DY258207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.220e-31 Identity = 68/159 (42.77%), Postives = 97/159 (61.01%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 746 KL+L+GDSGVGK+C + RF F+ T T+G F +TI L D +K +IWDTAGQER+ + YYRG YDIT+ SF + WV+ +++H SPD+ ++GNK D ++KR+V + G + A G+ F+ETSAK NI F +A+ Sbjct: 10 KLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIEL-DGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLAR 167
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB6_DICDI (Ras-related protein Rab-6 OS=Dictyostelium discoideum GN=rab6 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.220e-31 Identity = 70/164 (42.68%), Postives = 102/164 (62.20%), Query Frame = 3 Query: 264 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 755 + KLV LGD VGK+ I+ RF+ FD T + T+G FLS+T+ L+D T V+ ++WDTAGQER+ +L P Y R YDIT+ SF W+++++ ++V+ LVGNK DL +KR+V ++G A++ + F ETSAK NI LF ++A LP Sbjct: 6 KYKLVFLGDQSVGKTSIITRFMYDTFDITYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDITNKVSFTNTIKWIEDVRNERGNNVVIMLVGNKTDLADKRQVSIEEGEAKAKEYDIMFTETSAKAGFNIKALFRKVASALP 168
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB17_HUMAN (Ras-related protein Rab-17 OS=Homo sapiens GN=RAB17 PE=1 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 1.220e-31 Identity = 71/162 (43.83%), Postives = 107/162 (66.05%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSP-DIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 752 KLVLLG VGKS + LR+V+ F TVG +F ++ + + +T++K EIWDTAGQE+Y ++ LY+RG YDIT DSF KAQ W+K+L++ P ++++ LVGNK DL ++REV Q+G E+A+ + F+ETSAK ++++F +A+ L Sbjct: 21 KLVLLGSGSVGKSSLALRYVKNDFKSILP-TVGCAFFTKVVDV-GATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQEL 180
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.220e-31 Identity = 71/176 (40.34%), Postives = 104/176 (59.09%), Query Frame = 3 Query: 258 NLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF----EEIAKRLPRPSPSS 773 +L KL+L+GDSGVGK+C++ RF F+ T T+G F +T+ LQ +K +IWDTAGQER+ + YYRG YDIT+ SF W++ + +H + D+ L+GNK D+ +KR VP G + A ++G+ F ETSAK NI + F E+I ++ P P+S Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK-IKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNS 181
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.220e-31 Identity = 71/176 (40.34%), Postives = 104/176 (59.09%), Query Frame = 3 Query: 258 NLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF----EEIAKRLPRPSPSS 773 +L KL+L+GDSGVGK+C++ RF F+ T T+G F +T+ LQ +K +IWDTAGQER+ + YYRG YDIT+ SF W++ + +H + D+ L+GNK D+ +KR VP G + A ++G+ F ETSAK NI + F E+I ++ P P+S Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK-IKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNS 181
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB10_HUMAN (Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.220e-31 Identity = 71/176 (40.34%), Postives = 104/176 (59.09%), Query Frame = 3 Query: 258 NLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF----EEIAKRLPRPSPSS 773 +L KL+L+GDSGVGK+C++ RF F+ T T+G F +T+ LQ +K +IWDTAGQER+ + YYRG YDIT+ SF W++ + +H + D+ L+GNK D+ +KR VP G + A ++G+ F ETSAK NI + F E+I ++ P P+S Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK-IKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNS 181
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB10_CANFA (Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.220e-31 Identity = 71/176 (40.34%), Postives = 104/176 (59.09%), Query Frame = 3 Query: 258 NLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF----EEIAKRLPRPSPSS 773 +L KL+L+GDSGVGK+C++ RF F+ T T+G F +T+ LQ +K +IWDTAGQER+ + YYRG YDIT+ SF W++ + +H + D+ L+GNK D+ +KR VP G + A ++G+ F ETSAK NI + F E+I ++ P P+S Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK-IKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKEPNS 181
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.593e-31 Identity = 67/171 (39.18%), Postives = 109/171 (63.74%), Query Frame = 3 Query: 234 NAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 746 ++G+ + + +K++L+GDSGVGKSC+++RFV +F+P+ T+G F +T+ + + VK ++WDTAGQER+ + YYRG YD+T +F + W K + +H + + + LVGNK+D+ E R V A G A++ G+ FIE+SAK DN+N++F +AK Sbjct: 10 SSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI-NGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAK 178
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB4_DICDI (Ras-related protein Rab-4 OS=Dictyostelium discoideum GN=rab4 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.593e-31 Identity = 63/155 (40.65%), Postives = 98/155 (63.23%), Query Frame = 3 Query: 267 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF 731 VK +++G VGKSC++ RF+ +F S T+G F S+ + +Q VK +IWDTAGQER+ ++ YYRG YD+T+ +S+N W+ +++ SPD+ + LVGNKADL E+REV + A++NG+ F+ETSA T + + ++F Sbjct: 8 VKFIIIGSQSVGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKN-VKLQIWDTAGQERFRSVVISYYRGSAGVALVYDVTNRESYNHITNWLSDVKSLASPDVTIILVGNKADLTEQREVTFLEASRIAQENGLLFMETSALTGEGVEEMF 161
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.593e-31 Identity = 61/158 (38.61%), Postives = 104/158 (65.82%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIA 743 K +++GD+GVGKSC++L+F +F P +T+G F ++ I + D+ +K +IWDTAGQE + ++ YYRG YDIT ++FN W+++ ++H + ++ + LVGNK DL +R V ++G ++A+++G+ F+E SAKTA N+ + F + A Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI-DNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTA 164 The following BLAST results are available for this feature:
BLAST of DY258207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258207 ID=DY258207; Name=DY258207; organism=Citrus clementina; type=EST; length=1033bpback to top |