DY258207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RB11A_PIG (Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 9.027e-35 Identity = 74/163 (45.40%), Postives = 103/163 (63.19%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 758 K+VL+GDSGVGKS ++ RF R +F+ SK T+G F +++I + D T+K +IWDTAGQERY A+ YYRG YDI ++ + W+KEL+ H +IV+ LVGNK+DL R VP + +AEKNG+ FIETSA + N+ F+ I + R Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYR 174
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RB11A_MOUSE (Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 9.027e-35 Identity = 74/163 (45.40%), Postives = 103/163 (63.19%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 758 K+VL+GDSGVGKS ++ RF R +F+ SK T+G F +++I + D T+K +IWDTAGQERY A+ YYRG YDI ++ + W+KEL+ H +IV+ LVGNK+DL R VP + +AEKNG+ FIETSA + N+ F+ I + R Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYR 174
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 9.027e-35 Identity = 74/163 (45.40%), Postives = 103/163 (63.19%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 758 K+VL+GDSGVGKS ++ RF R +F+ SK T+G F +++I + D T+K +IWDTAGQERY A+ YYRG YDI ++ + W+KEL+ H +IV+ LVGNK+DL R VP + +AEKNG+ FIETSA + N+ F+ I + R Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYR 174
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 9.027e-35 Identity = 74/163 (45.40%), Postives = 103/163 (63.19%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 758 K+VL+GDSGVGKS ++ RF R +F+ SK T+G F +++I + D T+K +IWDTAGQERY A+ YYRG YDI ++ + W+KEL+ H +IV+ LVGNK+DL R VP + +AEKNG+ FIETSA + N+ F+ I + R Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYR 174
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 9.027e-35 Identity = 74/163 (45.40%), Postives = 103/163 (63.19%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 758 K+VL+GDSGVGKS ++ RF R +F+ SK T+G F +++I + D T+K +IWDTAGQERY A+ YYRG YDI ++ + W+KEL+ H +IV+ LVGNK+DL R VP + +AEKNG+ FIETSA + N+ F+ I + R Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYR 174
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 1.179e-34 Identity = 73/163 (44.79%), Postives = 104/163 (63.80%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 758 K+VL+GDS VGKS ++ RF R +F+ SK T+G F ++T+ + D+ TVK +IWDTAGQERY A+ YYRG YDIT SF+ W++EL+ H +IV+ L+GNK+DL R VP +D E+AE+ +FF+ETSA + N+ F + + R Sbjct: 20 KVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHI-DARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYR 181
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.540e-34 Identity = 69/161 (42.86%), Postives = 106/161 (65.84%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 752 K+VL+G++GVGK+C+V RF +G F P T+G F+ +T+ + + VK +IWDTAGQER+ ++ YYR YDIT +SF W++E++++ S ++ LVGNK DL E+REV Q E++E M+++ETSAK +DN+ +LF ++A RL Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEI-NGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 170
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 1.540e-34 Identity = 69/161 (42.86%), Postives = 106/161 (65.84%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 752 K+VL+G++GVGK+C+V RF +G F P T+G F+ +T+ + + VK +IWDTAGQER+ ++ YYR YDIT +SF W++E++++ S ++ LVGNK DL E+REV Q E++E M+++ETSAK +DN+ +LF ++A RL Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEI-NGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 170
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.540e-34 Identity = 69/161 (42.86%), Postives = 106/161 (65.84%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 752 K+VL+G++GVGK+C+V RF +G F P T+G F+ +T+ + + VK +IWDTAGQER+ ++ YYR YDIT +SF W++E++++ S ++ LVGNK DL E+REV Q E++E M+++ETSAK +DN+ +LF ++A RL Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEI-NGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 170
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.540e-34 Identity = 75/183 (40.98%), Postives = 112/183 (61.20%), Query Frame = 3 Query: 204 GQSGGLNNLENAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 752 G SG + S+ ++L K +++GDS VGKS ++L+FV +F P S T+G F S++I + D +K +IWDTAGQE++ ++ YYRG YDIT DSF W+ + +K S D+ L+GNKADL R+V + E+AEKNG+ F ETSAKTA N+++ FE+ +++ Sbjct: 5 GSSGEKPTFNDRKSTSYEHL-FKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQ-IKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQI 185 The following BLAST results are available for this feature:
BLAST of DY258207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258207 ID=DY258207; Name=DY258207; organism=Citrus clementina; type=EST; length=1033bpback to top |