DY258238

Overview
NameDY258238
Unique NameDY258238
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1206
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14350 contig Ccv1_Contig14350:325..1530. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258238 vs. ExPASy Swiss-Prot
Match: ADK_SCHCO (Adenosine kinase OS=Schizophyllum commune GN=ADK PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 5.981e-44
Identity = 94/258 (36.43%), Postives = 149/258 (57.75%), Query Frame = 1
Query:   22 PGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLAAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWET-DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVV---AQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYASHVIIQRSG 783
            P +  Y GC+G D   E++K  +K  G++  Y   +   TG CAV + G +RSLV  L AA  ++  HL       LV+  +++Y+ G+F+T    S   +A  +AA +K F++N +APFI +FF  A++++LPY+D +  NE+EA  ++   G     D+  +A  L+  PK +  R R  + T GA+  VV   A+ G+++ F V  L + ++VDTNGAGDAF GGFL  LV  + +++ V AG   + + IQ+ G
Sbjct:   76 PKSVVYTGCVGDDDLAEQLKAANKREGLDEAYLVKKGEKTGACAVIITGHDRSLVTTLRAAEKFEQSHLSSEAVAPLVDAVQFYYMEGYFVTHGLASALELAGKSAAKSKCFVLNFSAPFIPQFFMPAIQQLLPYVDIVIANESEAEAWASASGHPAPTDLAAVAKSLAMQPKTNPARPRVVIFTHGAEETVVVNSAEPGRVRTFKVDKLAEGEIVDTNGAGDAFAGGFLGALVAGRELDDSVEAGHKLAKISIQQIG 333          
BLAST of DY258238 vs. ExPASy Swiss-Prot
Match: ADK_TOXGO (Adenosine kinase OS=Toxoplasma gondii GN=AK PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 8.958e-32
Identity = 93/282 (32.98%), Postives = 143/282 (50.71%), Query Frame = 1
Query:    4 QWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWA-LVEKAKYFYIAGFFLTVSPDSIQLVAEHA-AANNKVFMMNLAAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI---------------RKRTAVITQGADPVVVAQ---DGKL--KKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYASHVIIQRSG 783
            Q +L+ PG+  Y+G IG D  G+ +K+     G+   +      STG CAV +   ER+L  +L A   ++      PE+W      A  FY   + LT +P +   VA +A    N +F +NL+APF  E +KDA++ +L + + +FGNE E    +KV        E+ AL  +    A E+                 +  V+T+G +PV+ A+   DG +   +  V V+  +K+VDTNGAGDAFVGGFL  L Q K +++C+  G   +  +IQ  G
Sbjct:   79 QKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSFRL-----PEDWTTFASGALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVA--AEKTALSTANKEHAVEVCTGALRLLTAGQNTGATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVG 353          
BLAST of DY258238 vs. ExPASy Swiss-Prot
Match: RBSK_HAEIN (Ribokinase OS=Haemophilus influenzae GN=rbsK PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.589e-12
Identity = 70/257 (27.24%), Postives = 117/257 (45.53%), Query Frame = 1
Query:   34 SYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESAS-TGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLAAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKR---TAVITQGADPVVVAQDGK---LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYASHVIIQRSG 783
            ++I CIG D  G+ MK      G++  +    S   TG   + V     + +   S AN + SE + + ++ A + ++    +    L      ++L A+ A  N    ++N A   I        +++L  +D I  NETEA   + V         E+A + S    AS    +   T +IT GA  V V++ GK   +K F V      + +DT  AGD F GGF++ L++EK  +E +R G  A+ + + + G
Sbjct:   57 AFISCIGSDSIGKTMKNAFAQEGIDTTHINTVSQEMTGMAFIQVAKSSENSIVLASGANSHLSEMVVR-QSEAQIAQSDCLLMQ---LETPLSGVELAAQIAKKNGVKVVLNPAPAQILS------DELLSLIDIITPNETEAEILTGV---------EVADEQSAVKAASVFHDKGIETVMITLGAKGVFVSRKGKSRIIKGFCV------QAIDTTAAGDTFNGGFVTALLEEKSFDEAIRFGQAAAAISVTKKG 288          
BLAST of DY258238 vs. ExPASy Swiss-Prot
Match: RBSK_LACLA (Ribokinase OS=Lactococcus lactis subsp. lactis GN=rbsK PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.996e-11
Identity = 66/254 (25.98%), Postives = 105/254 (41.34%), Query Frame = 1
Query:   22 PGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLAAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYASHVIIQRSG 783
            P   S IG +GKD FGE + +N K   V          +TG   + +   +  ++    A N     +L   + W  +++++   +        P    L        N + ++   AP      K  LE ++ ++DYI  NE E +       +    +EEI  K S             ++T G++ V+      L+K P I   K K+VDT GAGD F G F   L +   I + +R    ASH+ IQ+ G
Sbjct:   53 PNEVSMIGAVGKDAFGESILQNFKENAVLFENVGTVPQTTGIAQITLYDDDNRIIIIPGANNEVLPSYLA--DLWEKIKESQLVILQNEI----PHETNLAIAKFCKENAIKVLYNPAPAR----KTDLE-MIDFVDYITPNEHECKEL-----FPNLALEEILKKYSN----------RLIVTLGSEGVIFHDGETLQKIPAI---KAKVVDTTGAGDTFNGAFAFGLTENLSISDSIRLAVVASHLSIQKFG 277          
The following BLAST results are available for this feature:
BLAST of DY258238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ADK_SCHCO5.981e-4436.43Adenosine kinase OS=Schizophyllum commune GN=ADK P... [more]
ADK_TOXGO8.958e-3232.98Adenosine kinase OS=Toxoplasma gondii GN=AK PE=1 S... [more]
RBSK_HAEIN1.589e-1227.24Ribokinase OS=Haemophilus influenzae GN=rbsK PE=3 ... [more]
RBSK_LACLA2.996e-1125.98Ribokinase OS=Lactococcus lactis subsp. lactis GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3DA05ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258238 ID=DY258238; Name=DY258238; organism=Citrus clementina; type=EST; length=1206bp
GCGCAGTGGATGCTTCAAATTCCTGGTGCAACAAGCTACATTGGTTGCAT
TGGAAAAGACAAGTTTGGTGAGGAGATGAAAAAAAACTCAAAACTCGCTG
GGGTTAATGTTCACTATTATGAGGATGAATCTGCATCAACAGGAACTTGT
GCTGTCTGTGTTGTGGGTGGTGAAAGGTCACTAGTTGCAAATTTATCAGC
AGCAAATTGCTACAAATCTGAGCATCTGAAGAAACCAGAAAATTGGGCAT
TAGTTGAGAAGGCAAAGTACTTCTATATTGCTGGATTTTTTCTCACCGTA
TCTCCAGACTCCATACAACTAGTTGCTGAACATGCAGCTGCAAATAACAA
GGTCTTCATGATGAACCTTGCTGCTCCATTTATCTGTGAGTTCTTCAAGG
ATGCACTGGAGAAAGTTTTGCCGTATATGGATTACATCTTTGGAAATGAG
ACAGAAGCAAGAACCTTTTCAAAAGTCCAAGGCTGGGAGACTGATGATGT
CGAGGAAATAGCTCTGAAGCTTTCCCAATGGCCCAAAGCATCAGAAATAC
GCAAGAGGACTGCTGTCATTACCCAGGGCGCAGATCCTGTAGTTGTTGCT
CAGGATGGGAAGCTGAAGAAGTTCCCTGTAATAGTATTACCTAAAGACAA
ACTTGTCGATACCAATGGAGCAGGAGATGCATTTGTTGGAGGATTTCTGT
CGCAGTTGGTTCAGGAGAAGCCCATTGAAGAATGTGTGAGAGCTGGCTGT
TACGCGTCACATGTTATTATCCAAAGATCTGGTTGCACATACCCAGAGAA
GCCCGAATTCAACTAAGAGATATCTCTTTCTGTCAGTCCCAGTTGGTATC
TTAAACTTTGATTTTTCCGAACCCCGTCACCAGTATCTGATATTCGTATA
TTCAAATTGCTATCATAGCATTATTAAGGCCGTGCGCCAATAAAAGACCC
TCGGAAACTAATTTTTATTTTGTGAGGAATTTTATCCTCAAACCAAAAAA
CCGAAAAAAAGGAGGGGTGAATAACCCACATCATTACCTTCTATGACTTT
TTCTATAATAAAAAGAATCTAATAAAAAAATTACAAATTTACAGCCAAAA
TGGAATCTGTTACCATTAAGGACTTAATTTTTTCCATGGCTAACATAATT
GCGGGGTTATAAAAACCGGGGGGAAAGGTTTAATTTAAAAATAAATATTT
GTCCTT
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