 268 HSP 2 Score: 41.2022 bits (95), Expect = 3.333e-17 Identity = 32/106 (30.19%), Postives = 47/106 (44.34%), Query Frame = 1 Query: 349 RESIDRLTDPGSSSLELSQLAGHELYEVTLQSG-------GIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAE 645 RE I L DPGS +E H + + + ++TG G ++GRL + D TV GG+ +K + + A P I L DSGGA + + E Sbjct: 67 RERISLLLDPGSF-VESDMFVEHRCADFGMAADKNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSGAHAQKICKIMDQALTVGAPVIGLNDSGGARIQEGVE 171
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: YNGE_BACSU (Uncharacterized carboxylase yngE OS=Bacillus subtilis GN=yngE PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.543e-14 Identity = 42/99 (42.42%), Postives = 55/99 (55.56%), Query Frame = 2 Query: 659 RKILGEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNELHGLSL 955 R+ G FYNQ +S IPQI L+ G AGGAYIPA D VMV GN +++L P + + GE+ +GGA +HC SG D A+ E + L Sbjct: 137 RRGAGRIFYNQVKLSGR-IPQICLLFGPSAAGGAYIPAFCDIVVMVDGNASMYLGSPRMAEMVIGEKVSLEEMGGARMHCSISGCGDILAETEEEAIQL 234 HSP 2 Score: 78.1814 bits (191), Expect = 1.307e-13 Identity = 49/130 (37.69%), Postives = 68/130 (52.31%), Query Frame = 1 Query: 349 RESIDRLTDPGSSSLELSQLAGHELYEVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIFL*SSHNVS*RHPSNCISTG 738 RE + L D +EL E L + G++T IG + G+ +AND TVK G++ T++K +R QEIA + P IYLVDS GA + Q VFP + GRIF + +S R P C+ G Sbjct: 37 RERLSLLFD---DDIELEDAFFAECMSDGLPADGVVTAIGKIGGQTVCVMANDSTVKAGSWGAKTVEKIIRIQEIAEKLNCPLIYLVDSAGARITDQINVFPGRRGAGRIFY-NQVKLSGRIPQICLLFG 162
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: 12S_PROFR (Methylmalonyl-CoA carboxyltransferase 12S subunit OS=Propionibacterium freudenreichii subsp. shermanii PE=1 SV=3) HSP 1 Score: 61.6178 bits (148), Expect = 2.326e-14 Identity = 31/89 (34.83%), Postives = 50/89 (56.18%), Query Frame = 2 Query: 671 GEFFYNQAIMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNE 937 G+ F+ +S +PQIA++ G C G +Y PA+ D +M K +F+ GP ++K+ TGE+ LGGA H SG + A+++ Sbjct: 156 GKMFFANVKLSGV-VPQIAIIAGPCAGGASYSPALTDFIIMTK-KAHMFITGPQVIKSVTGEDVTADELGGAEAHMAISGNIHFVAEDD 242 HSP 2 Score: 39.2762 bits (90), Expect = 2.326e-14 Identity = 31/116 (26.72%), Postives = 50/116 (43.10%), Query Frame = 1 Query: 349 RESIDRLTDPGSSSLELSQLAGHE-----LYEVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAEVFPDKENFGRIF 681 RE ++ L DP S E+ H + + + + G++TG G + GR + D TV GG+ K + E A P ++ DSGGA + E +G++F Sbjct: 48 RERLNNLLDPHSFD-EVGAFRKHRTTLFGMDKAVVPADGVVTGRGTILGRPVHAASQDFTVMGGSAGETQSTKVVETMEQALLTGTPFLFFYDSGGARI---QEGIDSLSGYGKMF 159
BLAST of DY258104 vs. ExPASy Swiss-Prot
Match: PCCB_RHOER (Propionyl-CoA carboxylase beta chain OS=Rhodococcus erythropolis GN=pccB PE=3 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 2.592e-12 Identity = 37/94 (39.36%), Postives = 53/94 (56.38%), Query Frame = 2 Query: 689 QAIMSAEG-IPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEESLRRILGGAAVHCKTSGVSDYFAQNELHGLSLGKTL 967 +A++ A G IPQI++VLG G AY PA+ D +M G +F+ GP +V++ TGE+ LGG H K SGV+ A +E L + L Sbjct: 117 EAMVRASGLIPQISVVLGFAAGGAAYGPALTDVVIMAP-EGRVFVTGPDVVRSVTGEQVDMVSLGGPDTHTKKSGVAHIAAHDEADALHRARRL 209 HSP 2 Score: 30.8018 bits (68), Expect = 2.592e-12 Identity = 27/107 (25.23%), Postives = 43/107 (40.19%), Query Frame = 1 Query: 331 VTSFSPRESIDRLTDPGSSSLELSQL--AGHELYEVTLQSGGIITGIGPVHGRLCMFVANDPTVKGGTYFPITIKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQAE 645 +T +P + TDP L L G + G++ G + G + +D TV GG K ++A + A + + P + L SGGA L + E Sbjct: 1 MTILAPVTKSESSTDPRDPLARLENLFDPGTTVPLHARDKSGVLAASGNIDGVRTIAYCSDATVMGGAMGVDGCKHLVKAIDTAIEEESPIVGLWHSGGARLAEGVE 107 The following BLAST results are available for this feature:
BLAST of DY258104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258104 ID=DY258104; Name=DY258104; organism=Citrus clementina; type=EST; length=1382bpback to top |