DY258239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB1_STRAW (Chaperone protein clpB 1 OS=Streptomyces avermitilis GN=clpB1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.334e-23 Identity = 50/114 (43.86%), Postives = 79/114 (69.30%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFSNG 344 + R+ F+PEF+NR+D+ +VF L+R ++ I +LQ+DR+ +R+A R+++++VTDAA+ L G DP YG RP++R++Q + + LAK IL GE KD DT+ +D AF G Sbjct: 750 EVVRASFKPEFLNRLDDLVVFSALNRQELERIAKLQIDRLAQRLAQRRLRLEVTDAALAWLAEEGNDPAYGARPLRRLVQTAIGDRLAKEILAGEVKDGDTVRVD----AFGEG 859
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_XYLFA (Chaperone protein clpB OS=Xylella fastidiosa GN=clpB PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.048e-23 Identity = 48/107 (44.86%), Postives = 76/107 (71.03%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 323 + ++ FRPEF+NR+D+ +VF PLD+ QI I R+QL ++KR+A+ ++K+ + D A++LLG++G+DP YG RP+KR IQ +EN LA+ IL F DT+ + + Sbjct: 746 EVVQAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLQGLEKRLAESELKLDLDDRALELLGNVGFDPVYGARPLKRAIQSQLENPLAQQILAEAFVSGDTVQVGVD 852
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_VIBCH (Chaperone protein clpB OS=Vibrio cholerae GN=clpB PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.981e-23 Identity = 51/107 (47.66%), Postives = 73/107 (68.22%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 323 D FRPEF+NRVDE +VF PL ++ I SI +QL R+++R+A+R +++V D A+ L+ +G+DP YG RP+KR IQQ VEN LAK IL G+F I++ + Sbjct: 743 DVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILAGKFLPGSPILLSVK 849
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB1_ANASP (Chaperone protein clpB 1 OS=Anabaena sp. (strain PCC 7120) GN=clpB1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.981e-23 Identity = 54/112 (48.21%), Postives = 72/112 (64.29%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFS 338 DA RS FRPEF+NRVD+ I+F L R ++S I+R+QL RV+ + D+K+ +++ AA L GYDP YG RP+KR IQ+ +EN LA IL F DTI ID + S Sbjct: 753 DALRSHFRPEFLNRVDDTILFHALSRSEMSHIIRIQLKRVESLLRDQKISFEISPAACDFLVEKGYDPVYGARPLKRAIQREIENPLATKILENTFISGDTIYIDQDENGLS 864
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_VIBPA (Chaperone protein clpB OS=Vibrio parahaemolyticus GN=clpB PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.199e-23 Identity = 53/113 (46.90%), Postives = 75/113 (66.37%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEF---KDEDTIVIDTEVTA 332 D FRPEF+NRVDE +VF PL ++ I SI +QL+R+ KR+ ++ +++V+D A+ L+ +G+DP YG RP+KR IQQ VEN LAK IL GE K IV + ++ A Sbjct: 743 DVVSKHFRPEFLNRVDEIVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDKALDLIAQVGFDPVYGARPLKRAIQQNVENPLAKSILAGEIVPDKKVQLIVTNDQILA 855
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_RHOBA (Chaperone protein clpB OS=Rhodopirellula baltica GN=clpB PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 5.199e-23 Identity = 50/111 (45.05%), Postives = 75/111 (67.57%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAF 335 DA ++ F PEF+NR+D+ ++F PL + QI IV+LQL+ ++ R+A + ++TDAAI + +GYDP YG RP+KRVIQ+ V+N LA IL+ + + TI ID + F Sbjct: 767 DALKARFLPEFLNRIDDTVIFHPLQQTQIRRIVQLQLEELRSRLAANGLSFEITDAAIDQIAEVGYDPAYGARPLKRVIQREVQNPLASAILKNSYAEGTTIKIDHDGDQF 877
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_PROMM (Chaperone protein clpB OS=Prochlorococcus marinus (strain MIT 9313) GN=clpB PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.199e-23 Identity = 52/124 (41.94%), Postives = 81/124 (65.32%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFSNGQLPQQKLVFR 374 DA + FRPEF+NR+DE I+F L R+++ IV LQ++R+++R+ DRK+ ++++D A L + GYDP YG RP+KR IQ+ +E +AK IL G + D + +D +V Q++L FR Sbjct: 750 DALHAHFRPEFLNRLDETIIFHSLRREELRQIVALQVNRLRERLCDRKLGLEISDTAADWLANAGYDPVYGARPLKRAIQRELETPIAKSILAGLYGDSQIVHVDVDV--------DQERLSFR 865
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_PSEAE (Chaperone protein clpB OS=Pseudomonas aeruginosa GN=clpB PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.790e-23 Identity = 47/96 (48.96%), Postives = 75/96 (78.12%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEF 290 DA + FRPEF+NR+DE +VF+PL R+QI+ I +QL R++KR+A+R++ ++++ A+ L ++G+DP YG RP+KR IQ+++EN LA+ IL G+F Sbjct: 741 DAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLELSQEALDKLIAVGFDPVYGARPLKRAIQRWIENPLAQLILAGKF 836
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_BRAJA (Chaperone protein clpB OS=Bradyrhizobium japonicum GN=clpB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.868e-23 Identity = 54/116 (46.55%), Postives = 77/116 (66.38%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFS-NGQLPQ 356 R FRPEF+NRVDE I+F L R ++ IV +Q R+QK + DRK+ + + AA L + G+DP YG RP+KRVIQ+Y+++ LA+ IL G+ KD D + I +E + NG+ PQ Sbjct: 747 RGHFRPEFLNRVDEIILFHRLQRSEMGRIVEIQFARLQKLLTDRKIVLTLDGAARDWLAAKGWDPAYGARPLKRVIQRYLQDPLAEMILAGDVKDGDNVAISSEGNVLTFNGKAPQ 862
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_RHIME (Chaperone protein clpB OS=Rhizobium meliloti GN=clpB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.513e-22 Identity = 49/104 (47.12%), Postives = 74/104 (71.15%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVI 314 + R+ FRPEF+NRVDE I+F L R ++ +IV +QL+R++K ++DRK+ +++ D A L GYDP YG RP+KR IQ+YV++ LA+ +L+GEF D I + Sbjct: 745 EVVRAAFRPEFLNRVDEIILFHRLRRSEMGAIVDIQLERLRKLLSDRKITLELEDDARVFLADRGYDPAYGARPLKRAIQKYVQDPLAEKVLQGEFPDGSVIKV 848 The following BLAST results are available for this feature:
BLAST of DY258239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258239 ID=DY258239; Name=DY258239; organism=Citrus clementina; type=EST; length=587bpback to top |