DY258175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_MAGSM (60 kDa chaperonin OS=Magnetococcus sp. (strain MC-1) GN=groL PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.342e-30 Identity = 75/166 (45.18%), Postives = 104/166 (62.65%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 500 VG TE E+KE+K RV+DAL+AT+AA LLR + + N +++VG NIV RAL PL++IA NAG GSVV +V+ + +G+NAATG YEDL+A+G+IDP KVVR L+ A+SVA + ++ +V E+ + EPAMP G+ G G Sbjct: 381 VGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGVALLR-AREASLTNLQGANHDQQVGINIVTRALEEPLRIIASNAGAEGSVVVNRVVETKETNFGFNAATGVYEDLVASGVIDPAKVVRHALQAAASVAGLMITTEAMVAELPKDEPAMPGGDMGGMGGMG 545
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_BACV8 (60 kDa chaperonin OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=groL PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.342e-30 Identity = 74/159 (46.54%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 479 VGA +E E+KEKK RV+DAL AT+AA +R S ++ +K DN++E G I+KRA+ PL+ I NAG G+VV +KV +GYNA T YE+L AAG++DP KV R LE+A+S+A FL ++CV+VE KE +P MP G P Sbjct: 381 VGAASEVEMKEKKDRVDDALCATRAAIEEGIVPGGGVAYIRASEALEGLKG--DNEDETTGIEIIKRAIEEPLRQIVANAGKEGAVVVQKVREGKGD-FGYNARTDVYENLHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAP 536
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_AZOPC (60 kDa chaperonin OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=groL PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.342e-30 Identity = 75/164 (45.73%), Postives = 103/164 (62.80%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 494 VGA +E E+KEKK RV+DAL+AT+AA +R S ++ K N++E G IVKRA+ PL+ I +NAG G+V++++V + +GYNA TG YEDL AG+IDPTKV R LE+A+S+A L ++CV+ E+KE PA PA PM G Sbjct: 381 VGAPSEVEMKEKKDRVDDALSATRAAIEEGTVPGGGVAYVRAISILEGFKGI--NEDETTGIEIVKRAIEEPLRQIVENAGKEGAVIAQRV-KEEKDDFGYNARTGIYEDLYVAGVIDPTKVARVALENAASIAGMLLTTECVITEVKEENPA-PAMPPMGGGG 540
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH602_TRIEI (60 kDa chaperonin 2 OS=Trichodesmium erythraeum (strain IMS101) GN=groL2 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.342e-30 Identity = 73/167 (43.71%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 503 VGA TETE+K++KLR+EDA+NATKAA TL L+ +++ EE G+ IV RAL PLK IA+NAG NG+V+ E+V D G+NAA + D+ AGI+DP KV R L++A+S+A L ++C+VV+ EP+ PAG M + Y Sbjct: 379 VGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPELETWANENLQSEELTGSLIVSRALLAPLKRIAENAGQNGAVIGERVKEKD-FNTGFNAANNEFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEPKENAPAGAGMGGGDFDY 544
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH601_PROM2 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9215) GN=groL1 PE=3 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.342e-30 Identity = 75/167 (44.91%), Postives = 104/167 (62.28%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAM---PAGNPMDNSG 494 VGA TETE+K KKLR+ED+LNATKAA TL+ +S + + +T +D+ + G NI+K AL P K IAKNAG NG VV ++ + G+NA +G YEDL +GI+DPTKV+R L+ + S+A L ++ + +I EPEPA P+G+PM G Sbjct: 379 VGAATETEMKYKKLRIEDSLNATKAAIEEGVVPGGGQTLIEISDDLLNLSQT-SSDDLRTGINIIKEALLEPTKQIAKNAGFNGDVVIAEIKRLNK---GFNANSGKYEDLKNSGILDPTKVIRLALQDSVSIAAMLLTTEVAIADIPEPEPAAPGGPSGDPMGGMG 541
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_WOLSU (60 kDa chaperonin OS=Wolinella succinogenes GN=groL PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.753e-30 Identity = 76/164 (46.34%), Postives = 101/164 (61.59%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 494 VGA +E E+KEKK RV+DAL+ATKAA L+R ++KV K L DE K+G I+KRA+ PLK IA+NAG + VV+ V + N +G+NAA G Y D+ A GIIDP KV R L++A SV+ L ++ + EIKE +PAMP + M G Sbjct: 381 VGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIRAAAKV---KLELSGDE-KIGYEIIKRAISAPLKQIAQNAGFDAGVVANNVEQNGNENFGFNAANGEYVDMFAEGIIDPLKVARIALQNAVSVSSLLLTTEATISEIKEDKPAMPDMSGMGGMG 540
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_WOLRE (60 kDa chaperonin OS=Wolinella recta GN=groL PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.753e-30 Identity = 79/166 (47.59%), Postives = 102/166 (61.45%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE--PEPAMPAGNPMDNSG 494 VGA TETE+KEKK RV+DAL+ATKAA ++ +KVD L DE +GA+IV+RAL PL+ IA+NAG + VV+ V S + YG+NAATG Y D+ AGIIDP KV R L++A SVA L ++ + E+KE P PAMP + M G Sbjct: 380 VGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAAFIKAGAKVDL---NLSGDEA-IGADIVRRALTAPLRQIAENAGFDAGVVANSVSVSKDDNYGFNAATGEYVDMFKAGIIDPVKVERIALQNAVSVASLLLTTEATISELKEDKPMPAMPDMSGMGGMG 541
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_THET8 (60 kDa chaperonin OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=groL PE=1 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 1.753e-30 Identity = 75/157 (47.77%), Postives = 103/157 (65.61%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLS-SDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 470 VGA TETELKEKK R EDALNAT+AA TLLR S V+ + + L+ DE GA IV+RAL P + IA+NAG GSV+ +++L+ + N +YG+NAATG + D++ AGI+DP KV R L++A+S+ L ++ VV E E + + PA Sbjct: 379 VGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEA-TGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKKESTPA 534
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_THET2 (60 kDa chaperonin OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=groL PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.753e-30 Identity = 75/157 (47.77%), Postives = 103/157 (65.61%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLS-SDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 470 VGA TETELKEKK R EDALNAT+AA TLLR S V+ + + L+ DE GA IV+RAL P + IA+NAG GSV+ +++L+ + N +YG+NAATG + D++ AGI+DP KV R L++A+S+ L ++ VV E E + + PA Sbjct: 379 VGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEA-TGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKKESTPA 534
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_CLONN (60 kDa chaperonin OS=Clostridium novyi (strain NT) GN=groL PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.753e-30 Identity = 78/164 (47.56%), Postives = 105/164 (64.02%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 494 VGA TETELKE+KLR+EDAL ATKAA LR +V+ K T DN E ++G I++RAL P++ IA NAG+ GSV+ +K+ +S++ G++A G Y ++M GI+DP KV R L++A+SVA TFL ++CVV EI E P MPA M G Sbjct: 379 VGAATETELKERKLRIEDALAATKAAVEEGIVAGGGTAYLRAIKEVE--KLTDDNAEVRLGIAIIRRALEEPVRQIAANAGLEGSVIIDKIKNSEDG-IGFDALEGEYTNMMQKGIVDPAKVTRSALQNAASVASTFLTTECVVAEIPEKNP-MPAAPGMGGMG 538 The following BLAST results are available for this feature:
BLAST of DY258175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258175 ID=DY258175; Name=DY258175; organism=Citrus clementina; type=EST; length=860bpback to top |