DY258114

Overview
NameDY258114
Unique NameDY258114
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1198
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: SCM2B_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-B OS=Danio rerio GN=slc25a25b PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.792e-15
Identity = 49/192 (25.52%), Postives = 81/192 (42.19%), Query Frame = 1
Query:  445 GISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGV----TDGMQDSFLASFLLGWGSQLXAGLGFYPMIRWRKRM 1008
            GI+  F + +++ G+ SLWRGN  NV++  P  A+ F   +  KRL    ++  G  +                   +Y ++  +TRLA        G   Q++G+ D  K   K +G+   Y+G+  + +G I Y G+   +Y++L    +    TD            G  S     L  YP+   R RM
Sbjct:  225 GIAGGFTQMIREGGLRSLWRGNGINVLKIAPESAIKFMAYEQIKRLIGSNQETLGILERLVSGSLAGAIAQSS----IYPMEVLKTRLA-------LGRTGQYSGIADCAKHIFKKEGMTAFYKGYIPNMLGIIPYAGIDLAVYETLKNSWLQRFATDSADPGVFVLLACGTMSSTCGQLASYPLALVRTRM 405          

HSP 2 Score: 30.8018 bits (68), Expect = 2.792e-15
Identity = 13/37 (35.14%), Postives = 25/37 (67.57%), Query Frame = 3
Query:  285 QKKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQ 395
            ++K+   +    + GG + AVS+T  AP++R+K+L+Q
Sbjct:  179 EEKNTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQ 215          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: SCM2A_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.628e-15
Identity = 54/200 (27.00%), Postives = 87/200 (43.50%), Query Frame = 1
Query:  433 HPYKGISDCF----GRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGV----TDGMQDSFLASFLLGWGSQLXAGLGFYPMIRWRKRM 1008
            H  +G S C      + +K+ G+ SLWRGN  NVI+  P  AL F   +  KR+    ++  G  + F                 +Y ++  +TRL     A +K G  Q+ G+ D  K  LK++G++  Y+G+  + +G I Y G+   +Y++L    +    T+            G  S     L  YP+   R RM
Sbjct:  217 HGCQGKSMCLMSGLTQMIKEGGVRSLWRGNGINVIKIAPETALKFMAYEQIKRVMGSSQETLGISERFVAGSLAGVIAQST----IYPMEVLKTRL-----ALRKTG--QYKGISDCAKHILKTEGMSAFYKGYVPNMLGIIPYAGIDLAVYETLKNTWLQRYGTENADPGVFVLLACGTVSSTCGQLASYPLALIRTRM 405          

HSP 2 Score: 30.0314 bits (66), Expect = 3.628e-15
Identity = 12/23 (52.17%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  327 GGVSAAVSKTAAAPIERVKLLIQ 395
            GG + AVS+T  AP++R+K+L+Q
Sbjct:  193 GGGAGAVSRTCTAPLDRLKVLMQ 215          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: GDC_HUMAN (Graves disease carrier protein OS=Homo sapiens GN=SLC25A16 PE=2 SV=3)

HSP 1 Score: 65.0846 bits (157), Expect = 6.181e-15
Identity = 49/162 (30.25%), Postives = 72/162 (44.44%), Query Frame = 1
Query:  430 SHPYK--GISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKT-LKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGVT 903
            +H YK  G+        + EG L L++GN A +IR FP  A+ F   +++K L   K    G+  +  AG+               Y LD  R RLA   K     GE  + G+I  +K    K  G  G YRG   + +G   Y G+ F  + +L  VG++
Sbjct:   68 NHHYKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGISGHVHRLMAGSMAGMTAVIC-----TYPLDMVRVRLAFQVK-----GEHSYTGIIHAFKTIYAKEGGFFGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLS 219          

HSP 2 Score: 34.6538 bits (78), Expect = 6.181e-15
Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 3
Query:  306 FLVDFLMGGVSAAVSKTAAAPIERVKLLIQ 395
            +L  FL GG++   +KT  AP++RVK+L+Q
Sbjct:   36 WLRSFLAGGIAGCCAKTTVAPLDRVKVLLQ 65          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: GDC_BOVIN (Graves disease carrier protein OS=Bos taurus GN=SLC25A16 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 8.034e-15
Identity = 49/162 (30.25%), Postives = 72/162 (44.44%), Query Frame = 1
Query:  430 SHPYK--GISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKT-LKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGVT 903
            +H Y+  G+        K EG L L++GN A +IR FP  A+ F   +++K L   K    G+  +  AG+               Y LD  R RLA   K     GE  + G+I  +K    K  G  G YRG   + +G   Y G+ F  + +L  VG++
Sbjct:   66 NHHYRHLGVFSTLRAVPKKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGVSGHVHRLMAGSMAGMTAVIC-----TYPLDMVRVRLAFQVK-----GEHTYTGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLS 217          

HSP 2 Score: 34.6538 bits (78), Expect = 8.034e-15
Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 3
Query:  306 FLVDFLMGGVSAAVSKTAAAPIERVKLLIQ 395
            +L  FL GG++   +KT  AP++RVK+L+Q
Sbjct:   34 WLRSFLAGGIAGCCAKTTVAPLDRVKVLLQ 63          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: SCMC2_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus tropicalis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.032e-14
Identity = 50/188 (26.60%), Postives = 85/188 (45.21%), Query Frame = 1
Query:  460 FGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDG-YWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGV----TDGMQDSFLASFLLGWGSQLXAGLGFYPMIRWRKRM 1008
            F + +++ GI SLWRGN  NVI+  P  A+ F   +  KR+    ++  G + +  AG+              +Y ++  +TR+     A +K G  Q+ G++D  KK L  +G++  Y+G+  + +G I Y G+   +Y++L    +    T             G  S     L  YP+   R RM
Sbjct:  274 FTQMIREGGIRSLWRGNGINVIKIAPESAIKFMAYEQMKRIIGSDQETLGIHERLVAGSLAGVIAQSS-----IYPMEVLKTRM-----ALRKTG--QYQGMLDCGKKILLKEGVSAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQRYATSSADPGVFVLLACGTISSTCGQLASYPLALVRTRM 449          

HSP 2 Score: 30.4166 bits (67), Expect = 1.032e-14
Identity = 13/37 (35.14%), Postives = 24/37 (64.86%), Query Frame = 3
Query:  285 QKKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQ 395
            ++K    +    + GG + AVS+T  AP++R+K+L+Q
Sbjct:  223 EEKQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQ 259          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: S2542_HUMAN (Solute carrier family 25 member 42 OS=Homo sapiens GN=SLC25A42 PE=1 SV=2)

HSP 1 Score: 64.6994 bits (156), Expect = 2.978e-14
Identity = 43/144 (29.86%), Postives = 69/144 (47.92%), Query Frame = 1
Query:  469 TVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRL----FNFKKDRDGYW-KWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSL 885
            T  +EG LSLWRGN+A ++R  P  A+ F+  + +KR+    + F+ +    W + FAG                Y LD  R R+A   K         ++ +  V+ +  + +G+  LY GF  + +G I Y GL F  Y++L
Sbjct:   80 TYLNEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGSYYGFRGEALPPWPRLFAG-----ALAGTTAASLTYPLDLVRARMAVTPK-------EMYSNIFHVFIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETL 211          

HSP 2 Score: 32.7278 bits (73), Expect = 2.978e-14
Identity = 15/44 (34.09%), Postives = 25/44 (56.82%), Query Frame = 3
Query:  270 SYKLHQKKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQKS 401
            S  +  K+     L   L G ++ A++KTA AP++R K++ Q S
Sbjct:   21 SSSVSSKRDHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQVS 64          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: GDC_MOUSE (Graves disease carrier protein homolog OS=Mus musculus GN=Slc25a16 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 6.522e-14
Identity = 45/167 (26.95%), Postives = 74/167 (44.31%), Query Frame = 1
Query:  409 MIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKT-LKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGVT 903
            ++++    + + G+        + EG L L++GN A +IR FP  A+ F   +++K     K    G+  +  AG+               Y LD  R RLA   K     GE  ++G+I  +K    K  G  G YRG   + +G   Y G+ F  + +L  VG++
Sbjct:   63 LLQAHNRHYKHLGVLSTLRAVPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFITTKLGVSGHVHRLMAGSMAGMTAVIC-----TYPLDVVRVRLAFQVK-----GEHTYSGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLS 219          

HSP 2 Score: 34.6538 bits (78), Expect = 6.522e-14
Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 3
Query:  306 FLVDFLMGGVSAAVSKTAAAPIERVKLLIQ 395
            +L  FL GG++   +KT  AP++RVK+L+Q
Sbjct:   36 WLRSFLAGGIAGCCAKTTVAPLDRVKVLLQ 65          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: S2542_RAT (Solute carrier family 25 member 42 OS=Rattus norvegicus GN=Slc25a42 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 8.484e-14
Identity = 43/144 (29.86%), Postives = 69/144 (47.92%), Query Frame = 1
Query:  469 TVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRL----FNFKKDRDGYW-KWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSL 885
            T  +EG LSLWRGN+A ++R  P  A+ F+  + +KR+    + F+ +    W +  AG                Y LD  R R+A   K         ++ +  V+ +  + +G+  LY GF+ + +G I Y GL F  Y+SL
Sbjct:   80 TYLNEGFLSLWRGNSATMVRVIPYAAIQFSAHEEYKRILGHYYGFRGEALPPWPRLLAG-----ALAGTTAASLTYPLDLVRARMAVTPK-------EMYSNIFHVFIRISREEGLKTLYFGFTPTVLGVIPYAGLSFFTYESL 211          

HSP 2 Score: 32.3426 bits (72), Expect = 8.484e-14
Identity = 17/44 (38.64%), Postives = 28/44 (63.64%), Query Frame = 3
Query:  270 SYKLHQKKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQKS 401
            S K + ++ LSS L     G ++ A++KTA AP++R K++ Q S
Sbjct:   25 STKANHRQVLSSLL----SGALAGALAKTAVAPLDRTKIIFQVS 64          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: S2542_MOUSE (Solute carrier family 25 member 42 OS=Mus musculus GN=Slc25a42 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.102e-13
Identity = 43/144 (29.86%), Postives = 69/144 (47.92%), Query Frame = 1
Query:  469 TVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRL----FNFKKDRDGYW-KWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSL 885
            T  +EG LSLWRGN+A ++R  P  A+ F+  + +KR+    + F+ +    W +  AG                Y LD  R R+A   K         ++ +  V+ +  + +G+  LY GF+ + +G I Y GL F  Y+SL
Sbjct:   80 TYLNEGFLSLWRGNSATMVRVIPYAAIQFSAHEEYKRILGHYYGFRGEALPPWPRLLAG-----ALAGTTAASLTYPLDLVRARMAVTPK-------EMYSNIFHVFIRISREEGLKTLYFGFTPTVLGVIPYAGLSFFTYESL 211          

HSP 2 Score: 31.9574 bits (71), Expect = 1.102e-13
Identity = 14/38 (36.84%), Postives = 23/38 (60.53%), Query Frame = 3
Query:  288 KKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQKS 401
            K+     L   L G ++ A++KTA AP++R K++ Q S
Sbjct:   27 KRDHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQVS 64          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: CMC2_CAEEL (Putative calcium-binding mitochondrial carrier F55A11.4 OS=Caenorhabditis elegans GN=F55A11.4 PE=5 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.409e-13
Identity = 54/195 (27.69%), Postives = 81/195 (41.54%), Query Frame = 1
Query:  445 GISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRD---GYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGV----TDGMQDSFLASFLLGWGSQLXAGLGFYPMIRWRKRM 1008
            G+  C      + GI S WRGN  NVI+  P  A+ F   D  KRL   KK  +    + +  AG+              +Y ++  +TRL     A +K G+    G+I    K    +GI   Y+G+  + +G I Y G+   +Y++L    V    T+  +   LA    G  S     L  YP    R R+
Sbjct:  287 GVMSCLKLLHAEGGIKSFWRGNGINVIKIAPESAIKFMCYDQLKRLIQKKKGNEEISTFERLCAGSAAGAISQST-----IYPMEVMKTRL-----ALRKTGQLD-RGIIHFAHKMYTKEGIRCFYKGYLPNLIGIIPYAGIDLAIYETLKRTYVRYYETNSSEPGVLALLACGTCSSTCGQLSSYPFALVRTRL 470          

HSP 2 Score: 29.6462 bits (65), Expect = 1.409e-13
Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 3
Query:  327 GGVSAAVSKTAAAPIERVKLLIQ 395
            GG + AVS+T  AP +R+K+ +Q
Sbjct:  255 GGAAGAVSRTCTAPFDRIKVYLQ 277          
The following BLAST results are available for this feature:
BLAST of DY258114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
SCM2B_DANRE2.792e-1525.52Calcium-binding mitochondrial carrier protein SCaM... [more]
SCM2A_DANRE3.628e-1527.00Calcium-binding mitochondrial carrier protein SCaM... [more]
GDC_HUMAN6.181e-1530.25Graves disease carrier protein OS=Homo sapiens GN=... [more]
GDC_BOVIN8.034e-1530.25Graves disease carrier protein OS=Bos taurus GN=SL... [more]
SCMC2_XENTR1.032e-1426.60Calcium-binding mitochondrial carrier protein SCaM... [more]
S2542_HUMAN2.978e-1429.86Solute carrier family 25 member 42 OS=Homo sapiens... [more]
GDC_MOUSE6.522e-1426.95Graves disease carrier protein homolog OS=Mus musc... [more]
S2542_RAT8.484e-1429.86Solute carrier family 25 member 42 OS=Rattus norve... [more]
S2542_MOUSE1.102e-1329.86Solute carrier family 25 member 42 OS=Mus musculus... [more]
CMC2_CAEEL1.409e-1327.69Putative calcium-binding mitochondrial carrier F55... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3AC12ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258114 ID=DY258114; Name=DY258114; organism=Citrus clementina; type=EST; length=1198bp
GACATTACGGTGGTCCTCCACACTAGGCGACCTCCTCAGGTCACCATCTT
CAGCTTGCAAACACGGCAGTTGGACCGTATCCATCCGTATTTTCAGAAAA
ATGCAAGGGCCAGTCATACTTCATCTTCTGGGGGTCCTCCCCCAATCTGT
ATGCCCACAACTACAGTGTGGGCAGAGTTCCTTCGTTAATAGAGGTTTCA
CAGAATTCTTTTTGGGCAGCAAGTCAGAGGAACTGGCCTGGCACTTGTGT
CTCCTGGTTTCTCCTATATTCGTACAAGCTCCATCAGAAAAAAAGTCTTT
CTTCTTTTTTGGTGGATTTTCTCATGGGAGGAGTTTCAGCAGCTGTTTCC
AAGACTGCAGCTGCTCCTATTGAGCGGGTTAAGCTTTTGATTCAGAAATC
AAGATGAGATGATCAAGAGTGGTCGGCTCTCGCATCCGTACAAGGGGATT
TCTGATTGCTTTGGTAGAACTGTTAAGGATGAAGGCATACTATCTCTTTG
GAGAGGCAACACTGCCAATGTTATCAGATACTTCCCTACCCAGGCCCTGA
ACTTTGCATTCAAGGATTACTTTAAGAGGCTGTTTAACTTCAAGAAAGAC
AGAGATGGCTACTGGAAGTGGTTTGCTGGGAACTTGGCATCTGGTGGGGC
TGCTGGTGCTTCATCGCTTCTTTTTGTGTATTCGCTTGACTATGCAAGAA
CACGTTTGGCAAATGATGCTAAGGCAGCTAAAAAGGGTGGGGAAAGGCAG
TTTAATGGTTTGATTGATGTCTACAAGAAGACTCTGAAATCTGATGGCAT
TGCTGGGCTCTACCGTGGATTCAGCATCTCATGTGTTGGAAATATAGTGT
ATCGTGGGCTCTACTTTGGAATGTACGATTCTCTAAACCCTGTGGGTGTG
ACTGATGGGATGCAGGATAGTTTCTTGGCTAGCTTCTTACTTGGCTGGGG
ATCACAATTGGNTGCTGGTTTGGGCTTCTACCCAATGATACGGTGGCGAA
AAAGGATGGATGATGACCTCCGGAGAAGCTGTGAAGTACAAGAACTCCTT
TTCATGCATTCCAGGAAATTAAAAAAAAATGGAAGGCCAAAACAACCCTT
CCAAAGGGGCCGGGGGGAAAAATTTTGCGGGGGTGGGGGGGGGGGGGGGG
GGGGGGGTTGGCCCGGGATAAAAAAAAAGCCACCCCGGGTTCATTTTG
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