DY258145

Overview
NameDY258145
Unique NameDY258145
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length819
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME_ASPAC (Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.000e-28
Identity = 71/178 (39.89%), Postives = 101/178 (56.74%), Query Frame = 1
Query:   25 DITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFG-NAAAVLQNCDIH-ARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLF--YGEHQNSGAGA 546
            ++   NT G + HQA+AL   AD   +Y C+   YQDTL   +  Q ++N  I G VDFIFG +A A  QN DI     P S     +TA GR+     +  VI KS + A     + +G++  YLGRPW EY+R V  Q+S+T++I+  GW EW  +   NT +  +GE+ N+GAG+
Sbjct:  126 NLNIANTCGQACHQALALSAWADQQGYYGCNFTGYQDTLLAQTGNQLYINSYIEGAVDFIFGQHARAWFQNVDIRVVEGPTSAS---ITANGRSSETDTSYYVINKSTVAAKEGDDVAEGTY--YLGRPWSEYARVVFQQTSMTNVINSLGWTEWSTS-TPNTEYVTFGEYANTGAGS 297          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.602e-28
Identity = 80/228 (35.09%), Postives = 108/228 (47.37%), Query Frame = 1
Query:    1 VGEGFLARDITFQNTAG-PSKHQ--------AVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHAR--KPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWL 651
            + +  + + ITF N+   PS  +        AVA  +G D SAFY+      QDTL+    R +F  C I G VDFI G+  ++ Q+C I     +   G    +TAQGRT+ N   G V             LV G    YLGR W+ YSR +   S++TD++ P GW EW+       L Y EH   G+G+ TS RAKW       SA+  Q     SFI    W+
Sbjct:  108 LADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINC---------LVHGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEHGCFGSGSNTSRRAKWV---KKLSASAVQHLADLSFINRGGWV 323          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.927e-27
Identity = 78/234 (33.33%), Postives = 108/234 (46.15%), Query Frame = 1
Query:    1 VGEGFLARDITFQNTAG-PSKHQ--------AVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHAR--KPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFP 669
            + +  + + ITF N+   PSK +        AVA  +G D SAFY+      QDTL+    R +F  C I G VDFIFG   ++ Q+C I     +   G    +TAQGRT+P    G +             LV G+   +LGRPW+ YSR +   S++TD++ P GW  W+     N L + EH   G+GA    R KW       S +  Q     SFI    W+     P
Sbjct:  113 LADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINC---------LVYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKWV---KKLSESAIQNLADLSFINRGGWVEDLPIP 334          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 8.405e-27
Identity = 68/200 (34.00%), Postives = 101/200 (50.50%), Query Frame = 1
Query:   67 AVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK---NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGS 657
            AVA+ V  D SAFYNCD L  QDT++ +  R  F NC I G +DFIFG+  +V ++C I+A       K     +TAQGR+  +  +G V  +           V GS   YLGR +  +SR + +Q+ ++ ++HP GW+ W       +  Y E +  GAG+  S R  W     + S    Q F+  +FI    W+ +
Sbjct:  101 AVAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRGS---------VSGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRRVPW--IDKLHSFYTKQQFSISNFIDQDQWISN 289          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.289e-24
Identity = 71/219 (32.42%), Postives = 100/219 (45.66%), Query Frame = 1
Query:   13 FLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWD-GNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWL 651
            F AR+I+F NTA     G    QAVA R+  D + F  C     QDTL   + R +F  C I G++DFIFGN  ++ ++C++H+     G    + A GRT P + TG      R         V G+ P Y+GR   +YSR V   +    L+   GW +WD  +    T F+G +   G GA  +    W           A  F   SF+ G  W+
Sbjct:  154 FTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIASRFGS---IAAHGRTCPEEKTGFAFVGCR---------VTGTGPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYGPGAAATRGVSWAR---ALDYESAHPFIAKSFVNGRHWI 357          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME_ASPTU (Pectinesterase OS=Aspergillus tubingensis GN=pme1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.989e-24
Identity = 72/217 (33.18%), Postives = 109/217 (50.23%), Query Frame = 1
Query:    7 EGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFG-NAAAVLQNCDIHARK-PNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFA-LNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSW 648
            EG    ++   NT G + HQA+A+   A    +Y C    YQDTL   +  Q +    I G VDFIFG +A A    CDI   + P+S     +TA GR+  + ++  VI KS + A     +  G++  YLGRPW +Y+R    ++S+TD+I+  GW EW  +      + + E+ N+G GA        +G R   S+   +  T  S++ GS W
Sbjct:  119 EGSAIYNLNIANTCGQACHQALAVSAYASEQGYYACQFTGYQDTLLAETGYQVYAGTYIEGAVDFIFGQHARAWFHECDIRVLEGPSSAS---ITANGRSSESDDSYYVIHKSTVAAADGNDVSSGTY--YLGRPWSQYARVCFQKTSMTDVINHLGWTEWSTSTPNTENVTFVEYGNTGTGA--------EGPRANFSSELTEPITI-SWLLGSDW 321          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.698e-24
Identity = 71/219 (32.42%), Postives = 105/219 (47.95%), Query Frame = 1
Query:    7 EGFLARDITFQNTAGP----SKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWL 651
            E F A  +T +NTA      S+ QA+A+R+ AD +AFY+C    +QDTL       FF +C I GT DFIFG  A++  N  +HA     G + ++TAQGR    +  G      ++  T            YLGR W  + + V   + +T +++P+GW E        T+FYGE++  G G+    R     +       E   F    +I GS+WL
Sbjct:  151 EYFQAAHLTIKNTAPMPKPGSQGQALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHA--VGDGLR-VITAQGRQSATEQNGYTFVHCKVTGTGT--------GIYLGRSWMSHPKVVYAFTEMTSVVNPSGWRENLNRGYDKTVFYGEYKCFGPGSHLEKRVP---YTQDIDKNEVTPFLTLGYIKGSTWL 355          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.616e-23
Identity = 67/219 (30.59%), Postives = 108/219 (49.32%), Query Frame = 1
Query:   13 FLARDITFQNTAG-----PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK-NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWL 651
            F+A  I+ +N A       S++Q+VA  V AD  AFY+C   +  +TL+ +  R ++  C I G++DFIFG A ++  NC+I        +    +TA  R    + TG V  + +         V G    YLGR    YSR +  ++ ++  + P GW  W  + +   L++GE++  G GA    R+ W   + +T   E ++F    FI G+SWL
Sbjct:  130 FVAFGISIRNDAPVGMAFTSENQSVAAFVAADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKPYGSITAHHRESAEEKTGYVFIRGK---------VYGIDEVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNWSYHGSTQNLYHGEYKCHGPGAERQKRSDWA--KDLTK-QEVESFLSIDFIDGTSWL 336          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.256e-22
Identity = 72/226 (31.86%), Postives = 101/226 (44.69%), Query Frame = 1
Query:   28 ITFQN------TAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARK---PNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQA--FTPGSFIAGSSWLGSTGFPF 672
            ITF+N      ++ P+K    A+ +G D  A  +     +QDTLY    R ++  C+I+G +DFIFG A ++ + C +  R    P +     +TAQGR  P    G V +            V GS    LGR WK YSR +  +S  +D I P GW  W        + + E   +G GA TS R  W     +T A+E     FT  +FI    WL      F
Sbjct:  129 ITFKNKYNIASSSSPTKPAVAAMMLG-DKYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFKDCT---------VMGSGKALLGRAWKSYSRVIFYRSMFSDNILPIGWDAWKAKGQEGHITFVEFGCTGVGADTSKRVPW-----LTKASEKDVLQFTNLTFIDEEGWLSRLPIKF 339          
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.040e-21
Identity = 67/217 (30.88%), Postives = 98/217 (45.16%), Query Frame = 1
Query:   13 FLARDITFQNTAGPSKH----QAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWL 651
            FLA ++   NT+   K     QA+A+R+  D +AFYNC    +QDTL       FF NC I GT DFIFG  A++     +HA     G + ++ A  R    +  G      ++               YLGR W  + + V   + ++ +++P+GW E        T+FYGE+  +G G   S +AK           EA  F    +I GS WL
Sbjct:  153 FLAANLNIINTSPMPKPGTQGQALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQLHA--VGDGLR-VIAAHNRQSTTEQNGYSFVHCKVTGVGT--------GIYLGRAWMSHPKVVYSYTEMSSVVNPSGWQENRVRAHDKTVFYGEYMCTGPG---SHKAKRVAHTQDIDNKEASQFLTLGYIKGSKWL 355          
The following BLAST results are available for this feature:
BLAST of DY258145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME_ASPAC2.000e-2839.89Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE... [more]
PME55_ARATH7.602e-2835.09Probable pectinesterase 55 OS=Arabidopsis thaliana... [more]
PME29_ARATH4.927e-2733.33Probable pectinesterase 29 OS=Arabidopsis thaliana... [more]
PME52_ARATH8.405e-2734.00Putative pectinesterase 52 OS=Arabidopsis thaliana... [more]
PME68_ARATH2.289e-2432.42Probable pectinesterase 68 OS=Arabidopsis thaliana... [more]
PME_ASPTU2.989e-2433.18Pectinesterase OS=Aspergillus tubingensis GN=pme1 ... [more]
PME50_ARATH8.698e-2432.42Probable pectinesterase 50 OS=Arabidopsis thaliana... [more]
PME67_ARATH9.616e-2330.59Probable pectinesterase 67 OS=Arabidopsis thaliana... [more]
PME10_ARATH1.256e-2231.86Putative pectinesterase 10 OS=Arabidopsis thaliana... [more]
PME49_ARATH4.040e-2130.88Probable pectinesterase 49 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BB02ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258145 ID=DY258145; Name=DY258145; organism=Citrus clementina; type=EST; length=819bp
GTTGGTGAAGGATTCTTGGCCCGAGACATTACATTCCAAAACACAGCAGG
CCCCTCAAAGCACCAGGCAGTGGCACTGCGAGTGGGAGCTGACCTTTCAG
CATTTTACAATTGCGATATGTTAGCTTACCAAGACACACTCTACGTCCAC
TCGAACCGCCAGTTCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATTT
CATTTTTGGTAATGCTGCAGCCGTGTTACAAAATTGTGACATCCATGCAC
GAAAGCCCAATTCCGGCCAAAAAAATATGGTCACAGCCCAAGGCAGGACT
GACCCTAACCAAAACACCGGCATTGTCATTCAAAAATCTAGGATTGGTGC
CACCTCCGATTTAAAACTGGTTCAGGGTAGTTTCCCGACGTACCTCGGCA
GGCCCTGGAAGGAGTACTCGAGGACGGTGATCATGCAGTCGTCGATTACT
GACTTGATCCACCCTGCCGGGTGGCACGAGTGGGATGGTAACTTCGCGTT
GAACACATTGTTTTACGGAGAGCATCAGAACAGCGGAGCCGGTGCCGGAA
CTTCAGGGAGAGCGAAATGGAAGGGATTTAGGGTTATTACAAGTGCTACC
GAGGCTCAAGCTTTTACTCCTGGAAGCTTCATTGCTGGTAGTAGCTGGCT
GGGCTCCACTGGTTTCCCATTCTCCCTTGGTTTGTAATATTCACTAGGAG
TTTTAATTAATATGTTTTGTATTAGTGGATCCATCGATCTCGGGTCTTTC
AATTTGTAATATTTGATTGAGCGTGTCTTATTCGTGGCTTCAATCTCACA
AATACTATTGTGTGATTTA
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