DY258125

Overview
NameDY258125
Unique NameDY258125
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1354
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9968 contig Ccv1_Contig9968:4..1357. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258125 vs. ExPASy Swiss-Prot
Match: Y047_METJA (Uncharacterized protein MJ0047 OS=Methanocaldococcus jannaschii GN=MJ0047 PE=3 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 9.429e-25
Identity = 92/352 (26.14%), Postives = 168/352 (47.73%), Query Frame = 3
Query:    3 VFMTHATKAIYKLLLTDYVLVSKVSVEDMLFDEQDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVR-VLYTGDYSREEDRHLRAAELPQFSPDI--CIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIRNQFANSN-PFKFKHISPLNSIDDLSDVGPSVVMASPGGLQSGLSRQLFDIWCSDKKNACVIPGYLVEGTLAKTIISEPKEVTLMNGLTAPLNMQGHYISFSAHADYAQTSTFLKELMAPNIILVHGESHE----KGEAQKQAYDPIT 1034
            V  T  +K + K+LL D V +++   + + ++  D+  ++     L+++         +  ++AGH+ G+A  +++    + +LYTGD    + R  + A+L     DI   IIESTYG  +H  R   E  F + I   + +GG  LIP +A+ RAQE+LLIL++Y  + P        Y   +A +   +   Y   +NE  + + A  N     K    + +I++LS  G  +V+ + G L  G       ++  + KNA ++ GY V  +  + +I E  ++ +      P N++    +FS HA   +    +K++    +I+ HGE  +    +  A +  +D IT
Sbjct:   78 VITTELSKKLIKVLLKDMVKIAETENKKIPYNNHDVKEAIRHTIPLNYNDKKYYKDFSYELFSAGHIPGSASILLNYQNNKTILYTGDVKLRDTRLTKGADLSYTKDDIDILIIESTYGNSIHPDRKAVELSFIEKIKEILFRGGVALIPVFAVDRAQEILLILNDYNIDAP-------IYLDGMAVEVTKLMLNYKHMLNESSQLEKALKNVKIIEKSEDRIKAIENLSKNG-GIVVTTAGMLDGGPILYYLKLFMHNPKNALLLTGYQVRDSNGRHLI-ETGKIFIGKDEIKP-NLEVCMYNFSCHAGMDELHEIIKKVNPELLIIQHGEEVQATILRNWALEHGFDAIT 419          
BLAST of DY258125 vs. ExPASy Swiss-Prot
Match: CPSF2_HUMAN (Cleavage and polyadenylation specificity factor subunit 2 OS=Homo sapiens GN=CPSF2 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 3.583e-24
Identity = 98/376 (26.06%), Postives = 171/376 (45.48%), Query Frame = 3
Query:   15 HATKAIYKL--LLTDYVLVSKVSVEDM-LFDEQDINRSMDRIEVLDFHQTVEV----NGIKFWCYTAGHVLGAAMFMVDIAGVR-VLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIR--ERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQ---TYILSMNERIRNQFAN--SNPFKFKHISPLNSIDDLSDV-GPSVVMASPGGLQSGLSRQLFDIWCSDKKNACVIPGYLVEGTLAKTIISEPKEVTLMNGLTAPLNMQGHYI-------------------SFSAHADYAQTSTFLKELMAPNI------ILVHGESHEKGEAQKQA 1019
            +AT  +YK+  +    +  S+ + ED  LF   D++ + D+I+ L F Q V +    +G+      AGH++G  ++ +   G   ++Y  D++ + + HL    L   S    +I  ++     QPR  +  E+  T+V+  T+   G VLI     GR  EL  +LD+ W        + +Y  + L      V +   + +  M++++   F +  +NPF+F+H+S  + + DL+ V  P VV+AS   L+ G SR LF  WC D KN+ ++      GTLA+ +I  P E      L   + ++G  +                   S  A  D +  S   +++  P+       +++ GE   KG   KQA
Sbjct:   85 YATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLE-TLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDA--GLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSSDESDIEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQA 457          
BLAST of DY258125 vs. ExPASy Swiss-Prot
Match: CPSF2_BOVIN (Cleavage and polyadenylation specificity factor subunit 2 OS=Bos taurus GN=CPSF2 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.583e-24
Identity = 86/308 (27.92%), Postives = 150/308 (48.70%), Query Frame = 3
Query:   15 HATKAIYKL--LLTDYVLVSKVSVEDM-LFDEQDINRSMDRIEVLDFHQTVEV----NGIKFWCYTAGHVLGAAMFMVDIAGVR-VLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIR--ERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQ---TYILSMNERIRNQFAN--SNPFKFKHISPLNSIDDLSDV-GPSVVMASPGGLQSGLSRQLFDIWCSDKKNACVIPGYLVEGTLAKTIISEPKEVTLMNGLTAPLNMQG 890
            +AT  +YK+  +    +  S+ + ED  LF   D++ + D+I+ L F Q V +    +G+      AGH++G  ++ +   G   ++Y  D++ + + HL    L   S    +I  ++     QPR  +  E+  T+V+  T+   G VLI     GR  EL  +LD+ W        + +Y  + L      V +   + +  M++++   F +  +NPF+F+H+S  + + DL+ V  P VV+AS   L+ G SR LF  WC D KN+ ++      GTLA+ +I  P E      L   + ++G
Sbjct:   85 YATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLE-TLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDA--GLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKVTEIELRKRVKLEG 389          
BLAST of DY258125 vs. ExPASy Swiss-Prot
Match: CPSF2_MOUSE (Cleavage and polyadenylation specificity factor subunit 2 OS=Mus musculus GN=Cpsf2 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.680e-24
Identity = 86/308 (27.92%), Postives = 150/308 (48.70%), Query Frame = 3
Query:   15 HATKAIYKL--LLTDYVLVSKVSVEDM-LFDEQDINRSMDRIEVLDFHQTVEV----NGIKFWCYTAGHVLGAAMFMVDIAGVR-VLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIR--ERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQ---TYILSMNERIRNQFAN--SNPFKFKHISPLNSIDDLSDV-GPSVVMASPGGLQSGLSRQLFDIWCSDKKNACVIPGYLVEGTLAKTIISEPKEVTLMNGLTAPLNMQG 890
            +AT  +YK+  +    +  S+ + ED  LF   D++ + D+I+ L F Q V +    +G+      AGH++G  ++ +   G   ++Y  D++ + + HL    L   S    +I  ++     QPR  +  E+  T+V+  T+   G VLI     GR  EL  +LD+ W        + +Y  + L      V +   + +  M++++   F +  +NPF+F+H+S  + + DL+ V  P VV+AS   L+ G SR LF  WC D KN+ ++      GTLA+ +I  P E      L   + ++G
Sbjct:   85 YATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLE-TLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDA--GLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPTEKVTEIELRKRVKLEG 389          
BLAST of DY258125 vs. ExPASy Swiss-Prot
Match: CPSF2_DROME (Probable cleavage and polyadenylation specificity factor subunit 2 OS=Drosophila melanogaster GN=Cpsf100 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 4.680e-24
Identity = 74/258 (28.68%), Postives = 128/258 (49.61%), Query Frame = 3
Query:   90 LFDEQDINRSMDRIEVLDFHQTVEVN----GIKFWCYTAGHVLGAAMF-MVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRN-IRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPE-FHNIPIYYASPLAKKCMAVYQTYILSMNERIRNQF--ANSNPFKFKHISPLNSIDDLSDV--GPSVVMASPGGLQSGLSRQLFDIWCSDKKNACVIPGYLVEGTLAKTII 830
            LF   D++ + ++I  L ++QTV +     GI      AGH++G  ++ +V +    ++Y  D++ +++RHL   EL +      +I   Y  Q  Q R   R+ +    I  T+   G VLI     GR  EL  +LD+ W N         +   + ++   +   ++ I  M++++   F  A +NPF+FKHI   +S+ D+  +  GP VV+AS   L+SG +R LF  W S+  N+ ++      GTLA  ++
Sbjct:  113 LFSLDDVDTAFEKITQLKYNQTVSLKDKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTAGRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARNNPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRTSPGTLAMELV 370          
BLAST of DY258125 vs. ExPASy Swiss-Prot
Match: CPSF2_ORYSJ (Cleavage and polyadenylation specificity factor subunit 2 OS=Oryza sativa subsp. japonica GN=Os09g0569400 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.362e-23
Identity = 80/287 (27.87%), Postives = 146/287 (50.87%), Query Frame = 3
Query:   15 HATKAIYKL-LLTDY-VLVSKVSVEDM-LFDEQDINRSMDRIEVLDFHQTVEVN----GIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQF-SPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIRNQFANS--NPFKFKHISPLNSIDDLSDVG--PSVVMASPGGLQSGLSRQLFDIWCSDKKNACVIPGYLVEGTLAKTIISEP 839
            +AT+ +++L +LT Y   +S+  V D  LF   DI+ +   +  L + Q   +N    GI    + AGH LG  ++ +   G  V+Y  D++  ++RHL    L  F  P + I ++   +  H  +  +++ F D +   ++ GG VL+P    GR  E+LLIL++YW+     +  PIY+ + ++   +   ++++  MN+ I   F ++  N F  K ++ + + D+L  +G  P VV+AS   L+ G S  +F    ++ KN  +       GTLA+ +  +P
Sbjct:   85 YATEPVFRLGILTLYDYFISRRQVSDFDLFTLDDIDAAFQNVVRLKYSQNHLLNDKGEGIVIAPHVAGHDLGGTVWKITKDGEDVVYAVDFNHRKERHLNGTALGSFVRPAVLITDAYNALNNHVYKRQQDQDFIDALVKVLTGGGSVLLPIDTAGRVLEILLILEQYWAQRHLIY--PIYFLTNVSTSTVDYVKSFLEWMNDSISKSFEHTRDNAFLLKCVTQIINKDELEKLGDAPKVVLASMASLEVGFSHDIFVDMANEAKNLVLFTEKGQFGTLARMLQVDP 369          
BLAST of DY258125 vs. ExPASy Swiss-Prot
Match: CPSF2_CAEEL (Probable cleavage and polyadenylation specificity factor subunit 2 OS=Caenorhabditis elegans GN=cpsf-2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.362e-23
Identity = 77/286 (26.92%), Postives = 145/286 (50.70%), Query Frame = 3
Query:   15 HATKAIYKL--LLTDYVLVSKVSVEDML-FDEQDINRSMDRIEVLDFHQTVEV---NGIKFWCYTAGHVLGAAMFMV-DIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNI-RERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPE-FHNIPIYYASPLAKKCMAVYQTYILSMNERIRNQFANS---NPFKFKHISPLNSIDDLSDV-GPSVVMASPGGLQSGLSRQLFDIWCSDKKNACVIPGYLVEGTLAKTIIS 833
            +AT  +YK+  +    ++ S + VE+   +   D++ + +++E + ++QTV +   +G+ F    AGH+LG +++ +  + G  ++Y  D++ +++RHL       F+    +I   + + L Q R   R+ +    I  T+ Q G  +I     GR  EL  +LD+ WSN         +   S +A   +   ++ +  MNE++    ++S   NPF  KH++  +S  +L  V  P VV+ S   ++SG SR+LF  WCSD +N  ++       TLA  +++
Sbjct:   85 YATVPVYKMGQMFIYDMVYSHLDVEEFEHYTLDDVDTAFEKVEQVKYNQTVVLKGDSGVHFTALPAGHMLGGSIWRICRVTGEDIVYCVDFNHKKERHLNGCSFDNFNRPHLLITGAHHISLPQMRRKDRDEQLVTKILRTVRQKGDCMIVIDTAGRVLELAHLLDQLWSNADAGLSTYNLVMMSHVASSVVQFAKSQLEWMNEKLFKYDSSSARYNPFTLKHVTLCHSHQELMRVRSPKVVLCSSQDMESGFSRELFLDWCSDPRNGVILTARPASFTLAAKLVN 370          
BLAST of DY258125 vs. ExPASy Swiss-Prot
Match: CPSF2_XENLA (Cleavage and polyadenylation specificity factor subunit 2 OS=Xenopus laevis GN=cpsf2 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 3.962e-23
Identity = 83/308 (26.95%), Postives = 152/308 (49.35%), Query Frame = 3
Query:   15 HATKAIYKL--LLTDYVLVSKVSVEDM-LFDEQDINRSMDRIEVLDFHQTVEV----NGIKFWCYTAGHVLGAAMFMVDIAGVR-VLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIR--ERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQ---TYILSMNERIRNQFAN--SNPFKFKHISPLNSIDDLSDV-GPSVVMASPGGLQSGLSRQLFDIWCSDKKNACVIPGYLVEGTLAKTIISEPKEVTLMNGLTAPLNMQG 890
            +AT  +YK+  +    +  S+ + ED  LF   D++ + D+I+ L ++Q V +    +G+      AGH++G  ++ +   G   ++Y  D++ + + HL    L   +    +I  ++     QPR  +  E+  T+V+  T+   G VLI     GR  EL  +LD+ W        + +Y  + L      V +   + +  M++++   F +  +NPF+F+H++  +   DL+ V  P VV+AS   L+ G SR+LF  WC D KN+ ++      GTLA+ +I  P E  +   L   + ++G
Sbjct:   85 YATIPVYKMGQMFMYDLYQSRHNTEDFSLFSLDDVDCAFDKIQQLKYNQIVHLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMINRPSLLITDSFNATYVQPRRKQRDEQLLTNVLE-TLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDA--GLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLTLCHGYSDLARVPSPKVVLASQPDLECGFSRELFIQWCQDPKNSVILTYRTTPGTLARFLIDHPSERIIDIELRKRVKLEG 389          
BLAST of DY258125 vs. ExPASy Swiss-Prot
Match: CPSF2_CAEBR (Probable cleavage and polyadenylation specificity factor subunit 2 OS=Caenorhabditis briggsae GN=cpsf-2 PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 4.380e-22
Identity = 72/285 (25.26%), Postives = 144/285 (50.53%), Query Frame = 3
Query:   15 HATKAIYKL--LLTDYVLVSKVSVEDML-FDEQDINRSMDRIEVLDFHQTVEV---NGIKFWCYTAGHVLGAAMFMV-DIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQ-PRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPE-FHNIPIYYASPLAKKCMAVYQTYILSMNERIRNQFANS---NPFKFKHISPLNSIDDLSDV-GPSVVMASPGGLQSGLSRQLFDIWCSDKKNACVIPGYLVEGTLAKTII 830
            + T  +YK+  +    ++ S + VE+   +   D++ + +++E + ++QTV +   +G+ F    AGH++G +M+ +  I G  ++Y  D++  +DRHL       F+    +I   + + L Q  R  R+ +    I  T+ Q G  +I     GR  EL  +LD+ W+N         +   S +A   +   ++ +  M+E++    ++S   NPF  K+++ ++S  +L  +  P VV+ S   +++G SR+LF  WC+D++N  ++       TLA  ++
Sbjct:   85 YCTVPVYKMGQMFIYDLVYSHLDVEEFQHYSLDDVDMAFEKVEQVKYNQTVVLKGDSGVNFTAMPAGHMIGGSMWRICRITGEDIIYCVDFNHRKDRHLSGCSFDNFNRPHLLITGAHHISLPQMKRKDRDEQLVTKILRTVRQKGDCMIVIDTAGRVLELAYLLDQLWANQDAGLSTYNLVMMSHVASSVVQFAKSQLEWMDEKLFRYDSSSARYNPFTLKNVNLVHSHLELIKIRSPKVVLCSSQDMETGFSRELFLDWCADQRNGVILTARPASFTLAARLV 369          
BLAST of DY258125 vs. ExPASy Swiss-Prot
Match: CPSF2_DICDI (Cleavage and polyadenylation specificity factor subunit 2 OS=Dictyostelium discoideum GN=cpsf2 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.708e-21
Identity = 73/271 (26.94%), Postives = 126/271 (46.49%), Query Frame = 3
Query:   63 VSKVSVEDMLFDEQDINRSMDRIEVLDFHQTVEVNG----IKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQ--FSPDICIIESTYGVQ---LHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKC--MAVYQTYILSMNERIRNQFANSNPFKFKHISPLNSIDDLSDVGPS--VVMASPGGLQSGLSRQLFDIWCSDKKNACVIPGYLVEGTLAKTIISE 836
            +S+   +    D  D     DR + L F Q   ++G    I    Y AGH +GA+++ +      ++Y  DY+   + HL + +L      P + I +S  GV      +    R++   + I+  +  GG VLIP    GR  ELLL ++ YWS +       + +    +      A  Q   +S    ++ +    NPF FKHI  L+S+++L ++  +  V++ S   L++G SR+LF  WCSD K   +    + + +LA  +I +
Sbjct:  106 MSQEEFQQYSLDNIDSCFGEDRFKELSFSQHYSLSGKGKGISITPYLAGHTIGASVWKITKGTYSIVYAIDYNHRNEGHLDSLQLTSDILKPSLLITDSK-GVDKTLAFKKTITRDQSLFEQINRNLRDGGNVLIPVDTAGRVLELLLCIENYWSKNKSLALYSVVFLGRFSFSVCQFARSQLEFMSSTASVKFEQNIENPFSFKHIKILSSLEELQELPDTNKVILTSSQDLETGFSRELFIQWCSDPKTLILFTQKIPKDSLADKLIKQ 375          
The following BLAST results are available for this feature:
BLAST of DY258125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
Y047_METJA9.429e-2526.14Uncharacterized protein MJ0047 OS=Methanocaldococc... [more]
CPSF2_HUMAN3.583e-2426.06Cleavage and polyadenylation specificity factor su... [more]
CPSF2_BOVIN3.583e-2427.92Cleavage and polyadenylation specificity factor su... [more]
CPSF2_MOUSE4.680e-2427.92Cleavage and polyadenylation specificity factor su... [more]
CPSF2_DROME4.680e-2428.68Probable cleavage and polyadenylation specificity ... [more]
CPSF2_ORYSJ1.362e-2327.87Cleavage and polyadenylation specificity factor su... [more]
CPSF2_CAEEL1.362e-2326.92Probable cleavage and polyadenylation specificity ... [more]
CPSF2_XENLA3.962e-2326.95Cleavage and polyadenylation specificity factor su... [more]
CPSF2_CAEBR4.380e-2225.26Probable cleavage and polyadenylation specificity ... [more]
CPSF2_DICDI3.708e-2126.94Cleavage and polyadenylation specificity factor su... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3AF08ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258125 ID=DY258125; Name=DY258125; organism=Citrus clementina; type=EST; length=1354bp
GGGTATTTATGACTCATGCTACAAAGGCTATTTACAAGTTGCTTTTGACT
GATTATGTATTAGTGAGCAAAGTTTCAGTTGAAGATATGTTGTTCGATGA
ACAAGACATTAATCGCTCCATGGATAGAATTGAGGTTCTTGATTTCCATC
AGACAGTGGAAGTGAATGGCATTAAATTCTGGTGTTATACCGCTGGCCAT
GTCCTGGGTGCTGCCATGTTTATGGTTGACATTGCTGGTGTTCGAGTACT
CTACACTGGAGATTATTCTCGTGAAGAAGACCGACATCTCCGTGCTGCTG
AGCTTCCTCAGTTCTCTCCTGACATTTGTATAATCGAATCCACTTATGGT
GTTCAGCTTCATCAACCACGGAACATTCGTGAGAGGCGCTTCACTGATGT
TATTCACTCAACTATTTCTCAAGGAGGTCGTGTTCTAATTCCGGCATATG
CCCTTGGCCGAGCCCAGGAGCTGCTGCTGATCCTTGATGAGTACTGGTCG
AACCATCCGGAGTTCCATAATATTCCAATTTATTATGCTTCTCCACTTGC
CAAAAAGTGCATGGCTGTTTATCAGACATACATCCTTTCCATGAATGAGA
GAATCCGCAACCAGTTTGCAAACTCAAATCCCTTCAAATTCAAGCACATT
TCGCCATTAAATAGCATTGATGACTTAAGTGATGTTGGCCCTTCAGTGGT
GATGGCAAGCCCGGGTGGGCTACAGAGTGGTTTGTCTAGACAATTATTTG
ATATTTGGTGCTCTGATAAGAAAAATGCTTGTGTCATACCAGGTTATCTT
GTTGAAGGAACATTGGCAAAAACCATAATTAGTGAACCAAAAGAAGTCAC
CCTTATGAATGGGCTCACCGCTCCTCTCAACATGCAGGGTCATTACATAT
CTTTCTCTGCACACGCAGACTATGCTCAGACAAGCACATTTTTAAAAGAG
CTCATGGCTCCTAACATAATTCTTGTTCATGGAGAATCTCATGAAAAGGG
GGAGGCTCAAAAACAAGCATATGACCCAATTACCTGACTGCAATCCAAAA
TTATAACCCCCAAGAACTGTCCGTCCCGTTGAAAGGGATTTAACTCCCAA
AAAAATGGAAAAAACCATTGGGAAGGGTGGGTGAAAAAAAGGCCCGAAAT
TTGGGGAAAAATGTCCCTGGGGCAATTTTTTTTAAAACAGGGGTTTCACT
TTTCCCAAAAAAAGGGGGCTCCCGGAGATAATTTTTCCACACCCTTTCCC
CCCCCCTTTTTATCAACACAAAAAAAAATATATCCCCAAAAAGAAATAAT
TACTACTCTCCCCCGCGCCTCCCACGGGCGCGGCCCCCCTTCTGGGTGTT
GGGG
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