DY258200

Overview
NameDY258200
Unique NameDY258200
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15384 contig Ccv1_Contig15384:319..1237. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS2_STRA5 (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus agalactiae serotype V GN=prs2 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.493e-14
Identity = 42/113 (37.17%), Postives = 72/113 (63.72%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAVF 339
            VD+++  P+  ++     +S  D+VVVSP   G+ RAR+ A+ L D+P+AI+D  +      E   +IG+V+GK A+++DD+++T  T A+ A +L + GA E+YA  +H +F
Sbjct:  148 VDNLFTVPLFAEHYNQLGLSGEDVVVVSPKNSGIKRARSLAEYL-DSPIAIIDYAQDDSEREEGY-IIGEVEGKKAIIIDDILNTGKTFAEAAKILERGGATEIYAVASHGLF 258          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS2_STRA3 (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus agalactiae serotype III GN=prs2 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.493e-14
Identity = 42/113 (37.17%), Postives = 72/113 (63.72%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAVF 339
            VD+++  P+  ++     +S  D+VVVSP   G+ RAR+ A+ L D+P+AI+D  +      E   +IG+V+GK A+++DD+++T  T A+ A +L + GA E+YA  +H +F
Sbjct:  148 VDNLFTVPLFAEHYNQLGLSGEDVVVVSPKNSGIKRARSLAEYL-DSPIAIIDYAQDDSEREEGY-IIGEVEGKKAIIIDDILNTGKTFAEAAKILERGGATEIYAVASHGLF 258          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS2_ENTFA (Ribose-phosphate pyrophosphokinase 2 OS=Enterococcus faecalis GN=prs2 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 43/112 (38.39%), Postives = 69/112 (61.61%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAV 336
            VD+++  P+   Y   + +   ++V+VSP   GV RAR+ ++ L DA LAIVD       V +   +IG+V GK  ++VDD+++T  T+A  A +L + GA+EVYAC +H +
Sbjct:  148 VDNLFTMPLFAHYYRQQALVGEEIVIVSPKNSGVQRARSLSEYL-DATLAIVDHEEID-GVRQEGYVIGNVAGKKCILVDDILNTGQTLATAAEVLMKNGAQEVYACASHGL 257          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPR1_CANAL (Ribose-phosphate pyrophosphokinase 1 OS=Candida albicans GN=PRS1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.344e-14
Identity = 41/112 (36.61%), Postives = 65/112 (58.04%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAV 336
            VD++Y +P ++ Y+  +T+  ++ +++S D GG  RA   A +L D    ++ K R   N    M L+ DV  K+ V+VDDM DT GT+AK A +L    A++V A  TH +
Sbjct:  145 VDNLYAEPSVVRYI-KETIDYSEAIIISSDAGGAKRAAGLADRL-DLNFELIHKERARANEVSRMVLVVDVTDKICVIVDDMADTCGTLAKAAEVLLDNNAKDVIAIVTHGI 254          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS_DEIRA (Probable ribose-phosphate pyrophosphokinase OS=Deinococcus radiodurans GN=prs PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.674e-14
Identity = 48/151 (31.79%), Postives = 77/151 (50.99%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAVFRLDYKS*IYQLDL-----F*PINIPTNRLDRNSDSFAI 438
            VDH+    V+  +       +++ VV++PD G + RA   A++L D+ LA++DK R          LIGDV GK   +VDD I TAG++ +  ++    GA++VY   TH V+       I  LD+        + +P ++LDR     A+
Sbjct:  146 VDHLSADVVLSQHFKKCVPDAHNGVVLAPDAGSIKRASQIARRL-DSGLAMIDKERLSDTEVRPRALIGDVDGKTVFIVDDEISTAGSLVETVSIARSMGAKDVYVAVTHGVYSGPAIERIAALDVTQVASCNTVLVPQDKLDRAGGKLAV 295          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: PRPSB_DICDI (Ribose-phosphate pyrophosphokinase B OS=Dictyostelium discoideum GN=prsB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.410e-14
Identity = 45/125 (36.00%), Postives = 75/125 (60.00%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVS---SNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVA---------EVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAVF 339
            V++VY +P+ + Y+  K  +   + + V+VSP VGGV RA+A + KL ++ LAI+ +     +++         E   L+GDV GK+A+++DD+ DT  T+   +  L ++GA +VYA  TH VF
Sbjct:  145 VENVYTEPLFVKYIKKKKKTEFLNQEFVIVSPGVGGVKRAKAISDKL-ESELAIIHRANKEMSLSLSSSFSFDIEETVLVGDVTGKIAIIIDDIADTCKTLKLASKALIKKGAIKVYALVTHGVF 268          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: PRPSC_DICDI (Ribose-phosphate pyrophosphokinase C OS=Dictyostelium discoideum GN=prsC PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.264e-13
Identity = 43/110 (39.09%), Postives = 67/110 (60.91%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTH 330
            VD++Y +P+I+ Y+        + VV+SP V GV RA+  + KL+   LAI+D++  G    E M L+GDV GKVA+++  + DT  T+A  A +L  +GA  V+A  +H
Sbjct:  146 VDNLYAEPLIVKYIEKHYKHLGEKVVISPAVDGVKRAKLVSDKLN-CDLAILDRQTKGDK--EDMILVGDVSGKVAIIIGSIADTCETLALSAKILKSKGATNVFALVSH 252          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS_MYCLE (Ribose-phosphate pyrophosphokinase OS=Mycobacterium leprae GN=prs PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.816e-13
Identity = 43/114 (37.72%), Postives = 65/114 (57.02%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMN--LIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAV 336
            VDH+  Q ++  Y+ +    +N +VVVSPD G V  A  +   L   PLA + K R      +V++  ++G+V+G+  V++DDMIDT GT+A    LL  +GA +V    TH V
Sbjct:  151 VDHMRGQNLLTGYIKNNYPDTN-MVVVSPDSGRVRIAEKWGDALGGVPLAFIHKTRDLRVPNQVVSNRVVGEVEGRTCVLIDDMIDTGGTVAGAVQLLRNDGASDVIIAATHGV 263          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS2_LACLA (Ribose-phosphate pyrophosphokinase 2 OS=Lactococcus lactis subsp. lactis GN=prs2 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13
Identity = 40/113 (35.40%), Postives = 67/113 (59.29%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAVF 339
            VD+++  P+  DY     +  +D++VV+P   G+ RAR+ A+ L  A +AIVD      N  E   +IG+V GK  +++DD+++T  T A  A ++ + GA E+YA  +H +F
Sbjct:  146 VDNLFTVPLFADYYRKSGLFGDDVIVVAPKNSGIKRARSLAEYLESA-IAIVDYEDDDKN-RENGYVIGNVSGKKVILIDDILNTGVTFANAANVVREAGASEIYAVASHGLF 256          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS2_ARCFU (Ribose-phosphate pyrophosphokinase 2 OS=Archaeoglobus fulgidus GN=prs2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 1
Query:   22 PVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAV 336
            P++ +Y A K     D+V++SPD G + R +  AK  +      ++KRR      E+     DV+G+  V+VDD+I T GT+A+ A +L+  GA+ V A C HAV
Sbjct:  133 PLVGEYFAGK-----DVVMISPDKGSMERVKTAAKH-AGCEWDYMEKRRIDATTVEITPKTIDVEGRDVVIVDDIISTGGTVAEAARILYGLGAKSVSAACVHAV 231          
The following BLAST results are available for this feature:
BLAST of DY258200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
KPRS2_STRA51.493e-1437.17Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]
KPRS2_STRA31.493e-1437.17Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]
KPRS2_ENTFA3.326e-1438.39Ribose-phosphate pyrophosphokinase 2 OS=Enterococc... [more]
KPR1_CANAL4.344e-1436.61Ribose-phosphate pyrophosphokinase 1 OS=Candida al... [more]
KPRS_DEIRA5.674e-1431.79Probable ribose-phosphate pyrophosphokinase OS=Dei... [more]
PRPSB_DICDI7.410e-1436.00Ribose-phosphate pyrophosphokinase B OS=Dictyostel... [more]
PRPSC_DICDI1.264e-1339.09Ribose-phosphate pyrophosphokinase C OS=Dictyostel... [more]
KPRS_MYCLE2.816e-1337.72Ribose-phosphate pyrophosphokinase OS=Mycobacteriu... [more]
KPRS2_LACLA6.273e-1335.40Ribose-phosphate pyrophosphokinase 2 OS=Lactococcu... [more]
KPRS2_ARCFU7.668e-1137.14Ribose-phosphate pyrophosphokinase 2 OS=Archaeoglo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3CC05ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258200 ID=DY258200; Name=DY258200; organism=Citrus clementina; type=EST; length=919bp
GTGGACCATGTATACTGTCAGCCTGTGATTCTTGATTACCTTGCTAGCAA
GACGGTTTCTTCTAATGATTTGGTGGTGGTTTCACCTGATGTCGGTGGAG
TGGCAAGAGCACGTGCTTTTGCCAAAAAGTTATCTGATGCTCCTTTAGCC
ATAGTAGATAAAAGGCGTCATGGACACAATGTTGCAGAGGTGATGAACCT
TATTGGCGATGTAAAAGGAAAAGTTGCAGTAATGGTGGATGACATGATTG
ACACTGCTGGGACTATTGCAAAAGGTGCAGCTCTTTTACATCAAGAAGGG
GCCAGGGAAGTTTATGCATGCTGCACGCATGCAGTTTTCAGGTTGGATTA
CAAATCATAAATTTATCAACTTGATCTCTTTTGACCCATTAACATTCCGA
CAAATAGATTAGATCGCAATTCTGATTCTTTTGCCATCACCTTCTGATAC
TTCCTTGGTCGAGCATCTATTCAACACCTGATGATGAGGAGAGGGTGACA
GCCCCTAACTAGAGGAAGAACCTCGGGGTATCAAGCCAGATGAAAGCTCC
CTCCTGCAATAGAGAGGTTGTCAGGTGGCCTGTTTCAAGAGGTGATCGTT
ACAAATACAATCCCAGTGGCAGAGAAGAACTACTTCCCTGAGTTGACTGT
TCTTTCTATAGCCAACCTGTTGGGTGAGACTATATGGCGTGTTCACGATG
ATTGTTCCGTAAGTAGCATTTTTCAATGAAGTCAGGGAGATATCGAGTGA
TGGTAGCTGCTTCAACTGGTAAAAGGCGTAGAATCGAGTAGGTCTCATAT
CTTTAGGTAGTCTAGCATAAGGGGAAAATTAATCTTATATGCTTTCTCAT
TTGTTAATTTTAATTTTCACTACATTTTTATTGGGCATTAAAGTTTCATC
ATGAATGATGATTCCCATT
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