DY258207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 4.193e-32 Identity = 72/165 (43.64%), Postives = 101/165 (61.21%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF----EEIAKRL 752 KL+L+GDSGVGKSC++LRF + + T+G F +TI L D T+K +IWDTAGQER+ + YYRG YD+T +SFN + W++E+ ++ S ++ LVGNK DL K+ V E+A+ G+ F+ETSAK A N+ Q F EI KR+ Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 176
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 4.193e-32 Identity = 72/165 (43.64%), Postives = 101/165 (61.21%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF----EEIAKRL 752 KL+L+GDSGVGKSC++LRF + + T+G F +TI L D T+K +IWDTAGQER+ + YYRG YD+T +SFN + W++E+ ++ S ++ LVGNK DL K+ V E+A+ G+ F+ETSAK A N+ Q F EI KR+ Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 176
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 4.193e-32 Identity = 72/165 (43.64%), Postives = 101/165 (61.21%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF----EEIAKRL 752 KL+L+GDSGVGKSC++LRF + + T+G F +TI L D T+K +IWDTAGQER+ + YYRG YD+T +SFN + W++E+ ++ S ++ LVGNK DL K+ V E+A+ G+ F+ETSAK A N+ Q F EI KR+ Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 176
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 4.193e-32 Identity = 72/165 (43.64%), Postives = 101/165 (61.21%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF----EEIAKRL 752 KL+L+GDSGVGKSC++LRF + + T+G F +TI L D T+K +IWDTAGQER+ + YYRG YD+T +SFN + W++E+ ++ S ++ LVGNK DL K+ V E+A+ G+ F+ETSAK A N+ Q F EI KR+ Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 176
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 4.193e-32 Identity = 66/161 (40.99%), Postives = 95/161 (59.01%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 752 K+V++GDS VGKS ++ R+ R +F+P SK T+G F +Q++ + D VK +IWDTAGQER+ A+ YYRG YDIT +F W+ EL H + L+GNK DL R V ++G AE G+FF+ETSA + N+ FE + + + Sbjct: 14 KIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLI-DGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREI 173
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 5.477e-32 Identity = 69/172 (40.12%), Postives = 104/172 (60.47%), Query Frame = 3 Query: 243 SSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 758 + D + KLVL+GDSGVGKS ++ RF + +F+ SK T+G F ++++ + D+ +K +IWDTAGQERY A+ YYRG YD+T ++ W+KEL+ H P+IV+ L+GNK+DL V + AE+ G++F+ETSA A N+ F E ++ R Sbjct: 6 ADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNI-DNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYR 176
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: YPT32_YEAST (GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae GN=YPT32 PE=1 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 5.477e-32 Identity = 65/157 (41.40%), Postives = 100/157 (63.69%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEI 740 K+VL+GDSGVGKS ++ RF +F+ SK T+G F ++TI +++ +K +IWDTAGQERY A+ YYRG YDI+ S+ +W+ EL+++ ++ + L+GNK+DL R VP + +A +N M F ETSA +DN+++ F E+ Sbjct: 15 KIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKK-IKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFREL 170
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 5.477e-32 Identity = 69/163 (42.33%), Postives = 100/163 (61.35%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 758 KL+L+GDSGVGKSC++LRF + + T+G F +TI L D T+K +IWDTAGQER+ + YYRG YD+T +SFN + W+ E+ ++ ++ LVGNK+DL KR V E+AE G+ F+ETSAK A N+ + F +A ++ + Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKK 171
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 5.477e-32 Identity = 69/163 (42.33%), Postives = 100/163 (61.35%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 758 KL+L+GDSGVGKSC++LRF + + T+G F QTI L D T+K +IWDTAGQER+ + YYRG YD+T +S+ + W++E+ +H S ++ LVGNK+DL K+ V E+A+ G+ F+ETSAK A N+ Q F +A + + Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIEL-DGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKK 171
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RBH1C_ARATH (Ras-related protein RABH1C OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 7.153e-32 Identity = 70/165 (42.42%), Postives = 105/165 (63.64%), Query Frame = 3 Query: 264 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKH-GSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 755 + KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAGQER+ +L P Y R YD+++ +F W++++ + G ++++ LVGNK DL EKR+V +G + ++ G+ FIETSAK NI LF +IA LP Sbjct: 9 KFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRT-VRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALP 172 The following BLAST results are available for this feature:
BLAST of DY258207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258207 ID=DY258207; Name=DY258207; organism=Citrus clementina; type=EST; length=1033bpback to top |