DY258191

Overview
NameDY258191
Unique NameDY258191
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1339
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY258191 vs. ExPASy Swiss-Prot
Match: UBA5_HUMAN (Ubiquitin-like modifier-activating enzyme 5 OS=Homo sapiens GN=UBA5 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.655e-11
Identity = 62/234 (26.50%), Postives = 108/234 (46.15%), Query Frame = 1 
Query:  196 IDYRISALEAQL-RDTTVSQPQTDTVSNGSYR----PSSAVDYGLSPDMIYRYSRHLLLPSFGVEGQSNLLKS-SILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPY-IGQSKVKSAAATCRSIN------------STVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKP-LVSGAA-LGLEGQLTVYNYNGGPCYRCLFP 834
            +  R+  LE +L ++ ++  P++     G  R     S  VD          YSR + L   G+      +++ ++ ++G GG+GS     L  CG+G+L + D+D VEL NM+R  +  +P+  G SKV++A  T R+IN            +TV   +H     ++  LE     ++V+   DN  +R  I+  C  LG+  + SG +   + G + +       C+ C  P
Sbjct:    8 LQQRVQELERELAQERSLQVPRSGDGGGGRVRIEKMSSEVVDSN-------PYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNR--LFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSENAVSGHIQLIIPGESACFACAPP 232
[Close]
BLAST of DY258191 vs. ExPASy Swiss-Prot
Match: YRVM_BACSU (Uncharacterized protein yrvM OS=Bacillus subtilis GN=yrvM PE=3 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 9.998e-11
Identity = 52/154 (33.77%), Postives = 80/154 (51.95%), Query Frame = 1 
Query:  325 MIYRYSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTVHIIEHREALRTSNALEILSQY-----EIVVDATDNAPSRYMISDCCVVLGKPLVS--GAA 765
            M++++SR+ L  + G EG   L  S++ V+G GG+GS A   LA  GVGR+ +VD D V++ N++RQ+      +GQ KV    A    IN    +I    AL+     E   Q+     + V+DA+D    +  +   C+    PL+S  GAA
Sbjct:    1 MLHQFSRNEL--AIGKEGLETLKNSTVAVLGVGGVGSFAAEALARSGVGRILLVDKDDVDITNVNRQLHALLSTVGQPKVDLMKARIADINPECEVI----ALKMFYTEETYEQFFDYGLDYVIDASDTICYKIHLMKECLKRDIPLISSMGAA 148
The following BLAST results are available for this feature:
BLAST of DY258191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
UBA5_HUMAN7.655e-1126.50Ubiquitin-like modifier-activating enzyme 5 OS=Hom... [more]
YRVM_BACSU9.998e-1133.77Uncharacterized protein yrvM OS=Bacillus subtilis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3CA02ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258191 ID=DY258191; Name=DY258191; organism=Citrus clementina; type=EST; length=1339bp
GACCGGTATCATTCTTTGAATTTGTCACTTTTCTGTCTAATTAGGGTTCC
TCTGATTGCCGCTTCACCTCTGACCCCACTTCACAGTCTTCACTGGACGT
CTTCGGTTGTTCAGAATATGGAGACAAACGGAGGTAGCACTGACGTGGCA
AGAGTCCTCGGCGAAATTGAAACCTTAAAGGCTGCTAAGAGTGATATTGA
TTATCGAATCTCCGCTCTTGAAGCTCAGCTTCGTGACACGACTGTTAGTC
AGCCCCAAACCGACACCGTTTCTAATGGTTCTTATCGTCCAAGCTCTGCC
GTTGATTATGGACTATCACCGGATATGATTTACCGTTACAGTCGCCACCT
CTTGCTTCCTTCTTTCGGTGTTGAAGGGCAATCGAATCTCCTCAAGTCTT
CGATTTTAGTGATTGGAGCTGGGGGCTTGGGCTCGCCGGCTCTGCTGTAT
CTTGCAGCTTGTGGTGTTGGGCGATTGGGTATTGTGGATCATGATGTAGT
TGAGCTTAACAACATGCACAGGCAGGTTATCCACACCGAACCATATATTG
GTCAATCAAAAGTGAAATCTGCTGCTGCTACTTGTCGTTCGATCAACTCC
ACTGTTCACATTATTGAGCACAGAGAAGCTTTACGCACATCCAATGCTTT
GGAAATACTGAGTCAATATGAGATAGTTGTAGATGCAACCGATAATGCTC
CAAGCCGTTACATGATCAGTGATTGTTGTGTGGTGTTGGGAAAGCCTCTG
GTATCAGGTGCTGCACTGGGACTGGAAGGGCAGCTCACAGTTTACAATTA
CAATGGAGGTCCTTGCTATCGTTGCCTATTTCCAACCCCCCACCAACTAC
AGCATGCCAAAGATGCGCTGATAGTGAAGTCCTTGGAGTAGTCCCTGGAA
TCATTGGCTGTCTCCAAGCCTTAAAGGGCATTAAGGTTGCAAGTGCTGTG
GGTGAACCCCTGTCAGGGCGGATGCCTCTGTTTGAAGCATTGTCACCCAC
AAATCCAAATTGTCAAAAAAAAAGGCAAAACCTCCCAATGGGAAAGCTTG
TGGAAAAAAATCAACCTTTTCCCCAAAAACCCTTTCAAAAATTTTGAATA
TAAAAAAAGTTCCCCCCCTCCCCCCTCGGCTCCCCCCTCCCCTTGAAAAT
GTAATTTTCCCCCCCCCAAAATTTTAAAAAAAACCCCCACAGGGGATAAA
AAAAAAAAAAATTTTGTTTAAAGGGGAAAAACCCTCATATTTTTATATTG
TTAATTTGGGGGGGGCCACCCCCCCCCCCCTCTTTTTGGGGGAGGTTTTT
TTTTTCTCTCTCCCCCCCACACACCCATCCACAAAAAAA
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