DY258114

Overview
NameDY258114
Unique NameDY258114
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1198
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: MCFB_DICDI (Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.844e-13
Identity = 49/192 (25.52%), Postives = 75/192 (39.06%), Query Frame = 1
Query:  442 KGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDG---YWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGVTDGMQDSFLASFLLGWGSQLXAGLGFYPMIRWRKRM 1008
            +GI          EG +  ++GN  NVIR  P  A+ F   + +K       D+     Y   F G                Y LD  R+RL       K      +NG+ D  K  ++ +G+AGLY+G   S +G   Y  + F  Y++L    +      + + S   G  S   A    YP+   R+R+
Sbjct:  183 RGIIQSLKTMYTTEGFIGFFKGNGTNVIRIAPYSAIQFLSYEKYKNFLLNNNDQTHLTTYENLFVGGAAGVTSLLC-----TYPLDLIRSRLTVQVFGNK------YNGIADTCKMIIREEGVAGLYKGLFASALGVAPYVAINFTTYENLKKTFIPKDTTPTVVQSLTFGAISGATAQTLTYPIDLIRRRL 363          

HSP 2 Score: 33.4982 bits (75), Expect = 1.844e-13
Identity = 20/48 (41.67%), Postives = 31/48 (64.58%), Query Frame = 3
Query:  258 FLLYSYK--LHQKKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQ 395
            +L YS K  +H    + S+ +  L GGV+ AVS+T  +P+ER+K+L Q
Sbjct:  121 WLQYSTKPIVHAPADVPSWKL-LLSGGVAGAVSRTCTSPLERLKILNQ 167          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: S2542_DANRE (Solute carrier family 25 member 42 OS=Danio rerio GN=slc25a42 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 4.075e-13
Identity = 38/140 (27.14%), Postives = 62/140 (44.29%), Query Frame = 1
Query:  466 RTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSL 885
            RT   +G  SLWRGN+A ++R  P  A+ F   + +K +        G                       Y LD  R R+A   K         ++ ++DV+ +  + +G+  LYRGF+ + +G + Y GL F  Y++L
Sbjct:   81 RTYLKDGFFSLWRGNSATMVRVIPYAAIQFCAHEQYKGILGKYYGFQGKALPPVPRLLAGSLAGTTAAIITYPLDMVRARMAVTPK-------EMYSNIMDVFVRISREEGLKTLYRGFTPTILGVVPYAGLSFFTYETL 213          

HSP 2 Score: 31.187 bits (69), Expect = 4.075e-13
Identity = 14/33 (42.42%), Postives = 21/33 (63.64%), Query Frame = 3
Query:  303 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQKS 401
            S L   + G  + AV+KTA AP++R K++ Q S
Sbjct:   34 SVLNSLVSGAFAGAVAKTAVAPLDRTKIIFQVS 66          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: SCMC2_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Homo sapiens GN=SLC25A25 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 5.236e-13
Identity = 48/193 (24.87%), Postives = 86/193 (44.56%), Query Frame = 1
Query:  445 GISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGV----TDGMQDSFLASFLLGWGSQLXAGLGFYPMIRWRKRM 1008
            GI   F + +++ G  SLWRGN  NV++  P  A+ F   +  KRL    ++    + +  AG+              +Y ++  +TR+     A +K G  Q++G++D  ++ L  +G+A  Y+G+  + +G I Y G+   +Y++L    +     +            G  S     L  YP+   R RM
Sbjct:  225 GIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKFMAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSS-----IYPMEVLKTRM-----ALRKTG--QYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQHYAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRM 405          

HSP 2 Score: 30.0314 bits (66), Expect = 5.236e-13
Identity = 12/23 (52.17%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  327 GGVSAAVSKTAAAPIERVKLLIQ 395
            GG + AVS+T  AP++R+K+L+Q
Sbjct:  193 GGGAGAVSRTCTAPLDRLKVLMQ 215          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: SCMC2_RAT (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Rattus norvegicus GN=Slc25a25 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 6.801e-13
Identity = 47/188 (25.00%), Postives = 84/188 (44.68%), Query Frame = 1
Query:  460 FGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDG-YWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGV----TDGMQDSFLASFLLGWGSQLXAGLGFYPMIRWRKRM 1008
            F + +++ G  SLWRGN  NV++  P  A+ F   +  KRL    ++    + +  AG+              +Y ++  +TR+A      +K G  Q++G++D  K+ L  +G+A  Y+G+  + +G I Y G+   +Y++L    +     +            G  S     L  YP+   R RM
Sbjct:  230 FTQMIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKRLVGSDQETLRIHERLVAGSLAGAIAQSS-----IYPMEVLKTRMA-----LRKTG--QYSGMLDCAKRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRM 405          

HSP 2 Score: 30.0314 bits (66), Expect = 6.801e-13
Identity = 12/23 (52.17%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  327 GGVSAAVSKTAAAPIERVKLLIQ 395
            GG + AVS+T  AP++R+K+L+Q
Sbjct:  193 GGGAGAVSRTCTAPLDRLKVLMQ 215          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: MCFP_DICDI (Mitochondrial substrate carrier family protein P OS=Dictyostelium discoideum GN=mcfP PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 6.891e-13
Identity = 42/144 (29.17%), Postives = 67/144 (46.53%), Query Frame = 1
Query:  466 RTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWF-AGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPV 894
            + V++EGI  LWRGN+A ++R FP  A+ F   +  K   +   D+   ++ F AG+               Y LD  R RLA   +  KK  +        + K T   DG+ G+YRG   + +G + Y G+ F  ++ L  +
Sbjct:   60 KIVENEGIKGLWRGNSATILRVFPYAAVQFLSYETIKN--HLVADKSSSFQIFLAGSAAGGIAVCA-----TYPLDLLRARLA--IEIHKKPTKPH-----HLLKSTFTKDGVKGIYRGIQPTLIGILPYGGISFSTFEFLKRI 189          

HSP 2 Score: 35.4242 bits (80), Expect = 6.891e-13
Identity = 15/28 (53.57%), Postives = 21/28 (75.00%), Query Frame = 3
Query:  312 VDFLMGGVSAAVSKTAAAPIERVKLLIQ 395
            V FL GG++   +K+A AP+ERVK+L Q
Sbjct:   16 VSFLSGGLAGVTAKSAVAPLERVKILYQ 43          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: SCMC2_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Bos taurus GN=SLC25A25 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 8.832e-13
Identity = 47/188 (25.00%), Postives = 84/188 (44.68%), Query Frame = 1
Query:  460 FGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDG-YWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGV----TDGMQDSFLASFLLGWGSQLXAGLGFYPMIRWRKRM 1008
            F + +++ G  SLWRGN  NV++  P  A+ F   +  KRL    ++    + +  AG+              +Y ++  +TR+A      +K G  Q++G++D  +K L  +G+A  Y+G+  + +G I Y G+   +Y++L    +     +            G  S     L  YP+   R RM
Sbjct:  230 FTQMIREGGARSLWRGNGINVLKIAPESAIKFMAYEQIKRLIGSDQETLRIHERLVAGSLAGAIAQSS-----IYPMEVLKTRMA-----LRKTG--QYSGMLDCARKILAREGMAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQRYAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRM 405          

HSP 2 Score: 30.0314 bits (66), Expect = 8.832e-13
Identity = 12/23 (52.17%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  327 GGVSAAVSKTAAAPIERVKLLIQ 395
            GG + AVS+T  AP++R+K+L+Q
Sbjct:  193 GGGAGAVSRTCTAPLDRLKVLMQ 215          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: GDC_RAT (Graves disease carrier protein (Fragment) OS=Rattus norvegicus GN=Slc25a16 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.926e-13
Identity = 47/162 (29.01%), Postives = 71/162 (43.83%), Query Frame = 1
Query:  430 SHPYK--GISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKT-LKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGVT 903
            +H YK  G+        + EG L L++GN A +IR FP  A+ F   +++K     K    G+  +  AG+               Y LD  R RLA   K     GE  ++G+I  +K    K  G  G YRG   + +G   Y  + F  + +L  VG++
Sbjct:   68 NHHYKHLGVLSPLRAVPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFITTKLGVSGHVHRLMAGSMAGKMSMTAVIC--TYPLDVVRVRLAFQVK-----GEHTYSGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYASVSFFTFGTLKSVGLS 222          

HSP 2 Score: 32.3426 bits (72), Expect = 8.926e-13
Identity = 13/30 (43.33%), Postives = 21/30 (70.00%), Query Frame = 3
Query:  306 FLVDFLMGGVSAAVSKTAAAPIERVKLLIQ 395
            +L  FL G ++   +KT  AP++RVK+L+Q
Sbjct:   36 WLRSFLAGSIAGCCAKTTVAPLDRVKVLLQ 65          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: SCMC2_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Mus musculus GN=Slc25a25 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.489e-12
Identity = 46/188 (24.47%), Postives = 84/188 (44.68%), Query Frame = 1
Query:  460 FGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDG-YWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGV----TDGMQDSFLASFLLGWGSQLXAGLGFYPMIRWRKRM 1008
            F + +++ G  SLWRGN  NV++  P  A+ F   +  KRL    ++    + +  AG+              +Y ++  +TR+A      +K G  Q++G++D  ++ L  +G+A  Y+G+  + +G I Y G+   +Y++L    +     +            G  S     L  YP+   R RM
Sbjct:  230 FTQMIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKRLVGSDQETLRIHERLVAGSLAGAIAQSS-----IYPMEVLKTRMA-----LRKTG--QYSGMLDCARRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRM 405          

HSP 2 Score: 30.0314 bits (66), Expect = 1.489e-12
Identity = 12/23 (52.17%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  327 GGVSAAVSKTAAAPIERVKLLIQ 395
            GG + AVS+T  AP++R+K+L+Q
Sbjct:  193 GGGAGAVSRTCTAPLDRLKVLMQ 215          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: SCMC3_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Mus musculus GN=Slc25a23 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.490e-12
Identity = 48/183 (26.23%), Postives = 82/183 (44.81%), Query Frame = 1
Query:  472 VKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGVTDGMQDSFLASF--LLGWG--SQLXAGLGFYPMIRWRKRM 1008
            +++ G+LSLWRGN  NV++  P  A+ F   +  KR    +++     + F                 +Y ++  +TRL       ++ G  Q+ GL+D  K+ L+ +G    YRG+  + +G I Y G+   +Y++L    +     +S       LLG G  S     +  YP+   R RM
Sbjct:  232 IQEGGVLSLWRGNGINVLKIAPESAIKFMAYEQIKRAIRGQQETLHVQERFVAG----SLAGATAQTIIYPMEVLKTRL-----TLRRTG--QYKGLLDCAKRILEREGPRAFYRGYLPNVLGIIPYAGIDLAVYETLKNRWLQQYSHESANPGILVLLGCGTISSTCGQIASYPLALVRTRM 403          

HSP 2 Score: 29.261 bits (64), Expect = 1.490e-12
Identity = 12/37 (32.43%), Postives = 23/37 (62.16%), Query Frame = 3
Query:  285 QKKSLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQ 395
            ++K    +    + G V+ AVS+T  AP++R+K+ +Q
Sbjct:  177 EEKLTGMWWKQLVAGAVAGAVSRTGTAPLDRLKVFMQ 213          
BLAST of DY258114 vs. ExPASy Swiss-Prot
Match: CMC3_CAEBR (Probable calcium-binding mitochondrial carrier CBG00135 OS=Caenorhabditis briggsae GN=CBG00135 PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 7.113e-12
Identity = 51/194 (26.29%), Postives = 80/194 (41.24%), Query Frame = 1
Query:  445 GISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKK---DRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGNIVYRGLYFGMYDSLNPVGV---TDGMQDSFLASFLLGWGSQLXAGLGFYPMIRWRKRM 1008
            G+  C      + G+ S WRGN  NVI+  P  A+ F   D  KR     K   +   Y + FAG+              +Y ++  +TRL     A ++ G+    G+I    K    +GI   Y+G+  + +G I Y G+   +Y++L        T+  +   LA    G  S     L  YP+   R R+
Sbjct:  284 GVVSCVHLLHAEGGLKSFWRGNGINVIKIAPESAMKFMSYDQIKRWIQEYKGGAELTTYERLFAGSSAGAISQTA-----IYPMEVMKTRL-----ALRRTGQLD-RGMIHFAHKMYDKEGIRCFYKGYLPNLLGIIPYAGIDLTVYETLKSCYTQYYTEHTEPGVLALLACGTCSSTCGQLASYPLALVRTRL 466          

HSP 2 Score: 30.0314 bits (66), Expect = 7.113e-12
Identity = 11/23 (47.83%), Postives = 18/23 (78.26%), Query Frame = 3
Query:  327 GGVSAAVSKTAAAPIERVKLLIQ 395
            GGV+ A+S+T  AP +R+K+ +Q
Sbjct:  252 GGVAGAMSRTCTAPFDRIKVYLQ 274          
The following BLAST results are available for this feature:
BLAST of DY258114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
MCFB_DICDI1.844e-1325.52Mitochondrial substrate carrier family protein B O... [more]
S2542_DANRE4.075e-1327.14Solute carrier family 25 member 42 OS=Danio rerio ... [more]
SCMC2_HUMAN5.236e-1324.87Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC2_RAT6.801e-1325.00Calcium-binding mitochondrial carrier protein SCaM... [more]
MCFP_DICDI6.891e-1329.17Mitochondrial substrate carrier family protein P O... [more]
SCMC2_BOVIN8.832e-1325.00Calcium-binding mitochondrial carrier protein SCaM... [more]
GDC_RAT8.926e-1329.01Graves disease carrier protein (Fragment) OS=Rattu... [more]
SCMC2_MOUSE1.489e-1224.47Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC3_MOUSE1.490e-1226.23Calcium-binding mitochondrial carrier protein SCaM... [more]
CMC3_CAEBR7.113e-1226.29Probable calcium-binding mitochondrial carrier CBG... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3AC12ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258114 ID=DY258114; Name=DY258114; organism=Citrus clementina; type=EST; length=1198bp
GACATTACGGTGGTCCTCCACACTAGGCGACCTCCTCAGGTCACCATCTT
CAGCTTGCAAACACGGCAGTTGGACCGTATCCATCCGTATTTTCAGAAAA
ATGCAAGGGCCAGTCATACTTCATCTTCTGGGGGTCCTCCCCCAATCTGT
ATGCCCACAACTACAGTGTGGGCAGAGTTCCTTCGTTAATAGAGGTTTCA
CAGAATTCTTTTTGGGCAGCAAGTCAGAGGAACTGGCCTGGCACTTGTGT
CTCCTGGTTTCTCCTATATTCGTACAAGCTCCATCAGAAAAAAAGTCTTT
CTTCTTTTTTGGTGGATTTTCTCATGGGAGGAGTTTCAGCAGCTGTTTCC
AAGACTGCAGCTGCTCCTATTGAGCGGGTTAAGCTTTTGATTCAGAAATC
AAGATGAGATGATCAAGAGTGGTCGGCTCTCGCATCCGTACAAGGGGATT
TCTGATTGCTTTGGTAGAACTGTTAAGGATGAAGGCATACTATCTCTTTG
GAGAGGCAACACTGCCAATGTTATCAGATACTTCCCTACCCAGGCCCTGA
ACTTTGCATTCAAGGATTACTTTAAGAGGCTGTTTAACTTCAAGAAAGAC
AGAGATGGCTACTGGAAGTGGTTTGCTGGGAACTTGGCATCTGGTGGGGC
TGCTGGTGCTTCATCGCTTCTTTTTGTGTATTCGCTTGACTATGCAAGAA
CACGTTTGGCAAATGATGCTAAGGCAGCTAAAAAGGGTGGGGAAAGGCAG
TTTAATGGTTTGATTGATGTCTACAAGAAGACTCTGAAATCTGATGGCAT
TGCTGGGCTCTACCGTGGATTCAGCATCTCATGTGTTGGAAATATAGTGT
ATCGTGGGCTCTACTTTGGAATGTACGATTCTCTAAACCCTGTGGGTGTG
ACTGATGGGATGCAGGATAGTTTCTTGGCTAGCTTCTTACTTGGCTGGGG
ATCACAATTGGNTGCTGGTTTGGGCTTCTACCCAATGATACGGTGGCGAA
AAAGGATGGATGATGACCTCCGGAGAAGCTGTGAAGTACAAGAACTCCTT
TTCATGCATTCCAGGAAATTAAAAAAAAATGGAAGGCCAAAACAACCCTT
CCAAAGGGGCCGGGGGGAAAAATTTTGCGGGGGTGGGGGGGGGGGGGGGG
GGGGGGGTTGGCCCGGGATAAAAAAAAAGCCACCCCGGGTTCATTTTG
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