DY258215

Overview
NameDY258215
Unique NameDY258215
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length891
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258215 vs. ExPASy Swiss-Prot
Match: NACA_ASPOR (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus oryzae GN=egd2 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.195e-18
Identity = 57/152 (37.50%), Postives = 83/152 (54.61%), Query Frame = 2
Query:  284 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMP--------------DMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 697
            A+ KLG+K V G++RVT++R KNILF I++PDV++SP+S T++IFGEAKIED                              D+G+ + + +                        +DI+LVM QA VSR KAVKAL+ ++ DIV++IM L+
Sbjct:   54 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHEHDLGTKVPEAE----TKKEEEEDDGEPVDESGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 201          
BLAST of DY258215 vs. ExPASy Swiss-Prot
Match: NACA_GIBZE (Nascent polypeptide-associated complex subunit alpha OS=Gibberella zeae GN=EGD2 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.057e-17
Identity = 56/151 (37.09%), Postives = 77/151 (50.99%), Query Frame = 2
Query:  284 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRM-------------PDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 697
            A+ KL +  + G++RVT++R KNILF I+ P+V+KSPNS TY++FGEAKIED                            P       +                          +DI+LVMTQA VSR+KAVKALK ++ DIV++IM L+
Sbjct:   58 ALEKLHLTRIPGITRVTLRRPKNILFVINTPEVYKSPNSNTYIVFGEAKIEDVNAAAQQAAAAQLASQNAEDHSGHNHGEPSKAVEADEKKEDKEDDEDEEEEEEEEVDASGLEDKDIELVMTQANVSRNKAVKALKENDNDIVNSIMALS 208          
BLAST of DY258215 vs. ExPASy Swiss-Prot
Match: NACA_BABDI (Nascent polypeptide-associated complex subunit alpha OS=Babesia divergens PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.057e-17
Identity = 57/152 (37.50%), Postives = 77/152 (50.66%), Query Frame = 2
Query:  293 KLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVM----------------AKPDXXXXXXXXXXXXXXXXXXXXXXXPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELTT 700
            KLGMKPV GV++V IK++K I F ++KPDV+K PNS+TYVIFGEAK+ED             R+  + S +                A                            DIDLV++Q G +R +AV+AL  + GDIV  IM+L+T
Sbjct:   48 KLGMKPVDGVTKVCIKKSKQIYFVVNKPDVYKLPNSDTYVIFGEAKVEDMSQNSALEAAQ--RLSQLSSALQAVGADRGTDSSAAAHASGHDHAHDHDHSHGDCASKADESSVNQSDIDLVVSQVGCTREQAVEALIKNKGDIVETIMQLST 197          
BLAST of DY258215 vs. ExPASy Swiss-Prot
Match: NACA_BOTFB (Nascent polypeptide-associated complex subunit alpha OS=Botryotinia fuckeliana (strain B05.10) GN=egd2 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.849e-17
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 2
Query:  284 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPD----MGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDID----------LVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 697
            ++ KLG+  V G++RVT++R KNILF I++P+V+KSP S TY++FGEAKIED                +     G   +  D                         ++D          LVMTQA VSR+KAVKALK ++ DIV++IM L+
Sbjct:   60 SIAKLGLTRVPGITRVTLRRPKNILFVINQPEVYKSPTSNTYIVFGEAKIEDLNSQAQASAAAQLAAQESHDHAGHDHSGHDHSHDHGKGKAVDTEEKKEEEEDDTEEVDATGLEDKDIELVMTQASVSRNKAVKALKENDNDIVNSIMALS 211          
BLAST of DY258215 vs. ExPASy Swiss-Prot
Match: NACA_NEOFI (Nascent polypeptide-associated complex subunit alpha OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=egd2 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.526e-16
Identity = 56/149 (37.58%), Postives = 79/149 (53.02%), Query Frame = 2
Query:  284 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGS-VMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDID----------LVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 697
            A+ KLG+K V G++RVT++R KNILF I++PDV++SP+S T++IFGEAKIED                +  +   A  D                         ++D          LVM QA VSR KAVKAL+ ++ DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHDHDHGKGKAPETEAKKEEEEDDGEEVDETGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 203          
BLAST of DY258215 vs. ExPASy Swiss-Prot
Match: NACA_ASPFU (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus fumigatus GN=egd2 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.526e-16
Identity = 56/149 (37.58%), Postives = 79/149 (53.02%), Query Frame = 2
Query:  284 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGS-VMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDID----------LVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 697
            A+ KLG+K V G++RVT++R KNILF I++PDV++SP+S T++IFGEAKIED                +  +   A  D                         ++D          LVM QA VSR KAVKAL+ ++ DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHDHDHGKGKAPETEAKKEEEEDDGEEVDETGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 203          
BLAST of DY258215 vs. ExPASy Swiss-Prot
Match: NACA_ASPCL (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus clavatus GN=egd2 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.993e-16
Identity = 56/149 (37.58%), Postives = 78/149 (52.35%), Query Frame = 2
Query:  284 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGS-VMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDID----------LVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 697
            A+ KLG+K V G++RVT++R KNILF I++PDV++SP S T++IFGEAKIED                +  +   A  D                         ++D          LVM QA VSR KAVKAL+ ++ DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPTSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAAGEHAGHDHDHDHGKGKAPETEAKKEEEEDDGEEVDETGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 203          
BLAST of DY258215 vs. ExPASy Swiss-Prot
Match: NACA_ASPNC (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=egd2 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.399e-16
Identity = 56/148 (37.84%), Postives = 78/148 (52.70%), Query Frame = 2
Query:  284 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDID----------LVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 697
            A+ KLG+K V G++RVT++R KNILF I++PDV++SP+S T++IFGEAKIED                   +  A  D                         ++D          LVM QA VSR KAVKAL+ ++ DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNATAQATAAQQL-AEAAANEHAGHDHEHDHGKGKAPEAEAKKEEEEDDGEEVDESGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 201          
BLAST of DY258215 vs. ExPASy Swiss-Prot
Match: NACA_AJECN (Nascent polypeptide-associated complex subunit alpha OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=EGD2 PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.000e-13
Identity = 51/151 (33.77%), Postives = 77/151 (50.99%), Query Frame = 2
Query:  284 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDM--GSVMAKPDXXXXXXXXXXXXXXXXXXXXXXXPRDI---------DLVMTQA--GVSRSKAVKALKTHNGDIVSAIMELT 697
            A+ KLG+K V G++RVT++R K ILF I++PDV++SP+S T++IFGEAKIED                +    +  A  D                         ++         D+ +  A   VSR+KA+KALK ++ DIV++IM L+
Sbjct:   57 AIGKLGLKHVPGITRVTLRRPKGILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAGSNEHAGHDHASHDHGKGKAVESADKKDEEEDDEEVFDASGLEAKDIELVMAQASVSRNKAIKALKENDNDIVNSIMALS 207          
BLAST of DY258215 vs. ExPASy Swiss-Prot
Match: NACA_SCLS1 (Nascent polypeptide-associated complex subunit alpha OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=egd2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12
Identity = 31/52 (59.62%), Postives = 43/52 (82.69%), Query Frame = 2
Query:  284 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIED 439
            ++ KLG+  V G++RVT++R KNILF I+ P+V+KSP S TY++FGEAKIED
Sbjct:   61 SIAKLGLTRVPGITRVTLRRPKNILFVINNPEVYKSPTSNTYIVFGEAKIED 112          
The following BLAST results are available for this feature:
BLAST of DY258215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
NACA_ASPOR6.195e-1837.50Nascent polypeptide-associated complex subunit alp... [more]
NACA_GIBZE1.057e-1737.09Nascent polypeptide-associated complex subunit alp... [more]
NACA_BABDI1.057e-1737.50Nascent polypeptide-associated complex subunit alp... [more]
NACA_BOTFB6.849e-1736.84Nascent polypeptide-associated complex subunit alp... [more]
NACA_NEOFI1.526e-1637.58Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPFU1.526e-1637.58Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPCL1.993e-1637.58Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPNC3.399e-1637.84Nascent polypeptide-associated complex subunit alp... [more]
NACA_AJECN6.000e-1333.77Nascent polypeptide-associated complex subunit alp... [more]
NACA_SCLS16.634e-1259.62Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3CE06ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258215 ID=DY258215; Name=DY258215; organism=Citrus clementina; type=EST; length=891bp
GGAACAAAGTTATCCCTATCTATCGAGGCTAAACTAGAGAAAGCTTATCA
ATTTTATCAAAATGTCGCCACCAGCTCCCATCGTTGAGACACCAGTCGAG
GAACCTGAAAAAATTAAGCCTCAGGATGAGGATGAGCCTGTAGTTGAAGA
TGTTAAGGACGATGAGGAAGAAGATGATGACCACGACAATGACGATGATG
ACGAGGACGACGATGACAACAAAGACGATGGAGCTCAAGGAGGGAGTTCA
AAGCAGAGCAGAAGTGAGAAAAAGAGCCGCAAGGCAATGCTGAAGTTGGG
CATGAAACCTGTAACAGGAGTTAGCAGGGTAACCATCAAGAGAACCAAAA
ATATACTATTTTTCATCTCAAAGCCTGATGTTTTCAAGAGCCCAAATTCT
GAAACGTACGTCATATTTGGGGAAGCCAAAATAGAGGATTTGAGCTCCCA
GCTGCAGACACAGGCTGCCCAGCAGTTCAGGATGCCTGACATGGGATCGG
TGATGGCGAAACCAGATGCCTCTTCTGCTGCTGCTGGTGCACAACAAGAT
GAGGAAGAGGAGGAAGTTGATGAGACGGGAGTTGAGCCTCGGGACATTGA
TTTGGTCATGACACAGGCCGGTGTCTCAAGAAGCAAGGCTGTCAAAGCTC
TGAAGACACATAATGGAGACATTGTTAGTGCTATCATGGAGCTTACTACT
TGAGTAGATTTGCTTCCATGCAGTATTTTTCTGTCGATGAATTTAGTTAT
TGTAGTCGGTGAGATGACTGAATTACTACTCTATTTTTGTGCACTTAATG
CAATTTCTGTTGCAGATACAATTTCTTTTGCAGTGGGGATGAGAATCCTC
CTCGCTAGTTGTTTTAATGGTTAGTAATTGATCTTTCCATA
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