DY258166

Overview
NameDY258166
Unique NameDY258166
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length996
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_BRUSU (Adenylate kinase OS=Brucella suis GN=adk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.134e-17
Identity = 54/188 (28.72%), Postives = 90/188 (47.87%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAA-----------FEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTP 748
            LG PG+GKGTQ   + +  G   LS GD+LRA +   SE G   + ++  G++V  E+  +++ + ++     + F++DG+PR      A            +AV +++ +        E  +   I    Q R DDN E  RKR   + E + P+  YY   G++R I+   PV EV   ++ +  P
Sbjct:    6 LGPPGAGKGTQAGLLTKKHGIPQLSTGDMLRAAVAQQSEIGKRAKAVMDAGQLVSDEIVNQIVSERIDAPDCANGFILDGYPRTVPQAQALSQMLSGKGLKLDAVIELKVDENALVKRMESRVAETIAKGGQVRSDDNPEAFRKRLVEYREKTAPLSSYYAGTGELRVINGMAPVEEVTAEIERILVP 193          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_BRUSI (Adenylate kinase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=adk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.134e-17
Identity = 54/188 (28.72%), Postives = 90/188 (47.87%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAA-----------FEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTP 748
            LG PG+GKGTQ   + +  G   LS GD+LRA +   SE G   + ++  G++V  E+  +++ + ++     + F++DG+PR      A            +AV +++ +        E  +   I    Q R DDN E  RKR   + E + P+  YY   G++R I+   PV EV   ++ +  P
Sbjct:    6 LGPPGAGKGTQAGLLTKKHGIPQLSTGDMLRAAVAQQSEIGKRAKAVMDAGQLVSDEIVNQIVSERIDAPDCANGFILDGYPRTVPQAQALSQMLSGKGLKLDAVIELKVDENALVKRMESRVAETIAKGGQVRSDDNPEAFRKRLVEYREKTAPLSSYYAGTGELRVINGMAPVEEVAAEIERILVP 193          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_BRUO2 (Adenylate kinase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=adk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.134e-17
Identity = 54/188 (28.72%), Postives = 90/188 (47.87%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAA-----------FEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTP 748
            LG PG+GKGTQ   + +  G   LS GD+LRA +   SE G   + ++  G++V  E+  +++ + ++     + F++DG+PR      A            +AV +++ +        E  +   I    Q R DDN E  RKR   + E + P+  YY   G++R I+   PV EV   ++ +  P
Sbjct:    6 LGPPGAGKGTQAGLLTKKHGIPQLSTGDMLRAAVAQQSEIGKRAKAVMDAGQLVSDEIVNQIVSERIDAPDCANGFILDGYPRTVPQAQALSQMLSGKGLKLDAVIELKVDENALVKRMESRVAETIAKGGQVRSDDNPEAFRKRLVEYREKTAPLSSYYAGTGELRVINGMAPVEEVTAEIERILVP 193          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_BRUC2 (Adenylate kinase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=adk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.134e-17
Identity = 54/188 (28.72%), Postives = 90/188 (47.87%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAA-----------FEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTP 748
            LG PG+GKGTQ   + +  G   LS GD+LRA +   SE G   + ++  G++V  E+  +++ + ++     + F++DG+PR      A            +AV +++ +        E  +   I    Q R DDN E  RKR   + E + P+  YY   G++R I+   PV EV   ++ +  P
Sbjct:    6 LGPPGAGKGTQAGLLTKKHGIPQLSTGDMLRAAVAQQSEIGKRAKAVMDAGQLVSDEIVNQIVSERIDAPDCANGFILDGYPRTVPQAQALSQMLSGKGLKLDAVIELKVDENALVKRMESRVAETIAKGGQVRSDDNPEAFRKRLVEYREKTAPLSSYYAGTGELRVINGMAPVEEVTAEIERILVP 193          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_BORGA (Adenylate kinase OS=Borrelia garinii GN=adk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.134e-17
Identity = 59/209 (28.23%), Postives = 100/209 (47.85%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF-VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPKD 754
            LG PGSGKGT    I   F Y H+S GDL R  I + +  G  I+ ++++G++VP ++TIK+++ K      ND F++DGFPR   N    EA+ K  P   ++ F  +EE + +R+  R                                REDD  E ++ R K +   + P++++Y    ++  +DA+  + E+   +  +   K+
Sbjct:    6 LGPPGSGKGTISKIISNEFKYHHISTGDLFRENILNSTTLGKEIKKIVEKGELVPDQITIKIVKDKIKAIKKNDNFILDGFPR---NICQAEALDKFLPNVKIINFLINEELVIKRLSGRRICKSCNNIFNIYTLATKKNGICDVCKGDLYQREDDKEECLKTRLKEYKLQTKPLIEFYSKCSRLNNVDASVEIDEIKKKIIKIMLKKN 211          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_ALISL (Adenylate kinase OS=Aliivibrio salmonicida (strain LFI1238) GN=adk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.134e-17
Identity = 64/211 (30.33%), Postives = 101/211 (47.87%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAE-IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQG-----------------------------REDDNVETIRKRFKVFLESSLPVVQYY-----EAKGKVRKIDAAKPVAEVFDAVKAVFT 745
            LG PG+GKGTQ   I++ FG   +S GD+LRA  IK+G+E G   +++I  G++V  E+ + L+++ + +    K FL+DGFPR        +    +  ++VL FD ++E +  R+  R                                REDD  ET+  R  V+ E + P++ YY       K +  K D  K VAEV   ++ V +
Sbjct:    6 LGAPGAGKGTQAQFIMDKFGIPQISTGDMLRAAIIKAGTEMGKQAKSVIDAGQLVSDEIILGLVKERIAQEDCAKGFLLDGFPRTIPQADGLKE-NGVSIDYVLEFDVADEVIVERMSGRRAHLPSGRTYHVTFNPSKVEGQDDVTGEPLVIREDDKPETVLARLGVYHEQTAPLIAYYTKEAEAGKTEYLKFDGTKLVAEVSAEIEKVLS 215          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_SPHWW (Adenylate kinase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=adk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.787e-17
Identity = 57/207 (27.54%), Postives = 100/207 (48.31%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAVTKIEP---EFVLFFDCSEEEMERRILNR----NQG--------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 739
            LG PG+GKGTQ + +V   G   LS GD+LRA +K+G+  G   + +++ G++V  E+   L+ + ++  + ++  + DG+PR E    + + +        + V+  +  E+ +  RI  R    N G                          R DDN ET+R R   +   + P++  YEA+G VR++D    +A+V  A+ A+
Sbjct:    6 LGPPGAGKGTQASKLVADRGMVQLSTGDMLRAAVKAGTPIGLKAKAVMEAGELVSDEIVSGLIGEKLDSMAASEGAIFDGYPRTEAQAHSLDEILASRGRVLDHVIELEVDEDALVERITGRYTCANCGEGYHDRFKQPKVAGVCDVCGSAEFKRRPDDNEETVRTRMAEYRAKTAPILPVYEARGLVRRVDGMADMADVSAAIAAI 212          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_SHESW (Adenylate kinase OS=Shewanella sp. (strain W3-18-1) GN=adk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.787e-17
Identity = 62/208 (29.81%), Postives = 101/208 (48.56%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYY-----EAKGKVRKIDAAKPVAEVFDAVKAV 739
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   I  + V+  D  +EE+ +R+  R                   +G           R DD   T+RKR  ++ E + P+V+YY       + K  K D  + VA V + + +V
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQDDCAKGFLLDGFPRTIPQADAM-AANGISIDHVIEIDVPDEEIVKRMSGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLAIRPDDEEATVRKRLAIYHEQTKPLVEYYGKVAAAGQTKYNKFDGTQSVAAVSEQLASV 212          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_SHEPC (Adenylate kinase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=adk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.787e-17
Identity = 62/208 (29.81%), Postives = 101/208 (48.56%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYY-----EAKGKVRKIDAAKPVAEVFDAVKAV 739
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   I  + V+  D  +EE+ +R+  R                   +G           R DD   T+RKR  ++ E + P+V+YY       + K  K D  + VA V + + +V
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQDDCAKGFLLDGFPRTIPQADAM-AANGISIDHVIEIDVPDEEIVKRMSGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLAIRPDDEEATVRKRLAIYHEQTKPLVEYYGKVAAAGQTKYNKFDGTQSVAAVSEQLASV 212          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_PSYIN (Adenylate kinase OS=Psychromonas ingrahamii (strain 37) GN=adk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.787e-17
Identity = 59/198 (29.80%), Postives = 93/198 (46.97%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYY-----EAKGKVRKIDAAKPV 709
            LG PG+GKGTQ   +++ +G   +S GD+LRA  K+G+E G   + ++  G++V  E+ I L+++ +      K FL+DGFPR      A +    +  +FVL FD  +EE+ +R+  R                                R DD   T+RKR  ++   + P+V YY     +  G+  K D  K V
Sbjct:    6 LGAPGAGKGTQAQFMMDKYGIPQISTGDMLRAAAKAGTELGLKAKELMDAGQLVSDELIIDLVKERISAEDCAKGFLLDGFPRTIPQADAMK-TAGVAVDFVLEFDVPDEEIVKRMAGRRVHAGSGRTYHIVYNPPKVADKDDVTGDDLSIRPDDEESTVRKRLDIYHTQTEPLVAYYKNEAGQGNGEYHKFDGTKTV 202          
The following BLAST results are available for this feature:
BLAST of DY258166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_BRUSU2.134e-1728.72Adenylate kinase OS=Brucella suis GN=adk PE=3 SV=1[more]
KAD_BRUSI2.134e-1728.72Adenylate kinase OS=Brucella suis (strain ATCC 234... [more]
KAD_BRUO22.134e-1728.72Adenylate kinase OS=Brucella ovis (strain ATCC 258... [more]
KAD_BRUC22.134e-1728.72Adenylate kinase OS=Brucella canis (strain ATCC 23... [more]
KAD_BORGA2.134e-1728.23Adenylate kinase OS=Borrelia garinii GN=adk PE=3 S... [more]
KAD_ALISL2.134e-1730.33Adenylate kinase OS=Aliivibrio salmonicida (strain... [more]
KAD_SPHWW2.787e-1727.54Adenylate kinase OS=Sphingomonas wittichii (strain... [more]
KAD_SHESW2.787e-1729.81Adenylate kinase OS=Shewanella sp. (strain W3-18-1... [more]
KAD_SHEPC2.787e-1729.81Adenylate kinase OS=Shewanella putrefaciens (strai... [more]
KAD_PSYIN2.787e-1729.80Adenylate kinase OS=Psychromonas ingrahamii (strai... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BE04ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258166 ID=DY258166; Name=DY258166; organism=Citrus clementina; type=EST; length=996bp
GACAACAACAAAAAAACTTACATTGGCAATTGGCATCCCTCTGCCTTCTT
TCTTTCCCTCTTTATTCTTCTCTCTCTCTCCAAACAAAACAACGCTCGCA
ATTCGCTAAGATCGGTTATTCAGACTGAGTTAGTTGGCGCTGATGGGAAC
TGTGGTTGAAACTCCTGTCAAGGAAGCAGATGCTACCGTAACTGTGAAGA
AGCCCACTGTTGTTTTTGTTTTGGGTGGACCAGGCAGTGGAAAAGGAACC
CAGTGCGCAAACATTGTTGAACACTTTGGATACACCCATCTCAGTGCTGG
TGATCTTCTCAGAGCCGAAATCAAATCTGGCTCTGAAAATGGAACCATGA
TTCAAAACATGATTAAAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATT
AAGCTTCTCCAAAAAGCAATGGAGGAAAGTGGAAATGATAAATTTCTCAT
CGATGGTTTTCCCAGAAACGAGGAAAATCGTGCTGCATTTGAAGCTGTTA
CCAAAATTGAGCCAGAATTCGTTCTGTTTTTTGACTGTTCTGAGGAGGAG
ATGGAGAGGCGCATTTTGAATAGGAATCAGGGAAGAGAAGATGATAACGT
TGAGACAATTAGGAAGCGGTTTAAGGTTTTCTTAGAATCTAGTCTCCCTG
TGGTTCAATATTATGAAGCTAAGGGTAAAGTTCGGAAGATTGATGCTGCA
AAGCCTGTTGCAGAGGTTTTTGATGCTGTTAAAGCTGTTTTTACCCCAAA
AGATGAGAAGGCTGCTGCTTANGTCTTCTCTGTCCAGAGTATCAGATTTA
ATATCAAGGTGGTGGTATTGTTGTTGGCTGCTGCCTATTATTGTACTTTA
TTATTATGAGGTTATTATGTCACATGTTTTACTAAAATGTCATAAAAGTT
CATAATGTATCATGATATTTATTCCTGTTTGCCTAAGTATTCTTGTTATT
GAAACTGAAAACCAAGATCAAAATTTATAAAACAGCCTTGATGCTT
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