DY258237

Overview
NameDY258237
Unique NameDY258237
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length759
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1060 contig Ccv1_Contig1060:1..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258237 vs. ExPASy Swiss-Prot
Match: MPAC1_CARBE (Major pollen allergen Car b 1 isoforms 1A and 1B OS=Carpinus betulus PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 5.454e-30
Identity = 69/159 (43.40%), Postives = 97/159 (61.01%), Query Frame = 3
Query:  144 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 614
            MGV     E  S +P  +LFK +VL  D L+PKV PQV+ +VE + G+GGPG+IK   F EG  +K+ K RVD +D  N  YNYT IEG+  GD     ++ VS+E K+V  P GGS   +  KF+ K   E+  E++KG  E  + + +A+E+Y LA+
Sbjct:    1 MGVFNYEAETPSVIPAARLFKSYVLDGDKLIPKVAPQVISSVENVGGNGGPGTIKNITFAEGIPFKFVKERVDEVDNANFKYNYTVIEGDVLGD----KLEKVSHELKIVAAPGGGSIVKISSKFHAKGYHEVNAEKMKGAKEMAEKLLRAVESYLLAH 155          
BLAST of DY258237 vs. ExPASy Swiss-Prot
Match: MPAC1_CORAV (Major pollen allergen Cor a 1 isoforms 5, 6, 11 and 16 OS=Corylus avellana PE=1 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 1.215e-29
Identity = 69/159 (43.40%), Postives = 96/159 (60.38%), Query Frame = 3
Query:  144 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 614
            MGV    VE  S +P  +LFK +VL  D L+PKV PQ + +VE + G+GGPG+IK   F EG+ +KY K RVD +D  N  Y+YT IEG+  GD     ++ V +E K+V  P GGS   +  KF+ K   EI  E++KG  E  + + +A+E Y LA+
Sbjct:    1 MGVFNYEVETPSVIPAARLFKSYVLDGDKLIPKVAPQAITSVENVEGNGGPGTIKNITFGEGSRYKYVKERVDEVDNTNFTYSYTVIEGDVLGD----KLEKVCHELKIVAAPGGGSILKISSKFHAKGDHEINAEEMKGAKEMAEKLLRAVETYLLAH 155          
BLAST of DY258237 vs. ExPASy Swiss-Prot
Match: DRR4_PEA (Disease resistance response protein DRRG49-C OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.617e-29
Identity = 66/159 (41.51%), Postives = 98/159 (61.64%), Query Frame = 3
Query:  144 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 620
            MGV     E TS + P  L K  V   D L PKV+   +K++E++ G+GGPG+IKK  FVE  + KY  H+V+ +D  N   NY+ + G G  +  T++ +S+E+K+   P+GGS + + +K+Y K  A   EE++K G  K +GIFKALE Y +ANP+
Sbjct:    1 MGVFNFEEEATSIVAPATLHKALVTDADILTPKVI-DAIKSIEIVEGNGGPGTIKKLTFVEDGETKYVLHKVELVDDANWANNYSIVGGVGLPD--TVEKISFEAKLSAGPNGGSIAKLSVKYYTKGDAIPSEEEIKNGKAKGEGIFKALEGYCVANPD 156          
BLAST of DY258237 vs. ExPASy Swiss-Prot
Match: PR1_PHAVU (Pathogenesis-related protein 1 OS=Phaseolus vulgaris PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.940e-27
Identity = 61/158 (38.61%), Postives = 97/158 (61.39%), Query Frame = 3
Query:  144 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANP 617
            MGV T   + TS + P  L+K      DT+ PK LP   K+VE++ G+GGPG+IKK +FVE  + K+  H+++++D+ N  Y+Y+ + G   A   T + ++++SK+   P+GGS   + I ++ K  A   E+++K G  K   +FKA+EAY LANP
Sbjct:    1 MGVFTFEDQTTSPVAPATLYKAVAKDADTIFPKALPDSFKSVEIVEGNGGPGTIKKISFVEDGETKFVLHKIESIDEANLGYSYSIVGGV--ALPETAEKITFDSKLSDGPNGGSLIKLSITYHSKGDAPPNEDELKAGKAKSDSLFKAVEAYLLANP 156          
BLAST of DY258237 vs. ExPASy Swiss-Prot
Match: DRR3_PEA (Disease resistance response protein Pi49 OS=Pisum sativum GN=DRR49A PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.309e-27
Identity = 63/159 (39.62%), Postives = 98/159 (61.64%), Query Frame = 3
Query:  144 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 620
            MGV  +  E TS + P  L+K  V   D L PKV+   +K++E++ G+GG G+IKK  FVE  + K+  H+V+ +D  N  YNY+ + G G  +  T++ +S+E+K+   P+GGS + + +K++ K  A   EEQ+K    K  G+FKALE Y LA+P+
Sbjct:    1 MGVFNVEDEITSVVAPAILYKALVTDADNLTPKVI-DAIKSIEIVEGNGGAGTIKKLTFVEDGETKHVLHKVELVDVANLAYNYSIVGGVGFPD--TVEKISFEAKLSAGPNGGSIAKLSVKYFTKGDAAPSEEQLKTDKAKGDGLFKALEGYCLAHPD 156          
BLAST of DY258237 vs. ExPASy Swiss-Prot
Match: DRR1_PEA (Disease resistance response protein Pi176 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.322e-27
Identity = 65/160 (40.62%), Postives = 99/160 (61.88%), Query Frame = 3
Query:  144 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPK-PGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 620
            MGV  +  E TS + P  L+K  V   DTL PKV+   +K++E++ G+GG G+IKK  FVE  + K+  H+V+ +D  N  YNY+ + G G  +  T++ +S+E+K+   P+GGS + + +K+Y K   A   EEQ+K    K  G+FKALE Y LA+P+
Sbjct:    1 MGVFNVEDEITSVVAPAILYKALVTDADTLTPKVI-DAIKSIEIVEGNGGAGTIKKLTFVEDGETKHVLHKVELVDVANLAYNYSIVGGVGFPD--TVEKISFEAKLSAGPNGGSIAKLSVKYYTKGDAAAPTEEQLKSDKAKGDGLFKALERYCLAHPD 157          
BLAST of DY258237 vs. ExPASy Swiss-Prot
Match: IPRT1_CATRO (Probable intracellular pathogenesis-related protein T1 OS=Catharanthus roseus GN=PCKR3 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.644e-27
Identity = 68/160 (42.50%), Postives = 98/160 (61.25%), Query Frame = 3
Query:  144 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDG-GSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 620
            MGV++ ++E  S+L   KLFK FVL   TL+ K LP V+K+VE++ GDGG G+IK  +F EG      KH V+ LDK+N  Y Y+ ++GE  A +P +  +SY  K+   P G GS       F+ K G+ I E+++K G E+   + KA+EAY  ANP+
Sbjct:    1 MGVISYDMEIKSSLSAAKLFKAFVLDVGTLINKALPNVIKSVEILQGDGGAGTIKLVHFGEGGPVPSVKHHVEELDKDNMSYKYSIVDGE--ALMPGLQSISYVIKI--EPSGHGSVCKHNTTFHFKAGSNINEDEIKAGKERAAEMIKAVEAYVQANPD 156          
BLAST of DY258237 vs. ExPASy Swiss-Prot
Match: PR2_PETCR (Pathogenesis-related protein 2 OS=Petroselinum crispum GN=PR2 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.801e-26
Identity = 69/162 (42.59%), Postives = 101/162 (62.35%), Query Frame = 3
Query:  144 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGS--KSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 623
            MG +T +VE  S++P + ++K F+L  D ++PKVLPQ +K++E+ISGDGG G+IKK    E + +   K R+D +D E   Y+Y+ I  EGD  +  I+ ++ +  VV T DGG   K+T +  + P   A I EE VK   E+   +FKA+EAY LANP A
Sbjct:    1 MGAVTTDVEVASSVPAQTIYKGFLLDMDNIIPKVLPQAIKSIEIISGDGGAGTIKKVTLGEVSQFTVVKQRIDEIDAEALKYSYSII--EGDLLLGIIESITSKFTVVPT-DGGCIVKNTTI--YTPIGDAVIPEENVKEATEQSGMVFKAIEAYLLANPGA 157          
BLAST of DY258237 vs. ExPASy Swiss-Prot
Match: SAM22_SOYBN (Stress-induced protein SAM22 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.151e-26
Identity = 60/160 (37.50%), Postives = 99/160 (61.88%), Query Frame = 3
Query:  144 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIP-TIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 620
            MGV T   E  S + P  L+K  V   D ++PK L    K+VE + G+GGPG+IKK  F+E  + K+  H+++++D+ N  Y+Y+ +   G A +P T + ++++SK+V  P+GGS   + +K+  K  AE  ++++K G  K   +FKA+EAY LA+P+
Sbjct:    1 MGVFTFEDEINSPVAPATLYKALVTDADNVIPKALDSF-KSVENVEGNGGPGTIKKITFLEDGETKFVLHKIESIDEANLGYSYSVV---GGAALPDTAEKITFDSKLVAGPNGGSAGKLTVKYETKGDAEPNQDELKTGKAKADALFKAIEAYLLAHPD 156          
BLAST of DY258237 vs. ExPASy Swiss-Prot
Match: PR2_PHAVU (Pathogenesis-related protein 2 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.816e-25
Identity = 61/159 (38.36%), Postives = 97/159 (61.01%), Query Frame = 3
Query:  144 MGVLTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIP-TIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANP 617
            M V T   + TS + P  L+K  V   DT++PK +    K+VE++ G+GGPG+IKK +FVE  + K+  H+++ +D+ N  Y+Y+ +   G A +P T + +S +SK+   P+GGS   + IK++ K  A   E+++K G  K   +FK +EAY LANP
Sbjct:    1 MAVFTFEDQTTSPVAPATLYKALVKDADTIVPKAVDSF-KSVEIVEGNGGPGTIKKISFVEDGETKFVLHKIEEIDEANLGYSYSIV---GGAALPDTAEKISIDSKLSDGPNGGSVVKLSIKYHSKGDAPPNEDELKAGKAKSDALFKVIEAYLLANP 155          
The following BLAST results are available for this feature:
BLAST of DY258237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
MPAC1_CARBE5.454e-3043.40Major pollen allergen Car b 1 isoforms 1A and 1B O... [more]
MPAC1_CORAV1.215e-2943.40Major pollen allergen Cor a 1 isoforms 5, 6, 11 an... [more]
DRR4_PEA4.617e-2941.51Disease resistance response protein DRRG49-C OS=Pi... [more]
PR1_PHAVU1.940e-2738.61Pathogenesis-related protein 1 OS=Phaseolus vulgar... [more]
DRR3_PEA3.309e-2739.62Disease resistance response protein Pi49 OS=Pisum ... [more]
DRR1_PEA4.322e-2740.63Disease resistance response protein Pi176 OS=Pisum... [more]
IPRT1_CATRO5.644e-2742.50Probable intracellular pathogenesis-related protei... [more]
PR2_PETCR2.801e-2642.59Pathogenesis-related protein 2 OS=Petroselinum cri... [more]
SAM22_SOYBN8.151e-2637.50Stress-induced protein SAM22 OS=Glycine max PE=1 S... [more]
PR2_PHAVU1.816e-2538.36Pathogenesis-related protein 2 OS=Phaseolus vulgar... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3DA04ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258237 ID=DY258237; Name=DY258237; organism=Citrus clementina; type=EST; length=759bp
GGCATAGTTGTAGAGCTTGTCTTCTGAGTCTATAAATACCATTGCGCCTC
TGGCATCCACCATCACAATTCACTCAGAAAATTTCCCAATTTTAGTTGAT
CGGTAGTTTTCATCTTCTTTCTTTGTTTAACTCTTAGACAATCATGGGTG
TTCTCACGTTGAATGTAGAGGATACAAGCACTCTCCCCCCTGAAAAGTTG
TTCAAACTTTTTGTCCTTCAGTTCGACACCCTTCTGCCCAAAGTCCTGCC
TCAGGTTGTAAAGAACGTTGAATTGATTTCAGGGGATGGAGGCCCTGGAA
GCATCAAGAAGTTTAACTTTGTTGAAGGTGCTGATTGGAAGTACTTTAAG
CATAGGGTTGATGCATTGGACAAAGAGAACAAGATATACAATTACACGGC
AATTGAAGGTGAGGGTGATGCTAACATCCCTACTATTGATCATGTTTCTT
ATGAGAGTAAGGTTGTGGGCACCCCTGACGGAGGAAGCAAGAGCACCGTT
GTTATCAAGTTCTATCCCAAACCAGGTGCCGAGATTAAGGAAGAGCAGGT
TAAGGGAGGCTTGGAAAAGGAGAAGGGAATTTTTAAGGCTCTGGAAGCCT
ATGCCTTGGCAAACCCCAATGCCGTATAAGCTCTTACGTCAACACTTCAC
CGCACTTGCGTCGCCTTTGTTGCAACATTATGAATAATCATGTTTATGGC
TTCCGTATGTCGTGTCTCTTTGTTTTCAAATATGCCAATTTATATAATTG
GCTTTTGGC
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