DY258166

Overview
NameDY258166
Unique NameDY258166
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length996
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_BART1 (Adenylate kinase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=adk PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.059e-16
Identity = 55/183 (30.05%), Postives = 90/183 (49.18%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEP-------EFVLFFDCSEEEMERRILNR----NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 733
            LG PG+GKGTQ   + E +   HLS GD+LR  I   +E G   + +I  G +VP  +  +++   ++E+   + F++DG+PR      A + + + +        E  +  D   E MERR+        Q R DDN     KR   + E + P+ ++Y  +G ++ ID    +AEV   +K
Sbjct:    6 LGPPGAGKGTQAKMLTEEYNIPHLSTGDMLREVIAKETEVGKKAKAIISSGALVPDSIVNQIVSDRIDEADCINGFILDGYPRTVGQAEALQQILESKNMRLDAVIELCVNEDALIERMERRVQETVAAGGQVRLDDNPVAFAKRLVEYREKTSPLSKFYSERGMLKVIDGMIGIAEVTRIIK 188          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_ACISJ (Adenylate kinase OS=Acidovorax sp. (strain JS42) GN=adk PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.059e-16
Identity = 57/191 (29.84%), Postives = 92/191 (48.17%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ-----------------------------GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAK 703
            LG PG+GKGTQ A I + FG   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + E      FL DGFPR      A +A   ++ ++VL  D   + +  R+  R                                REDD  ET++KR +V+ + + P+V YY +  K    +A K
Sbjct:    6 LGAPGAGKGTQAAFICQKFGIPQISTGDMLRAAVKAGTPLGLQAKAVMDAGQLVSDDLIINLVKERIAEPDCAQGFLFDGFPRTIPQADAMKA-AGVKLDYVLEIDVPFDAIIERMSGRRSHPASGRTYHVKFNPPKVEGKDDVTGEPLVQREDDKEETVKKRLQVYSDQTRPLVDYYSSWAKTDPANAPK 195          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_SYNP6 (Adenylate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=adk PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.383e-16
Identity = 51/172 (29.65%), Postives = 91/172 (52.91%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGN-DKFLIDGFPRNEENRAAFE-AVTKIEPEF--VLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFD 724
            LG PG+GKGTQ   + E     H+S G+LLRA + + +  G   +  +  G++VP  + + L++  +++    + +++DGFPRN     A    +T+I  +    +  D  +  +  R+L R  GR DD    IR+R +V+ E + P++ ++  + ++  ID    VA V D
Sbjct:    7 LGPPGAGKGTQAVVVAEQLQLAHISTGELLRAAVTAQTPLGIEAKGYMDRGELVPDSLVLGLVRDRLQQPDTANGWILDGFPRNRSQAEALNLLLTEINQQVDRAVNLDVPDPVIIERMLAR--GRADDTESVIRRRLEVYREQTAPLIDFFRDRQQLLAIDGNSEVAAVTD 176          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_SYNE7 (Adenylate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=adk PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.383e-16
Identity = 51/172 (29.65%), Postives = 91/172 (52.91%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGN-DKFLIDGFPRNEENRAAFE-AVTKIEPEF--VLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFD 724
            LG PG+GKGTQ   + E     H+S G+LLRA + + +  G   +  +  G++VP  + + L++  +++    + +++DGFPRN     A    +T+I  +    +  D  +  +  R+L R  GR DD    IR+R +V+ E + P++ ++  + ++  ID    VA V D
Sbjct:    7 LGPPGAGKGTQAVVVAEQLQLAHISTGELLRAAVTAQTPLGIEAKGYMDRGELVPDSLVLGLVRDRLQQPDTANGWILDGFPRNRSQAEALNLLLTEINQQVDRAVNLDVPDPVIIERMLAR--GRADDTESVIRRRLEVYREQTAPLIDFFRDRQQLLAIDGNSEVAAVTD 176          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_RHOBA (Adenylate kinase OS=Rhodopirellula baltica GN=adk PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.383e-16
Identity = 49/166 (29.52%), Postives = 88/166 (53.01%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFE---AVTKIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAA 700
            +G PG+GKGTQC  + +     H+  G +LRA      E+G  I   I  G   P +  ++++ + + +      +L+DGFPR +   +AF+       ++ + VL    S + +  R+  R +   R DD+ E IR+RF+++ + + P++ +Y  +G VR IDA+
Sbjct:    6 IGPPGAGKGTQCELLSKALKVPHIGTGGMLRA---LEPESGEQIHLRIDRGHFAPDDFVLQMVAERLSQPDSRTGYLLDGFPRTQVQASAFDKQLVAASLKLDHVLHLQVSADVLIERLRKRGETENRADDSEEFIRERFRIYEDRTAPLLDHYRCQGLVRDIDAS 168          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_RALME (Adenylate kinase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=adk PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.383e-16
Identity = 70/216 (32.41%), Postives = 103/216 (47.69%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKIE--PEFVLFFDCSEEEMERRILNRNQG-------------------------REDDNVETIRKRFKVFLESSLPVVQYY-------EAKGKV-----RKI----DAAKPVAEVFDAVK 733
            LG PG+GKGTQ   I E FG   +S GD+LRA +K+G+  G   + ++  G +V  ++ I L++  +++   +K +L DGFPR   +  A  EA   I+   E  + FD   E M  R ++   G                         R+DD  ET+RKR  V+ + + P+V YY       +A  KV     RKI    +  K  A VFDA+K
Sbjct:    6 LGAPGAGKGTQAKFICEKFGIPQISTGDMLRAAVKAGTPLGIEAKKVMDAGGLVSDDIIIGLVKDRLKQPDCEKGYLFDGFPRTIPQAEAMKEAGVAIDYVLEIDVPFDAIIERMSGRRVHVASGRTYHVKFNPPKADMVDDETGEALIQRDDDKEETVRKRLDVYSQQTRPLVDYYSNWAANGDASAKVSPPKYRKIAGLGEVDKITASVFDALK 221          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_PYRHO (Adenylate kinase OS=Pyrococcus horikoshii GN=adk PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.383e-16
Identity = 55/204 (26.96%), Postives = 95/204 (46.57%), Query Frame = 2
Query:  224 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAV-----TKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 733
            G PGSGK TQ   I E +G T++S+GD++RAEI S +  G  ++  +  G ++P  +   L+   +     + F++DG+PR  E   A E        KI+    +F   ++EE  RRI  R                                R DD  E + KR+ +++ +  P++++Y+ +G   KID    + EV++ ++
Sbjct:    7 GPPGSGKSTQARRITERYGLTYISSGDIIRAEISSRTPLGLEMEKYLSRGDLIPDTIVNTLIISKLRRV-RENFIMDGYPRTPEQVIALENYLYDHGIKIDVAIDIFI--TKEESVRRISGRRICSKCGAVYHIEFNPPKIPGKCDICGGDLIQRPDDRPEIVEKRYDIYMRNMEPIIKFYQKQGIYVKIDGHGSINEVWERIR 207          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_PHOPR (Adenylate kinase OS=Photobacterium profundum GN=adk PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.383e-16
Identity = 61/201 (30.35%), Postives = 97/201 (48.26%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQG-----------------------------REDDNVETIRKRFKVFLESSLPVVQYY--EAKG---KVRKIDAAKPVAEV 718
            LG PG+GKGTQ   I+  FG   +S GD+LRA IK+G+E G   +++I  G++V  ++ + L+++ + +    K FL+DGFPR        + V  +  ++V+ FD ++  +  R+  R                                REDD  ET+  R  V+   + P++ YY  EA+    +  K D  K VAEV
Sbjct:    6 LGAPGAGKGTQAQFIMAKFGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVSDDIILGLVKERIAQDDCAKGFLLDGFPRTIPQADGLKEV-GVVVDYVIEFDVADSVIVERMAGRRAHLASGRTYHNVYNPPKVEGKDDVTGEDLVIREDDKEETVLARLGVYHNQTAPLIAYYGKEAEAGNTQYLKFDGTKAVAEV 205          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_CELJU (Adenylate kinase OS=Cellvibrio japonicus (strain Ueda107) GN=adk PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.383e-16
Identity = 61/189 (32.28%), Postives = 97/189 (51.32%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRN-EENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYYE---AKGKVR 685
            LG PG+GKGTQ   I+EHFG   +S GD+LRA +K+G+  G   ++++  G +V  ++ I L+++ +  S  ++ FL DGFPR   +  A  EA   I  + V+     +EE+  R+  R                   +G           R DD+  T+RKR  V+ E + P+V +Y+   A+GKV+
Sbjct:    6 LGAPGAGKGTQAQLIMEHFGIPQISTGDMLRAAVKAGTPLGLQAKDIMASGGLVSDDLIIALVKERISSSDCSNGFLFDGFPRTIPQAEALLEADVHI--DHVIEIHVPDEEIVARLSGRRVHEASGRVYHIIHNAPRVEGHDDVTGEPLVQRPDDHEATVRKRLAVYHEQTEPLVGFYQKLVAEGKVK 192          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_BORRA (Adenylate kinase OS=Borrelia recurrentis (strain A1) GN=adk PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.383e-16
Identity = 57/210 (27.14%), Postives = 102/210 (48.57%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGN-DKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-------------------------QG----REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPKDEK 760
            LG PGSGKGT    +     Y H+S GDL R  I++ +  G  I+ +++ G++VP  +TIK+++  +    N D F++DGFPRN     A E    +E   ++ F  +E+ + +R+  R                          QG    R+DD  E+++ R + +   + P++ +Y    ++  IDA+K + EV   +  + +  ++K
Sbjct:    6 LGPPGSGKGTIAKILSNELNYYHISTGDLFRTNIENDTPLGKEIKQIVENGQLVPDSITIKVVEDKINTIDNRDNFILDGFPRNINQ--AIELDRLLENIKIINFLINEKLLVKRLSGRRICQSCCKIFNIYTLPTKEKEICDFCQGILYQRKDDTKESLKIRLQEYNLQTKPLINFYSNSNRLNNIDASKNINEVQKNLMEIISKIEKK 213          
The following BLAST results are available for this feature:
BLAST of DY258166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_BART11.059e-1630.05Adenylate kinase OS=Bartonella tribocorum (strain ... [more]
KAD_ACISJ1.059e-1629.84Adenylate kinase OS=Acidovorax sp. (strain JS42) G... [more]
KAD_SYNP61.383e-1629.65Adenylate kinase OS=Synechococcus sp. (strain ATCC... [more]
KAD_SYNE71.383e-1629.65Adenylate kinase OS=Synechococcus elongatus (strai... [more]
KAD_RHOBA1.383e-1629.52Adenylate kinase OS=Rhodopirellula baltica GN=adk ... [more]
KAD_RALME1.383e-1632.41Adenylate kinase OS=Ralstonia metallidurans (strai... [more]
KAD_PYRHO1.383e-1626.96Adenylate kinase OS=Pyrococcus horikoshii GN=adk P... [more]
KAD_PHOPR1.383e-1630.35Adenylate kinase OS=Photobacterium profundum GN=ad... [more]
KAD_CELJU1.383e-1632.28Adenylate kinase OS=Cellvibrio japonicus (strain U... [more]
KAD_BORRA1.383e-1627.14Adenylate kinase OS=Borrelia recurrentis (strain A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BE04ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258166 ID=DY258166; Name=DY258166; organism=Citrus clementina; type=EST; length=996bp
GACAACAACAAAAAAACTTACATTGGCAATTGGCATCCCTCTGCCTTCTT
TCTTTCCCTCTTTATTCTTCTCTCTCTCTCCAAACAAAACAACGCTCGCA
ATTCGCTAAGATCGGTTATTCAGACTGAGTTAGTTGGCGCTGATGGGAAC
TGTGGTTGAAACTCCTGTCAAGGAAGCAGATGCTACCGTAACTGTGAAGA
AGCCCACTGTTGTTTTTGTTTTGGGTGGACCAGGCAGTGGAAAAGGAACC
CAGTGCGCAAACATTGTTGAACACTTTGGATACACCCATCTCAGTGCTGG
TGATCTTCTCAGAGCCGAAATCAAATCTGGCTCTGAAAATGGAACCATGA
TTCAAAACATGATTAAAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATT
AAGCTTCTCCAAAAAGCAATGGAGGAAAGTGGAAATGATAAATTTCTCAT
CGATGGTTTTCCCAGAAACGAGGAAAATCGTGCTGCATTTGAAGCTGTTA
CCAAAATTGAGCCAGAATTCGTTCTGTTTTTTGACTGTTCTGAGGAGGAG
ATGGAGAGGCGCATTTTGAATAGGAATCAGGGAAGAGAAGATGATAACGT
TGAGACAATTAGGAAGCGGTTTAAGGTTTTCTTAGAATCTAGTCTCCCTG
TGGTTCAATATTATGAAGCTAAGGGTAAAGTTCGGAAGATTGATGCTGCA
AAGCCTGTTGCAGAGGTTTTTGATGCTGTTAAAGCTGTTTTTACCCCAAA
AGATGAGAAGGCTGCTGCTTANGTCTTCTCTGTCCAGAGTATCAGATTTA
ATATCAAGGTGGTGGTATTGTTGTTGGCTGCTGCCTATTATTGTACTTTA
TTATTATGAGGTTATTATGTCACATGTTTTACTAAAATGTCATAAAAGTT
CATAATGTATCATGATATTTATTCCTGTTTGCCTAAGTATTCTTGTTATT
GAAACTGAAAACCAAGATCAAAATTTATAAAACAGCCTTGATGCTT
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