DY258145

Overview
NameDY258145
Unique NameDY258145
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length819
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 9.207e-58
Identity = 110/227 (48.46%), Postives = 139/227 (61.23%), Query Frame = 1
Query:    4 GEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 684
            G GF+  D+ F+NTAGP+K  AVALRV  D+S  Y C +  YQD LY HS+RQF+  C I GTVDFI GNA AV Q C I AR+P  GQ N++TAQ R   +  +G  IQ   I  +SDL     +  TYLGRPW+ +S   ++QS I DL+ PAGW  W G   L+TL Y E+QN G GA TS R KW GF+V+    +A  FT    + G +WL  +  P+  GL
Sbjct:  273 GNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRATKDVKSGFSIQNCNITTSSDLD--TATVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGETWLKESRIPYESGL 497          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.868e-56
Identity = 104/221 (47.06%), Postives = 146/221 (66.06%), Query Frame = 1
Query:    4 GEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW-DGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTG 663
            G+GF+ +DI   NTAG +KHQAVA R G+D S +Y C    +QDTLY HSNRQF+ +C + GT+DFIFG+AA V Q C I  R+P S Q N +TAQG+ DPNQ++G+ IQ+  I A  ++       PTYLGRPWKE+S TVIM++ I  ++ P+GW  W  G     ++ YGE++N+G G+  + R KW G++ + S  EA  FT  + + G+ W+ +TG
Sbjct:  365 GKGFIMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISANGNV-----IAPTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATG 580          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.065e-53
Identity = 107/224 (47.77%), Postives = 136/224 (60.71%), Query Frame = 1
Query:    1 VGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDI----HARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSD-LKLVQGS---FPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSW 648
            VG+GF+ARD+TFQNTAGP  HQAVA R  +D S   NC+ L  QDTLY H  RQF+ NC I G VDFIFGN+AAV Q+C+I        P  G+KN VTAQGR DP+Q+TG V     I  T + +KL + +      +LGRPWK+YSRTV +  ++  LI P GW  W G+FAL TL+YGE +N+G G+  S R  W              ++  +FI    W
Sbjct:  326 VGDGFMARDLTFQNTAGPDAHQAVAFRSDSDFSLIENCEFLGNQDTLYAHGLRQFYKNCRIQGNVDFIFGNSAAVFQDCEILIAPRQINPEKGEKNAVTAQGRIDPSQSTGFVFLNCLINGTEEYMKLFKANPKVHKNFLGRPWKDYSRTVFIGCNLEALITPDGWLPWSGDFALKTLYYGESKNTGPGSDRSQRVSWSS---QIPDEHVHVYSVANFIQADEW 546          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.987e-52
Identity = 103/219 (47.03%), Postives = 136/219 (62.10%), Query Frame = 1
Query:    4 GEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNF--ALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAG-SSWL 651
            G+GF+ +D+   NTAGP KHQAVA R  +D S +Y C    YQDTLY HSNRQ++ NC + GTVDFIFG    V Q C I  R+P   Q N +TA+G  + NQNTGI I +  I    ++     +  TYLGRPWK +S+TVIMQS I   ++PAGW  W+  +     T+FY E++NSG G+  S R KW G++ I+S  EA  FT   F+ G  +W+
Sbjct:  745 GKGFMMKDMGIINTAGPEKHQAVAFRSDSDRSVYYRCSFDGYQDTLYTHSNRQYYRNCDVTGTVDFIFGAGTVVFQGCSIRPRQPLPNQFNTITAEGTQEANQNTGISIHQCTISPNGNV-----TATTYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRGDDNWI 958          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.196e-51
Identity = 107/232 (46.12%), Postives = 139/232 (59.91%), Query Frame = 1
Query:    4 GEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFI------AGSSWLGSTGFPFSLG 681
            G  F+A+DI F+NTAG  KHQAVALRV AD + FYNC M  +QDTLYV S RQF+ +C I+GT+DF+FG    V QNC +  R P  GQ+ +VTA GR   N  + +V Q S       L  V     +YLGRPWK+YS+ VIM S+I  +  P G+  W G+    T  Y E+ N G GA T+ R KW G +V+TS   A+ + PG F       A  +W+  +G P+SLG
Sbjct:  216 GANFMAKDIGFENTAGTGKHQAVALRVTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKV-SYLGRPWKQYSKVVIMDSTIDAIFVPEGYMPWMGSAFKETCTYYEYNNKGPGADTNLRVKWHGVKVLTSNVAAE-YYPGKFFEIVNATARDTWIVKSGVPYSLG 445          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.424e-50
Identity = 101/229 (44.10%), Postives = 135/229 (58.95%), Query Frame = 1
Query:    1 VGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDI-----HARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSD-LKLVQGS---FPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGST 660
            +G+GF+ARD+T +NTAG   HQAVA R  +D S   NC+ L  QDTLY HS RQF+  C I G VDFIFGN+AAV Q+CDI     H++    G  N +TA GR D +Q+TG V     I  T + +K  Q +      +LGRPWKE+SRTV +  ++  LI P GW  W+G+FAL TL+YGE++N+G G+  S R  W              ++  +FI    W  +T
Sbjct:  376 LGDGFMARDLTIENTAGADAHQAVAFRSDSDFSVLENCEFLGNQDTLYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCDILIASKHSKLEQGGANNAITAHGRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWNGDFALKTLYYGEYKNTGPGSVRSSRVPWSS---EIPEKHVDVYSVANFIQADEWASTT 601          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.580e-49
Identity = 96/198 (48.48%), Postives = 127/198 (64.14%), Query Frame = 1
Query:    4 GEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK-NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW--DGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVI 588
            G+GF+ARDI  +N AGP  HQA+AL + +D S  Y C +  YQDTLY  + RQF+  C I GT+DFIFGNAAAV Q+C+I  R+P+  +  N++ A GRTD  QNTG  +   RI   SDL  V+  + +YLGRPW++YSR ++M+S I D I   GW  W   G+  L TL++GE +N G  A  S R  W+GF  I
Sbjct:  282 GDGFIARDIGIKNIAGPRGHQAIALSITSDQSVLYRCSISGYQDTLYAAALRQFYRECDIYGTIDFIFGNAAAVFQSCNIFLRRPHGVKAYNVILANGRTDQRQNTGFALHSCRIRTDSDLSPVKHKYSSYLGRPWRKYSRAIVMESYIDDAIAEGGWAGWLDSGDEVLKTLYFGEFKNYGPKARISKRVTWEGFHSI 479          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.064e-48
Identity = 100/227 (44.05%), Postives = 135/227 (59.47%), Query Frame = 1
Query:    7 EGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQ-NTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 684
            EGF+A+ I FQNTAGP  HQAVA RV  D +  +NC    YQDTLYV++ RQF+ N +++GTVDFIFG +A V+QN  I  RK + GQ N VTA G         GIV+   RI A  +L+  + +  +YLGRPWK ++ T ++ + I DLI P GW+EW G     T  Y E  N G GA T+ R  W   ++  SA E + FT  +++  ++W+     P  LGL
Sbjct:  360 EGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVPVQLGL 584          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.064e-48
Identity = 100/227 (44.05%), Postives = 134/227 (59.03%), Query Frame = 1
Query:    7 EGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQG-RTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 684
            EGF+A+ + F+NTAGP  HQA A+RV  D +  +NC    YQDTLYV++ RQF+ NC+++GTVDFIFG +A V+QN  I  RK + GQ N VTA G         GIV+Q  RI     L   + +  TYLGRPWK++S TVIM + + DLI P GW  WDG     +  Y E+ N G GA  + R  W   +V  SA E   FT  +++   +W+     P ++GL
Sbjct:  364 EGFMAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNRGPGAFANRRVNWA--KVARSAAEVNGFTAANWLGPINWIQEANVPVTIGL 588          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 6.613e-48
Identity = 101/227 (44.49%), Postives = 136/227 (59.91%), Query Frame = 1
Query:    7 EGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQG-RTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 684
            EGF+A+ I F+NTAGP  HQAVALRV  D +  +NC    YQDTLYV++ RQF+ N +++GTVDFIFG +A V+QN  I  RK + GQ N VTA G         GIV+   RI    +L+  + +  +YLGRPWK+++ TVI+ + I DLI P GW EW G     T  Y E  N G GA T+ R  W   +V  SA E + +T  +++  ++W+     P  LGL
Sbjct:  364 EGFMAKWIGFKNTAGPLGHQAVALRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTADGNEKGAAMKIGIVLHNCRIIPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPW--VKVAKSAAEVETYTVANWVGPANWIQEANVPVQLGL 588          
The following BLAST results are available for this feature:
BLAST of DY258145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME30_ARATH9.207e-5848.46Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PME1_ARATH3.868e-5647.06Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME51_ARATH3.065e-5347.77Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME26_ARATH1.987e-5247.03Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME_MEDSA2.196e-5146.12Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME64_ARATH1.424e-5044.10Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME54_ARATH4.580e-4948.48Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME_BRANA5.064e-4844.05Probable pectinesterase/pectinesterase inhibitor O... [more]
PME4_ARATH5.064e-4844.05Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]
PME37_ARATH6.613e-4844.49Probable pectinesterase/pectinesterase inhibitor V... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BB02ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258145 ID=DY258145; Name=DY258145; organism=Citrus clementina; type=EST; length=819bp
GTTGGTGAAGGATTCTTGGCCCGAGACATTACATTCCAAAACACAGCAGG
CCCCTCAAAGCACCAGGCAGTGGCACTGCGAGTGGGAGCTGACCTTTCAG
CATTTTACAATTGCGATATGTTAGCTTACCAAGACACACTCTACGTCCAC
TCGAACCGCCAGTTCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATTT
CATTTTTGGTAATGCTGCAGCCGTGTTACAAAATTGTGACATCCATGCAC
GAAAGCCCAATTCCGGCCAAAAAAATATGGTCACAGCCCAAGGCAGGACT
GACCCTAACCAAAACACCGGCATTGTCATTCAAAAATCTAGGATTGGTGC
CACCTCCGATTTAAAACTGGTTCAGGGTAGTTTCCCGACGTACCTCGGCA
GGCCCTGGAAGGAGTACTCGAGGACGGTGATCATGCAGTCGTCGATTACT
GACTTGATCCACCCTGCCGGGTGGCACGAGTGGGATGGTAACTTCGCGTT
GAACACATTGTTTTACGGAGAGCATCAGAACAGCGGAGCCGGTGCCGGAA
CTTCAGGGAGAGCGAAATGGAAGGGATTTAGGGTTATTACAAGTGCTACC
GAGGCTCAAGCTTTTACTCCTGGAAGCTTCATTGCTGGTAGTAGCTGGCT
GGGCTCCACTGGTTTCCCATTCTCCCTTGGTTTGTAATATTCACTAGGAG
TTTTAATTAATATGTTTTGTATTAGTGGATCCATCGATCTCGGGTCTTTC
AATTTGTAATATTTGATTGAGCGTGTCTTATTCGTGGCTTCAATCTCACA
AATACTATTGTGTGATTTA
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