DY258145
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.176e-20 Identity = 64/218 (29.36%), Postives = 101/218 (46.33%), Query Frame = 1 Query: 13 FLARDITFQNTA----GPSKH-QAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWL 651 F+A +I +NTA G +K QA+++R+ + +AFYNC +QDT+ + FF +C + GT DFIFG+ ++ +H ++ A + +G ++ T YLGR W + + V + +T +++P GW E T+FYGE++ SG G S +AK F EA F +I GS WL Sbjct: 152 FMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGI---RVIAAHAGKSAEEKSGYSFVHCKVTGTGG--------GIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYKCSGPG---SHKAKRVPFTQDIDDKEANCFLSLGYIQGSKWL 355
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.535e-20 Identity = 64/218 (29.36%), Postives = 101/218 (46.33%), Query Frame = 1 Query: 13 FLARDITFQNTA----GPSKH-QAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWL 651 F+A +I +NTA G +K QA+++R+ + +AFYNC +QDT+ + FF +C + GT DFIFG+ ++ +H ++ A + +G ++ T YLGR W + + V + +T +++P GW E T+FYGE++ SG G S +AK F EA F +I GS WL Sbjct: 152 FMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGI---RVIAAHAGKSAEEKSGYSFVHCKVTGTGG--------GIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYKCSGPG---SHKAKRVPFTQDIDDKEANRFLSLGYIQGSKWL 355
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 4.939e-19 Identity = 62/218 (28.44%), Postives = 103/218 (47.25%), Query Frame = 1 Query: 13 FLARDITFQNTA----GPSKH-QAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWL 651 F+A +I +N+A G K QA+++R+ + +AFYNC YQDT+ + FF +C I GT DFIFG+ ++ ++ ++TA + +G ++ T YLGR W + + V + ++ +++P+GW E T+FYGE++ +G G+ R K + EA+ F +I GSSWL Sbjct: 129 FMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNVVGDGI---RVITAHAGKSAAEKSGYSFVHCKVTGTGT--------GIYLGRSWMSHPKVVYAYTDMSSVVNPSGWQENREAGRDKTVFYGEYKCTGTGSHKEKRVK---YTQDIDDIEAKYFISLGYIQGSSWL 332
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.030e-16 Identity = 66/227 (29.07%), Postives = 97/227 (42.73%), Query Frame = 1 Query: 28 ITFQNTAG--PSKHQ----AVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKN---MVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRAKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLG 681 ITF+NT P+ + AVA R+ D + + QDTL+ R ++ C+I+G +DFIFG ++ + C ++ N +TA R P+ G V V G T LGR W +R + +S ++D++ P GW W L + E +GAGA TS R W S +E F SFI W+ + FP G Sbjct: 123 ITFKNTYNIVPNNKREIVPAVAARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDCT---------VTGVGKTLLGRAWGSNARVIFDRSRLSDVVLPIGWDAWRAKGNERDLTFVEAGCTGAGADTSQRVPW---LKKLSLSEVDGFASVSFIDQDGWI--SRFPIEGG 335
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PMEA_ERWCH (Pectinesterase A OS=Erwinia chrysanthemi GN=pemA PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.757e-16 Identity = 72/212 (33.96%), Postives = 100/212 (47.17%), Query Frame = 1 Query: 64 QAVALRV--GADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHAR---KPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTY---LGRPW--------------KEYSRTVIMQSSITDLIHPAGWHEWDGNFAL-NTLFYG-------EHQNSGAGAGTSGRAKWKGFRVITSATEAQ 609 QAVAL V D + F + ++ YQDTLYV R FF +C I+GTVDFIFG+ A+ NCD+ +R SG + T+ NQ G+VI SR+ SD S P LGRPW +TV + +S+ + H GW + G NT+++ E+++ GAGA S K R +T A A+ Sbjct: 153 QAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRESD------SVPAKSYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDN--HIYGWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGAGAAVS-----KDRRQLTDAQAAE 351
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PMEA_DICD3 (Pectinesterase A OS=Dickeya dadantii (strain 3937) GN=pemA PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.996e-16 Identity = 72/212 (33.96%), Postives = 100/212 (47.17%), Query Frame = 1 Query: 64 QAVALRV--GADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHAR---KPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTY---LGRPW--------------KEYSRTVIMQSSITDLIHPAGWHEWDGNFAL-NTLFYG-------EHQNSGAGAGTSGRAKWKGFRVITSATEAQ 609 QAVAL V D + F + ++ YQDTLYV R FF +C I+GTVDFIFG+ A+ NCD+ +R SG + T+ NQ G+VI SR+ SD S P LGRPW +TV + +S+ + H GW + G NT+++ E+++ GAGA S K R +T A A+ Sbjct: 153 QAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRESD------SVPAKSYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDN--HIYGWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGAGATVS-----KDRRQLTDAQAAE 351
BLAST of DY258145 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 7.380e-15 Identity = 40/80 (50.00%), Postives = 48/80 (60.00%), Query Frame = 1 Query: 4 GEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDI 243 G+GF+ D+ F+NT P K V LRV D+S Y C + YQD LY H NRQ + + TVDFI GNAAAV Q C I Sbjct: 162 GDGFIRVDMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVEEYQDALYPHKNRQCYREYFLMDTVDFICGNAAAVFQFCQI 241 The following BLAST results are available for this feature:
BLAST of DY258145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258145 ID=DY258145; Name=DY258145; organism=Citrus clementina; type=EST; length=819bpback to top |