DY258145

Overview
NameDY258145
Unique NameDY258145
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length819
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.984e-69
Identity = 132/227 (58.15%), Postives = 157/227 (69.16%), Query Frame = 1
Query:    4 GEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 684
            G GF+A+DITF+NTAGP   QAVALRV +D SAFY C +  YQDTLY HS RQF+ +C I GT+DFIFGN AAVLQNC I+ R P   QK  +TAQGR  PNQNTG VIQ S + AT          PTYLGRPWK YSRTV M + ++ L+ P GW EW GNFAL+TL+YGE+ N G G  +SGR KW G+ ++   T A +FT GSFI G  WL +TG  F+ GL
Sbjct:  325 GRGFIAKDITFRNTAGPQNRQAVALRVDSDQSAFYRCSVEGYQDTLYAHSLRQFYRDCEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPNQNTGFVIQNSYVLATQ---------PTYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPGYHIMDKRT-ALSFTVGSFIDGRRWLPATGVTFTAGL 541          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.796e-69
Identity = 126/224 (56.25%), Postives = 153/224 (68.30%), Query Frame = 1
Query:   13 FLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 684
            F+A +ITF+NTAGP KHQAVALR GAD S FY+C   AYQDTLY HS RQF+  C + GTVDFIFGNAA V QNC+++ RKP   Q N +TAQGR+DPNQNTG  IQ   I    DL     +  TYLGRPWKEYSRTV MQS I   + P GW EW+G+FAL+TL+Y E+ N+G G+ T+ R  W G+ VI S T+A  FT       + W+  TG P++ GL
Sbjct:  355 FVAVNITFRNTAGPEKHQAVALRSGADFSIFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVFQNCNLYPRKPMPNQFNAITAQGRSDPNQNTGTSIQNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVINS-TDAANFTVTGLFIEADWIWKTGVPYTSGL 577          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.796e-69
Identity = 129/228 (56.58%), Postives = 157/228 (68.86%), Query Frame = 1
Query:    1 VGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 684
            VG+ F+A D+TF+NTAGP KHQAVA+R  AD S FY C    YQDTLYVHS RQF+  C I GT+DFIFGNAAA+ QNC+I+ARKP + QKN VTA GRTDPNQ TGI I    IGA  DL     S  T+LGRPWK YSRTV +QS I+D++ P GW EW+G   L+T+ YGE+ N G GA TS R +W G+ ++ +  +A  FT  +F  G +WL  T  PF  GL
Sbjct:  394 VGDRFVAVDVTFRNTAGPEKHQAVAVRNNADGSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIYARKPMANQKNAVTAHGRTDPNQKTGISIINCTIGAAPDLAADPKSTMTFLGRPWKPYSRTVYIQSYISDVVQPVGWLEWNGTTGLDTISYGEYDNFGPGADTSKRVQWSGYSLL-NLVQAMNFTVYNFTLGDTWLPQTDIPFYGGL 620          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 4.405e-68
Identity = 131/227 (57.71%), Postives = 155/227 (68.28%), Query Frame = 1
Query:    4 GEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 684
            G+GF+ARD+ F NTAGPSKHQAVAL V ADL+AFY C M AYQDTLYVH+ RQF+  C I GTVDFIFGN+A+VLQ+C I  R+P  GQ+N +TAQGRTDPN NTGI I +  I    DL  V     T+LGRPWK +S TVIM S +   I   GW  W G+ A +T+FYGE++N+G GA T  R KWKG R + S  EA  FT   FI G  WL +T  PF  GL
Sbjct:  340 GKGFMARDMGFINTAGPSKHQAVALMVSADLTAFYRCTMNAYQDTLYVHAQRQFYRECTIIGTVDFIFGNSASVLQSCRILPRRPMKGQQNTITAQGRTDPNMNTGISIHRCNISPLGDLTDVM----TFLGRPWKNFSTTVIMDSYLHGFIDRKGWLPWTGDSAPDTIFYGEYKNTGPGASTKNRVKWKGLRFL-STKEANRFTVKPFIDGGRWLPATKVPFRSGL 561          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.753e-68
Identity = 128/227 (56.39%), Postives = 156/227 (68.72%), Query Frame = 1
Query:    4 GEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 684
            G+GF+ RDIT +NTAGP  HQAVALR  +D+S FY C +  YQDTLYVHS RQFF  C I GTVDFIFGNAAAVLQNC I AR P +G  N +TAQ R +PNQ TGIVI  S +     ++L  G   TYLGRPW+ Y+RTV++ + +  LI P GW +WD   AL+TL+YGE+QNSG G+GT  R  W GF VI+   EA+ FT   FI  +SWL  T  PF++ L
Sbjct:  251 GDGFVGRDITIRNTAGPENHQAVALRSNSDMSVFYRCSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNPPNG-VNTITAQSRFNPNQTTGIVIHNSVVKGAPGVQL--GGVKTYLGRPWRSYARTVVIGTYLDTLIEPNGWIDWDNVTALSTLYYGEYQNSGPGSGTENRVDWAGFHVISDIQEAREFTLPKFIDSASWLPPTKVPFTINL 474          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.753e-68
Identity = 131/228 (57.46%), Postives = 155/228 (67.98%), Query Frame = 1
Query:    1 VGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 684
            +G+GF+ARDITF N+AGP+  QAVALRVG+D S  Y C +  YQD+LY  S RQF+    I GTVDFIFGN+A V Q+C++ +RK +S Q N VTAQGR+DPNQNTGI I   RI          GS  TYLGRPWK+YSRTV+MQS I   IHP+GW  W  NFAL TL+YGE  NSG G+  SGR  W G+    + TEAQ FT   FI G+SWL STG  F  GL
Sbjct:  311 MGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDGYQDSLYTLSKRQFYRETDITGTVDFIFGNSAVVFQSCNLVSRKGSSDQ-NYVTAQGRSDPNQNTGISIHNCRI---------TGSTKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEFGNSGPGSSVSGRVSWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSGL 528          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.157e-66
Identity = 122/224 (54.46%), Postives = 155/224 (69.20%), Query Frame = 1
Query:    4 GEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 675
            G+GF+ARD+ F NTAGP+KHQAVAL V ADLS FY C M A+QDT+Y H+ RQF+ +C+I GTVDFIFGNAA V Q C+I  R+P  GQ+N +TAQGR DPNQNTGI I    I    +L  +Q    T+LGRPWK++S TVIM+S +   I+P GW  W G+ A +T+FY E+ NSG GA T  R KW+G +   +  EA  FT   FI G++WL +T  PF+
Sbjct:  342 GKGFMARDMGFINTAGPAKHQAVALMVSADLSVFYKCTMDAFQDTMYAHAQRQFYRDCVILGTVDFIFGNAAVVFQKCEILPRRPMKGQQNTITAQGRKDPNQNTGISIHNCTIKPLDNLTDIQ----TFLGRPWKDFSTTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEYLNSGPGASTKNRVKWQGLKTSLTKKEANKFTVKPFIDGNNWLPATKVPFN 561          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.559e-65
Identity = 123/226 (54.42%), Postives = 153/226 (67.70%), Query Frame = 1
Query:    4 GEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW--DGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 675
            G  F+A+ I FQNTAGP+K QAVALR  +DLS FY C +  YQDTL VHS RQF+  C I GTVDFIFGNAA V QNC I  R P  GQ N++TAQGRTD  QNTGI I  S I    DLK V  S  TY+GRPW  YSRTV++++ I  ++ P GW  W     + L+TLFY E++N G  + T  R +WKGF V++ A++A AF+ G FIAG++WL  +G PF+
Sbjct:  312 GLHFIAKGIAFQNTAGPAKGQAVALRSSSDLSIFYRCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAVVFQNCIILPRLPLKGQANVITAQGRTDLFQNTGISIHNSIIIPAPDLKPVVRSVKTYMGRPWMMYSRTVVLKTYIDSVVSPVGWSPWTKGSTYGLDTLFYAEYKNIGPASSTRWRVRWKGFHVLSKASDASAFSVGKFIAGTAWLPGSGIPFT 537          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.016e-64
Identity = 116/223 (52.02%), Postives = 155/223 (69.51%), Query Frame = 1
Query:    4 GEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPF 672
            G+ F A++I F+NTAGP  HQAVALRV ADL+ FYNC +  YQDTLYVHS+RQFF +C ++GTVDFIFG+   VLQNC+I  RKP   Q  M+TAQGR+D  ++TG+V+Q   I        V+     YLGRPWKE+SRT+IM ++I D+I PAGW  W+G+FALNTL+Y E++N+G G+  + R KW G + + S  +A  FTP  F+ G+ W+     P+
Sbjct:  345 GDNFTAKNIGFENTAGPEGHQAVALRVSADLAVFYNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDGIVVLQNCNIVVRKPMKSQSCMITAQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGIKKL-SPKQALRFTPARFLRGNLWIPPNRVPY 566          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.016e-64
Identity = 114/224 (50.89%), Postives = 158/224 (70.54%), Query Frame = 1
Query:    4 GEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 675
            G+ F+A+DI F+NTAG ++HQAVALRV AD + F+NC M  YQDTLYVH++RQF+ NC ++GT+DF+FG+A AV QNC+   R+P   Q+ +VTAQGR D  + TGIVI  SRI   +    V+     +LGRPWKE+SRT+IM + I D+I P GW +W+  FALNTLFY E++N G G+G   R +W+G + I S   A+ F PG+F+ G++W+  T  P++
Sbjct:  477 GDYFMAKDIGFENTAGAARHQAVALRVSADFAVFFNCHMNGYQDTLYVHTHRQFYRNCRVSGTIDFVFGDAKAVFQNCEFVIRRPMEHQQCIVTAQGRKDRRETTGIVIHNSRITGDASYLPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRI-SDRAAREFAPGNFLRGNTWIPQTRIPYN 699          
The following BLAST results are available for this feature:
BLAST of DY258145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME22_ARATH3.984e-6958.15Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME7_ARATH6.796e-6956.25Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME47_ARATH6.796e-6956.58Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME24_ARATH4.405e-6857.71Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME38_ARATH5.753e-6856.39Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME35_ARATH5.753e-6857.46Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME46_ARATH3.157e-6654.46Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME60_ARATH4.559e-6554.42Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME58_ARATH1.016e-6452.02Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME43_ARATH1.016e-6450.89Putative pectinesterase/pectinesterase inhibitor 4... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BB02ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258145 ID=DY258145; Name=DY258145; organism=Citrus clementina; type=EST; length=819bp
GTTGGTGAAGGATTCTTGGCCCGAGACATTACATTCCAAAACACAGCAGG
CCCCTCAAAGCACCAGGCAGTGGCACTGCGAGTGGGAGCTGACCTTTCAG
CATTTTACAATTGCGATATGTTAGCTTACCAAGACACACTCTACGTCCAC
TCGAACCGCCAGTTCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATTT
CATTTTTGGTAATGCTGCAGCCGTGTTACAAAATTGTGACATCCATGCAC
GAAAGCCCAATTCCGGCCAAAAAAATATGGTCACAGCCCAAGGCAGGACT
GACCCTAACCAAAACACCGGCATTGTCATTCAAAAATCTAGGATTGGTGC
CACCTCCGATTTAAAACTGGTTCAGGGTAGTTTCCCGACGTACCTCGGCA
GGCCCTGGAAGGAGTACTCGAGGACGGTGATCATGCAGTCGTCGATTACT
GACTTGATCCACCCTGCCGGGTGGCACGAGTGGGATGGTAACTTCGCGTT
GAACACATTGTTTTACGGAGAGCATCAGAACAGCGGAGCCGGTGCCGGAA
CTTCAGGGAGAGCGAAATGGAAGGGATTTAGGGTTATTACAAGTGCTACC
GAGGCTCAAGCTTTTACTCCTGGAAGCTTCATTGCTGGTAGTAGCTGGCT
GGGCTCCACTGGTTTCCCATTCTCCCTTGGTTTGTAATATTCACTAGGAG
TTTTAATTAATATGTTTTGTATTAGTGGATCCATCGATCTCGGGTCTTTC
AATTTGTAATATTTGATTGAGCGTGTCTTATTCGTGGCTTCAATCTCACA
AATACTATTGTGTGATTTA
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