DY258211

Overview
NameDY258211
Unique NameDY258211
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length881
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1057 contig Ccv1_Contig1057:1..881. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258211 vs. ExPASy Swiss-Prot
Match: CB5D2_XENTR (Cytochrome b5 domain-containing protein 2 OS=Xenopus tropicalis GN=cyb5d2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.128e-14
Identity = 39/122 (31.97%), Postives = 68/122 (55.74%), Query Frame = 1
Query:  295 VIPETVQLGE---VTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVS---EQTSKPTK 642
            + P+  +L E   +++ EL  YDG   +  + +AI GQ++DV +    YGPGG Y+ FAG+DASRA     F  + L  ++  LS  ++  L +W   + + Y+ +G++     +++  PTK
Sbjct:   34 IFPQQCELSEGRLMSKEELSVYDGGPGSSGIYLAILGQVFDVHKGSKHYGPGGSYSFFAGKDASRAYMTGDFTEKGLVDDVTELSPLQMLHLHNWLSFYQQNYITIGKLTGRFYDESGNPTK 155          
BLAST of DY258211 vs. ExPASy Swiss-Prot
Match: CB5D2_CAEBR (Cytochrome b5 domain-containing protein 2 homolog OS=Caenorhabditis briggsae GN=tag-131 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13
Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 1
Query:  328 TEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQI 612
            T  +L  +DGS  +KP  +AI G++YDV   + +YGPG  Y  FAGRDA+RA     F    L  +  GLS  EL  ++DW   + ++Y  VG +
Sbjct:  102 TPEQLHFFDGSRDSKPCYLAILGRVYDVDGKKEYYGPGKSYHHFAGRDATRAFTTGDFTENGLVASTHGLSHDELLSIRDWVSFYDKEYPLVGVV 196          
BLAST of DY258211 vs. ExPASy Swiss-Prot
Match: CB5D2_MOUSE (Cytochrome b5 domain-containing protein 2 OS=Mus musculus GN=Cyb5d2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12
Identity = 39/93 (41.94%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  337 ELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIV 615
            EL  Y G   +  L +A+ G++YDVS  R  Y PG  Y+ FAGRDASRA     +    L  +I GLS SE+  L +W   + + YV VG++V
Sbjct:   42 ELARYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGAHYSGFAGRDASRAFVTGDYSEAGLVDDINGLSSSEILTLHNWLSFYEKNYVFVGRLV 134          
BLAST of DY258211 vs. ExPASy Swiss-Prot
Match: CB5D2_CAEEL (Cytochrome b5 domain-containing protein 2 homolog OS=Caenorhabditis elegans GN=tag-131 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12
Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 1
Query:  328 TEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQI 612
            T  +L  +DG+  +KP+ +AI G++Y+V   + +YGPG  Y  FAGRDA+RA     F    L     GLS  EL  ++DW   + ++Y  VG +
Sbjct:  102 TPEQLHFFDGTRDSKPIYLAILGRVYNVDGKKEYYGPGKSYHHFAGRDATRAFTTGDFQESGLIATTHGLSHDELLSIRDWVSFYDKEYPLVGVV 196          
BLAST of DY258211 vs. ExPASy Swiss-Prot
Match: CB5D2_RAT (Cytochrome b5 domain-containing protein 2 OS=Rattus norvegicus GN=Cyb5d2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.717e-12
Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  337 ELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIV 615
            EL  Y G   +  L +A+ G++YDVS  R  Y PG  Y+ FAGRDASRA     +    L  ++ GLS SE+  L +W   + + YV VG+++
Sbjct:   42 ELARYRGGPGDPGLYLALLGRVYDVSSGRKHYEPGAHYSGFAGRDASRAFVTGDYSEAGLVDDVNGLSSSEILTLHNWLSFYEKNYVFVGRLI 134          
The following BLAST results are available for this feature:
BLAST of DY258211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
CB5D2_XENTR3.128e-1431.97Cytochrome b5 domain-containing protein 2 OS=Xenop... [more]
CB5D2_CAEBR2.028e-1340.00Cytochrome b5 domain-containing protein 2 homolog ... [more]
CB5D2_MOUSE1.006e-1241.94Cytochrome b5 domain-containing protein 2 OS=Mus m... [more]
CB5D2_CAEEL1.006e-1237.89Cytochrome b5 domain-containing protein 2 homolog ... [more]
CB5D2_RAT1.717e-1239.78Cytochrome b5 domain-containing protein 2 OS=Rattu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3CD11ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258211 ID=DY258211; Name=DY258211; organism=Citrus clementina; type=EST; length=881bp
GCGGGGGAGCTTTGTTCTTCTTTTAAAATTAAATTAAAGAAAAAGAAGAC
CCAAATTAATTAAGAAGCTTACACAATGGTGGCGTTTTTCGCAGCGGTGA
TGGACACGGTCACCACCTACACCGGACTATCACCGGCGGCTTTCTTCACA
ATCCTGGCCCTTATGTGCGTGGTTTATAAAACGGTTTGTAGCATGTTCGT
TGACCCAGAGCCGCCAGAAGACTTGAAGAACAAGCTCATCAGCTCCAGCG
CCGCGGCGTCGGCGGCGACGGCGGCTAACTTTTCGAACCAAACGGTGATC
CCCGAAACGGTGCAGCTAGGAGAAGTCACTGAACATGAGTTGAGAGCTTA
TGATGGTTCTGACCCTAATAAGCCTCTTTTGATGGCTATCAAGGGACAAA
TCTACGACGTCTCTCGCTCCAGGATGTTCTATGGACCTGGAGGGCCATAT
GCAATGTTTGCTGGAAGGGACGCCAGTAGAGCCTTAGCTCTTATGTCTTT
TGACCCTCAAGACCTAACTGGGAATATTGAAGGCCTTAGTGATTCTGAGC
TTGAAGTTCTGCAAGATTGGGAATATAAATTCATGGAAAAATATGTCAAA
GTTGGCCAGATTGTCTCGGAACAAACAAGCAAACCCACCAAGAATGGAGA
TAAAGTACCTGAGAATCAAAACCACGACGGTGCCTAAGCACAATAGAAGT
TATATTTATTGGTGTACTCAGCAAAACAAAGACGGTGCAGAAACACAATA
GAAGTTATATTTATTTTTGTACTCTTCAAATGGTTACTTTTCTGCTTCCT
TCCATTGCTTATGTATCTTAGTTCACTCCTCTTTTCTCCTCTTGTATAAT
CTTTTGCCTTCTATAAATCACATTTAGCCTG
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