DY258200

Overview
NameDY258200
Unique NameDY258200
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length919
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15384 contig Ccv1_Contig15384:319..1237. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS_STAAS (Ribose-phosphate pyrophosphokinase OS=Staphylococcus aureus (strain MSSA476) GN=prs PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.592e-24
Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASK-TVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAV 336
            +DH+   P++  +      ++  + VVVSPD GGV RAR  A  L   P+AI+DKRR   NVAEVMN++G+++G+ A+++DD+IDTAGTI   A  L  +GA+EVYACCTH V
Sbjct:  149 IDHLMGVPILAKHFKDDPNINPEECVVVSPDHGGVTRARKLADILK-TPIAIIDKRRPRPNVAEVMNIVGEIEGRTAIIIDDIIDTAGTITLAAQALKDKGAKEVYACCTHPV 260          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS_STAAR (Ribose-phosphate pyrophosphokinase OS=Staphylococcus aureus (strain MRSA252) GN=prs PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.592e-24
Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASK-TVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAV 336
            +DH+   P++  +      ++  + VVVSPD GGV RAR  A  L   P+AI+DKRR   NVAEVMN++G+++G+ A+++DD+IDTAGTI   A  L  +GA+EVYACCTH V
Sbjct:  149 IDHLMGVPILAKHFKDDPNINPEECVVVSPDHGGVTRARKLADILK-TPIAIIDKRRPRPNVAEVMNIVGEIEGRTAIIIDDIIDTAGTITLAAQALKDKGAKEVYACCTHPV 260          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS_STAAN (Ribose-phosphate pyrophosphokinase OS=Staphylococcus aureus (strain N315) GN=prs PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.592e-24
Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASK-TVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAV 336
            +DH+   P++  +      ++  + VVVSPD GGV RAR  A  L   P+AI+DKRR   NVAEVMN++G+++G+ A+++DD+IDTAGTI   A  L  +GA+EVYACCTH V
Sbjct:  149 IDHLMGVPILAKHFKDDPNINPEECVVVSPDHGGVTRARKLADILK-TPIAIIDKRRPRPNVAEVMNIVGEIEGRTAIIIDDIIDTAGTITLAAQALKDKGAKEVYACCTHPV 260          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS_STAAM (Ribose-phosphate pyrophosphokinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=prs PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.592e-24
Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASK-TVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAV 336
            +DH+   P++  +      ++  + VVVSPD GGV RAR  A  L   P+AI+DKRR   NVAEVMN++G+++G+ A+++DD+IDTAGTI   A  L  +GA+EVYACCTH V
Sbjct:  149 IDHLMGVPILAKHFKDDPNINPEECVVVSPDHGGVTRARKLADILK-TPIAIIDKRRPRPNVAEVMNIVGEIEGRTAIIIDDIIDTAGTITLAAQALKDKGAKEVYACCTHPV 260          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS_STAAC (Ribose-phosphate pyrophosphokinase OS=Staphylococcus aureus (strain COL) GN=prs PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.592e-24
Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASK-TVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAV 336
            +DH+   P++  +      ++  + VVVSPD GGV RAR  A  L   P+AI+DKRR   NVAEVMN++G+++G+ A+++DD+IDTAGTI   A  L  +GA+EVYACCTH V
Sbjct:  149 IDHLMGVPILAKHFKDDPNINPEECVVVSPDHGGVTRARKLADILK-TPIAIIDKRRPRPNVAEVMNIVGEIEGRTAIIIDDIIDTAGTITLAAQALKDKGAKEVYACCTHPV 260          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS_CAMJE (Ribose-phosphate pyrophosphokinase OS=Campylobacter jejuni GN=prs PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.715e-24
Identity = 60/112 (53.57%), Postives = 78/112 (69.64%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAV 336
            VD++Y   V  DY+ +K   +   ++ SPD+GGVARAR+ AK L    + IVDKRR   N +EVMN+IGDVK K  ++VDD+IDTAGTI K A  L ++GA+ V ACCTHAV
Sbjct:  142 VDNLYGSIVFNDYIKAKHFKN--AIIGSPDIGGVARARSVAKHLG-LDIVIVDKRREKANESEVMNIIGDVKDKEVILVDDIIDTAGTIVKAAEALKEKGAKSVMACCTHAV 250          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS_STAHJ (Ribose-phosphate pyrophosphokinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=prs PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.546e-24
Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASK-TVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAV 336
            +DH+   P+I  +  +   +   + VVVSPD GGV RAR  A  L   P+AI+DKRR   NVAEVMN++G+++G+ A+++DD+IDTAGTI   A  L  +GA++VYACCTH V
Sbjct:  149 IDHLMGVPIIGQHFENDPNIDPEECVVVSPDHGGVTRARKLADILK-TPIAIIDKRRPKPNVAEVMNIVGEIEGRTAIIIDDIIDTAGTITLAAQALKDKGAKDVYACCTHPV 260          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS_CHLTE (Ribose-phosphate pyrophosphokinase OS=Chlorobium tepidum GN=prs PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.546e-24
Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = 1
Query:    4 DHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAV 336
            DH+Y   V++D++ +  ++ N LVV SPDVGGV  AR FA +L    L IVDKRR   NVAEVMN+IGDVKGK  ++VDDMIDTAGTI   A  + + G  ++YA  TH +
Sbjct:  143 DHLYSSVVLIDHVKNMDIADN-LVVASPDVGGVKLARKFASELG-TELVIVDKRRPKANVAEVMNIIGDVKGKNVLLVDDMIDTAGTIVNAAKAIKEAGGLKIYAAATHPI 251          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS1_STRA5 (Ribose-phosphate pyrophosphokinase 1 OS=Streptococcus agalactiae serotype V GN=prs1 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.631e-24
Identity = 60/114 (52.63%), Postives = 77/114 (67.54%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRH--GHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAV 336
            VDH+   P+I DY   + +  +D+VVVSPD GGV RAR  A+ L   P+AI+DKRR     N +EVMN+IG++KGK  +++DDMIDTAGTI   A  L + GA  VYA CTH V
Sbjct:  144 VDHLMGAPLIADYFDRQGLVGDDVVVVSPDHGGVTRARKLAQCLK-TPIAIIDKRRSVTKMNTSEVMNIIGNIKGKKCILIDDMIDTAGTICHAADALAEAGATAVYASCTHPV 256          
BLAST of DY258200 vs. ExPASy Swiss-Prot
Match: KPRS1_STRA3 (Ribose-phosphate pyrophosphokinase 1 OS=Streptococcus agalactiae serotype III GN=prs1 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.631e-24
Identity = 60/114 (52.63%), Postives = 77/114 (67.54%), Query Frame = 1
Query:    1 VDHVYCQPVILDYLASKTVSSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRH--GHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACCTHAV 336
            VDH+   P+I DY   + +  +D+VVVSPD GGV RAR  A+ L   P+AI+DKRR     N +EVMN+IG++KGK  +++DDMIDTAGTI   A  L + GA  VYA CTH V
Sbjct:  144 VDHLMGAPLIADYFDRQGLVGDDVVVVSPDHGGVTRARKLAQCLK-TPIAIIDKRRSVTKMNTSEVMNIIGNIKGKKCILIDDMIDTAGTICHAADALAEAGATAVYASCTHPV 256          
The following BLAST results are available for this feature:
BLAST of DY258200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
KPRS_STAAS1.592e-2449.56Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_STAAR1.592e-2449.56Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_STAAN1.592e-2449.56Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_STAAM1.592e-2449.56Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_STAAC1.592e-2449.56Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_CAMJE2.715e-2453.57Ribose-phosphate pyrophosphokinase OS=Campylobacte... [more]
KPRS_STAHJ3.546e-2449.56Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_CHLTE3.546e-2453.15Ribose-phosphate pyrophosphokinase OS=Chlorobium t... [more]
KPRS1_STRA54.631e-2452.63Ribose-phosphate pyrophosphokinase 1 OS=Streptococ... [more]
KPRS1_STRA34.631e-2452.63Ribose-phosphate pyrophosphokinase 1 OS=Streptococ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3CC05ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258200 ID=DY258200; Name=DY258200; organism=Citrus clementina; type=EST; length=919bp
GTGGACCATGTATACTGTCAGCCTGTGATTCTTGATTACCTTGCTAGCAA
GACGGTTTCTTCTAATGATTTGGTGGTGGTTTCACCTGATGTCGGTGGAG
TGGCAAGAGCACGTGCTTTTGCCAAAAAGTTATCTGATGCTCCTTTAGCC
ATAGTAGATAAAAGGCGTCATGGACACAATGTTGCAGAGGTGATGAACCT
TATTGGCGATGTAAAAGGAAAAGTTGCAGTAATGGTGGATGACATGATTG
ACACTGCTGGGACTATTGCAAAAGGTGCAGCTCTTTTACATCAAGAAGGG
GCCAGGGAAGTTTATGCATGCTGCACGCATGCAGTTTTCAGGTTGGATTA
CAAATCATAAATTTATCAACTTGATCTCTTTTGACCCATTAACATTCCGA
CAAATAGATTAGATCGCAATTCTGATTCTTTTGCCATCACCTTCTGATAC
TTCCTTGGTCGAGCATCTATTCAACACCTGATGATGAGGAGAGGGTGACA
GCCCCTAACTAGAGGAAGAACCTCGGGGTATCAAGCCAGATGAAAGCTCC
CTCCTGCAATAGAGAGGTTGTCAGGTGGCCTGTTTCAAGAGGTGATCGTT
ACAAATACAATCCCAGTGGCAGAGAAGAACTACTTCCCTGAGTTGACTGT
TCTTTCTATAGCCAACCTGTTGGGTGAGACTATATGGCGTGTTCACGATG
ATTGTTCCGTAAGTAGCATTTTTCAATGAAGTCAGGGAGATATCGAGTGA
TGGTAGCTGCTTCAACTGGTAAAAGGCGTAGAATCGAGTAGGTCTCATAT
CTTTAGGTAGTCTAGCATAAGGGGAAAATTAATCTTATATGCTTTCTCAT
TTGTTAATTTTAATTTTCACTACATTTTTATTGGGCATTAAAGTTTCATC
ATGAATGATGATTCCCATT
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