DY258175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH603_RHOBA (60 kDa chaperonin 3 OS=Rhodopirellula baltica GN=groL3 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.702e-30 Identity = 82/165 (49.70%), Postives = 107/165 (64.85%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGY 497 VGA TE+E+KEKK RVEDAL+AT+AA LLR S KV A +TL D++ VG NIV RA PL +I++NAG +G +V EKVL+ ++ GYNA T YEDL+ +G+IDPTKV R L +A+SVA L SD +V E +PE + AG+ D+ Y Sbjct: 380 VGAATESEMKEKKARVEDALHATRAAVEEGILPGGGVALLRASGKVKAA-DTL-TDDQLVGYNIVLRACRAPLTMISENAGQDGGIVCEKVLAMKGNE-GYNALTDVYEDLVKSGVIDPTKVTRTALGNAASVATLLLTSDALVAE--KPEKSGKAGHGGDHDMY 539
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH602_SYNPX (60 kDa chaperonin 2 OS=Synechococcus sp. (strain WH8102) GN=groL2 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.702e-30 Identity = 76/166 (45.78%), Postives = 103/166 (62.05%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE--PAMPAGNPMDNSG 494 VGA TETELK +KLR+EDALNAT+AA TLL+L+ ++ + E L+ D+ + G I++RAL P+ IA NAG NG VV E + +S G+NA TG YEDLMAAGI+D KVVR ++ A S+A + ++ V+ + EPE P G+PM G Sbjct: 379 VGAPTETELKNRKLRIEDALNATRAAIEEGIVPGGGTTLLQLADGLNGLVEQLEGDQ-RTGVEILQRALVAPVHHIATNAGHNGDVVIEAMRNSGQ---GFNALTGTYEDLMAAGIVDAAKVVRLAVQDAVSIASLLITTEVVIADKPEPEAPPVDGGGDPMGGMG 540
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH602_ROSDO (60 kDa chaperonin 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=groL2 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.702e-30 Identity = 71/166 (42.77%), Postives = 104/166 (62.65%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 500 VG TE E+KE+K RV+DALNAT+AA L++ ++ + T DN+++ VG +IV++AL PL+ IA+NAGV+GSVV+ K+ SD+ K+G+NA T Y D+ A G+IDP KVVR L+ A+S+A + ++ +V + E A P G D G G Sbjct: 381 VGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQAGKHLEGL--TGDNNDQNVGISIVRKALEAPLRQIAENAGVDGSVVAGKIRESDDLKFGFNAQTEEYGDMFAFGVIDPAKVVRTALQDAASIAGLLITTEAMVADRPAKEGAAPGGGMPDMGGMG 544
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH602_RHOPB (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain BisB18) GN=groL2 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.702e-30 Identity = 73/158 (46.20%), Postives = 99/158 (62.66%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAG 473 VG TE E+KEKK RVEDALNAT+AA LLR V I DN + + G NIV +AL P++ IA+NAGV GS+V K+L + + +G++A T Y D++A GI+DP KVVR L+ ASSVA + ++C+V E+ ++ PAMP G Sbjct: 381 VGGATEVEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRISN--DNPDVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEEYVDMLAKGIVDPAKVVRTALQDASSVAALLVTTECMVAEMPRDAAPAMPGG 536
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH601_SYNSC (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9605) GN=groL1 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.702e-30 Identity = 76/166 (45.78%), Postives = 103/166 (62.05%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA--GNPMDNSG 494 VGA TETELK +KLR+EDALNAT+AA TLL+L+ +DA+ +L+ D+ + G IV+RAL P+ IA NAG NG VV + SS G+NA +G YEDLMAAGI+D KVVR ++ + S+A + ++ V+ + EP PA G+PM G Sbjct: 379 VGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLLQLADSLDALASSLNGDQ-RTGVEIVQRALTAPIHQIATNAGQNGDVVIAGMRSSGQ---GFNALSGVYEDLMAAGIVDAAKVVRLAVQDSISIASLLITTEVVIADKPEPPAPAPAGDGDPMGGMG 540
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_BACTN (60 kDa chaperonin OS=Bacteroides thetaiotaomicron GN=groL PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.136e-29 Identity = 73/159 (45.91%), Postives = 98/159 (61.64%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 479 VGA +E E+KEKK RV+DAL AT+AA +R ++ +K DN +E G I+KRA+ PL+ I NAG G+VV +KV +GYNA T YE+L AAG++DP KV R LE+A+S+A FL ++CV+VE KE +P MP G P Sbjct: 381 VGAASEVEMKEKKDRVDDALRATRAAIEEGIIPGGGVAYIRAIDSLEGMKG--DNADETTGIGIIKRAIEEPLREIVANAGKEGAVVVQKVREGKGD-FGYNARTDVYENLHAAGVVDPAKVARVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAP 536
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH603_NITHX (60 kDa chaperonin 3 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=groL3 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.136e-29 Identity = 76/167 (45.51%), Postives = 100/167 (59.88%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPAGNPMDNSGY 497 VG TE E+KEKK RVEDALNAT+AA LLR V I DN + + G NIV +AL P++ IA+NAGV GS+V KVL + +G++A Y D++A GIIDP KVVR L+ A+SVA + ++ +V E+ +EP PAMP G M G+ Sbjct: 381 VGGATEIEVKEKKDRVEDALNATRAAVQEGIVPGGGTALLRAKKAVGRIAN--DNPDVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKVLENKTETFGFDAQKEEYVDMVAKGIIDPAKVVRTALQDAASVAGLLVTTEAMVAELPKEEPAPAMPGGGGMGGMGF 545
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH602_NITWN (60 kDa chaperonin 2 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL2 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.136e-29 Identity = 69/160 (43.12%), Postives = 103/160 (64.38%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI---KEPEPAMPAG 473 VG TE E+KE+K RV+DA++AT+AA LLR S ++ IK ND++K G IV++AL P + IA NAG +GSV+ K+L + + YG+++ TG+Y +L++ GIIDPTKVVR +++A+SVA + ++ +V E+ P PAMP G Sbjct: 381 VGGATEVEVKERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKRIKT--QNDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKEQYSYGFDSQTGDYGNLISKGIIDPTKVVRTAIQNAASVASLLITTEAMVAELPKKNSPAPAMPGG 538
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH602_GLUDA (60 kDa chaperonin 2 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL2 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.136e-29 Identity = 69/155 (44.52%), Postives = 103/155 (66.45%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 467 VG TE E+KE+K RV+DALNAT+AA L R + V ++ ND++++G +IV++AL PL+ IA+NAG +G+VV+ KVL + + +G++A G ++DL+AAGIIDPTKVVR L+ A+SV + ++ +V E EP+PA P Sbjct: 381 VGGSTEIEVKERKDRVDDALNATRAAVEEGIVPGGGTALARAAEVVARLQ--FHNDDQRIGGDIVRKALQAPLRQIAENAGEDGAVVAGKVLENGAYNFGFDAQIGEFKDLVAAGIIDPTKVVRTALQDAASVGSLLITTEVLVTEKAEPKPAAP 533
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH601_SYNPW (60 kDa chaperonin 1 OS=Synechococcus sp. (strain WH7803) GN=groL1 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.136e-29 Identity = 77/165 (46.67%), Postives = 100/165 (60.61%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA-MPAGNPMDNSG 494 VGA TETELK +KLR+EDALNAT+AA TL++L+ +D + L D ++ G IV RAL PL+ IA NAG NG VV E+V S G+NA TG YE+L+ AGI+D KVVR L+ A S+A + ++ VV + EP A P G+PM G Sbjct: 379 VGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLIQLAGSLDGLANQLHGD-QRTGVEIVHRALSAPLRQIAINAGANGDVVVEQVQRSGQ---GFNALTGGYENLLEAGILDAAKVVRLGLQDAVSIASLLITTEVVVADKPEPPAAPAPGGDPMGGMG 539 The following BLAST results are available for this feature:
BLAST of DY258175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258175 ID=DY258175; Name=DY258175; organism=Citrus clementina; type=EST; length=860bpback to top |