DY258175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: RUBA_PEA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 4.173e-32 Identity = 75/156 (48.08%), Postives = 106/156 (67.95%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 470 VGA TETEL+++KLR+EDA NAT AA L+ LS V AIKE L++ +E++GA+IV++AL P LIA+NAG+ G VV EK+ + + + GYNA T YE+L+ +G+IDP KV RC L++A+SVA L + +VVE +P+ A+ A Sbjct: 426 VGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSGYVPAIKEKLEDADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIKNGE-WEVGYNAMTDTYENLVESGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAAVAA 580
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_RUBXD (60 kDa chaperonin OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=groL PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.173e-32 Identity = 78/157 (49.68%), Postives = 103/157 (65.61%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 473 VGA TETELKEKK RVEDAL+AT+AA LL+ V + + LD DE + GA IV RAL P++ IA+NAG +GS+V +KV + + G+NA TG YEDL+AAG+IDP V R L++A+S+A + +D VV E +E +PAMP G Sbjct: 380 VGAATETELKEKKHRVEDALSATRAALEEGIVPGGGVALLKAQKAVGELLDELDGDE-RTGARIVYRALEEPIRQIAENAGADGSIVVDKVRAQGD-SIGFNALTGGYEDLVAAGVIDPAMVTRSALQNAASIAGLLVTTDVVVAEPEEEQPAMPGG 534
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH602_GLOVI (60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=groL2 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.173e-32 Identity = 79/166 (47.59%), Postives = 107/166 (64.46%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 500 VGA TETELK++KLR+EDALNATKAA TLL L+ K+DAIK L D+EK GA+++ RAL PL+ IA NAGV GSV+++KV D GY+A G + D++AAG+ DP KVVR L++A+S+A L ++ ++V+ +PE D G G Sbjct: 380 VGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLLHLTKKIDAIKAGL-ADDEKTGADLIARALEAPLRQIADNAGVEGSVIAQKVRELD-FNIGYDAMKGEFVDMLAAGVADPAKVVRSALQNAASIAAMVLTTEVLIVD--KPEKKKAGAGAPDMGGMG 541
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_SYNR3 (60 kDa chaperonin OS=Synechococcus sp. (strain RCC307) GN=groL PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.118e-32 Identity = 80/163 (49.08%), Postives = 105/163 (64.42%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHK---YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 482 VGA TETE+K+KKLR+EDA+NATKAA TL L+ + + EE +GANIV +AL PLK IA+NAG NGSVV+E V HK G+NAA+ Y D++AAGIIDP KV R L++A+S+A L ++C+VV++ E + A PAG M Sbjct: 379 VGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALTEWANQNLSGEELIGANIVAQALDAPLKRIAENAGANGSVVAENV----RHKPFSEGFNAASNEYVDMLAAGIIDPAKVTRSGLQNAASIAGMVLTTECIVVDLPEKKEAAPAGGGM 537
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_ALKOO (60 kDa chaperonin OS=Alkaliphilus oremlandii (strain OhILAs) GN=groL PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.118e-32 Identity = 74/157 (47.13%), Postives = 106/157 (67.52%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 473 VGA TETELKE+KLR+EDALNAT+A +L+ + V+A+ ET + DE + G I++RAL PL+ IA NAG+ GSV+ EKV+SS+ G++A T Y +++ AGI+DPTKV R L++A+SV+ L ++ +V+IK EP+MP G Sbjct: 379 VGAATETELKERKLRIEDALNATRAGVEEGMVAGGGASLVHVIPAVEALLETTEGDE-RTGVKIIRRALEEPLRQIAANAGLEGSVIVEKVMSSEKG-IGFDALTEKYVNMIEAGIVDPTKVTRSALQNAASVSAMLLTTEGAIVDIKSDEPSMPGG 533
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH602_PROMP (60 kDa chaperonin 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groL2 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.118e-32 Identity = 76/167 (45.51%), Postives = 107/167 (64.07%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 503 VGA TETE+K+KKLR+EDA+NATKAA TL L+ + + + EE +GANIV+ +L PL IA+NAG NG+V++E V S + G+NAATG+Y D+ AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG P + Y Sbjct: 379 VGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPILKEWADKALSGEELIGANIVEASLTSPLMRIAENAGSNGAVIAENVKSKPFND-GFNAATGDYVDMSAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGAPGMGGDFDY 544
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH601_GLOVI (60 kDa chaperonin 1 OS=Gloeobacter violaceus GN=groL1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.118e-32 Identity = 76/157 (48.41%), Postives = 108/157 (68.79%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 473 VGA TETELK++KLR+EDA+NATKAA LL L++ + ++L EEK+GA I+++AL PL+ IA+NAG+ GSV++EKV + + +G+NA T YEDL+AAGIIDP KV R L++A+S+A L ++C+VV+ K + PAG Sbjct: 379 VGAATETELKDRKLRIEDAVNATKAAIAEGIVPGGGTALLHLAAGMGGFIDSLSG-EEKIGARIIQKALEGPLRQIAENAGLEGSVIAEKVRNLE-FNFGFNAMTNEYEDLVAAGIIDPVKVTRSALQNAASIAAMVLTTECIVVD-KPEDDKTPAG 532
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH601_ANAVT (60 kDa chaperonin 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.118e-32 Identity = 76/167 (45.51%), Postives = 104/167 (62.28%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 503 VGA TETE+K+KKLR+EDA+NATKAA TL L+ +++ + DEE GA IV RAL PLK IA+NAG NG+V++E+V G+NAAT + D+ AGI+DP KV R L++A+S+A L ++C+VV+ EP+ A PAG + Y Sbjct: 379 VGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLTPELEVWANSNLKDEELTGALIVARALPAPLKRIAENAGQNGAVIAERV-KEKAFNVGFNAATNEFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEPKDAAPAGAGAGGGDFDY 544
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH601_SORC5 (60 kDa chaperonin 1 OS=Sorangium cellulosum (strain So ce56) GN=groL1 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 9.297e-32 Identity = 79/166 (47.59%), Postives = 107/166 (64.46%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 500 VGA TETE+KEKK RVEDAL+AT+AA L R ++ ++++K NDE VG +V+RA+ PL+ IA+NAGV+G+VV+EKV S +GYNAAT +YEDL+A G+IDP KVVR + +A+SVA L ++ +V E + E A G P G G Sbjct: 381 VGAATETEMKEKKARVEDALHATRAAVEEGIVVGGGVALFRAAASLESLKF---NDERDVGVRLVRRAVEAPLRQIAQNAGVDGTVVAEKVRSGAP-TFGYNAATDSYEDLLAGGVIDPAKVVRHAISNAASVAALMLTTEALVAEKPKKEKAAAGGAPGGMGGMG 542
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: RUBA_WHEAT (RuBisCO large subunit-binding protein subunit alpha, chloroplastic (Fragment) OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.214e-31 Identity = 72/152 (47.37%), Postives = 104/152 (68.42%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEP 458 VGA TETEL++++LR+EDA NAT AA + LS+ V AIKET+++ +E++GA+I+++AL P LIA NAGV G VV EK+ S+ + GYNA T YE+L+ +G+IDP KV RC L++A+SV+ L + +VVE +P+P Sbjct: 381 VGATTETELEDRQLRIEDAKNATFAAIEEGIVPGGGAAYVHLSTYVPAIKETIEDHDERLGADIIQKALQAPASLIANNAGVEGEVVIEKIKESE-WEMGYNAMTDKYENLIESGVIDPAKVTRCALQNAASVSGMVLTTQAIVVEKPKPKP 531 The following BLAST results are available for this feature:
BLAST of DY258175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258175 ID=DY258175; Name=DY258175; organism=Citrus clementina; type=EST; length=860bpback to top |