DY258239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_LACPL (Chaperone protein clpB OS=Lactobacillus plantarum GN=clpB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.271e-17 Identity = 40/102 (39.22%), Postives = 65/102 (63.73%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 +S F+PEF+NR+D+ I+F PL I IV +DR+ R+ DR++ ++++D A + + GY+P YG RP++R I +VE LAK I+ G + T+ I+ Sbjct: 750 QSRFKPEFLNRIDDIIMFTPLQLGAIEEIVVKLIDRLSARLQDREITLKISDEAKKWIAKQGYEPAYGARPLRRFITNHVETPLAKEIIAGRVAPKSTVAIN 851
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPC_CHLTR (Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia trachomatis GN=clpC PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.240e-16 Identity = 41/144 (28.47%), Postives = 86/144 (59.72%), Query Frame = 3 Query: 6 AARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFSNGQLPQQKLVFRRLDTSSDASAADNQEAFSQTA 437 A + +PEF+NR+DE ++F+PL+++ +S I+ L+++++ R+ + +M + + D+ I L + G+ P G RP++RV++QY+E+ LA+ +L+ + E + +L ++++VF R + + A A + + TA Sbjct: 717 AVKKHLKPEFINRLDESVIFKPLEKEALSEIIHLEINKLGSRLQNYQMDLNIPDSVISFLVTKGHSPEMGARPLRRVVEQYLEDPLAEMLLKESCRQEARKL---------RARLTEERVVFEREEEAVSALAIEGDGSEPITA 851
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_CHLPN (Chaperone protein clpB OS=Chlamydia pneumoniae GN=clpB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.240e-16 Identity = 46/122 (37.70%), Postives = 76/122 (62.30%), Query Frame = 3 Query: 27 PEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFSNGQLPQQKLVFRRLDTSS 392 PEFMNR+DE + F PL ++ I IV +Q+ R+ +R+ R++ + D+ I L GYD +G RP+KR+IQQ V L+K +L+G+ K + +I E+T + ++ LVF++++T S Sbjct: 755 PEFMNRIDEILPFVPLTKEDIVKIVGIQMRRIAQRLKARRINLSWDDSVILFLSEQGYDSAFGARPLKRLIQQKVVILLSKALLKGDIKPDTSI----ELT------MAKEVLVFKKVETPS 866
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPC_STAES (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpC PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.620e-16 Identity = 41/108 (37.96%), Postives = 69/108 (63.89%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAF 335 ++ FRPEF+NRVD+ IVF L +D++ IV + ++++ R++++ + + VTD A + + GYDP YG RP+ R IQ+ VE+ L++ IL G + + ID + F Sbjct: 694 KNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKIEGKEVTIDHDGKEF 801
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPC_STAEQ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpC PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.620e-16 Identity = 41/108 (37.96%), Postives = 69/108 (63.89%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAF 335 ++ FRPEF+NRVD+ IVF L +D++ IV + ++++ R++++ + + VTD A + + GYDP YG RP+ R IQ+ VE+ L++ IL G + + ID + F Sbjct: 694 KNSFRPEFLNRVDDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNKIEGKEVTIDHDGKEF 801
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_CLOTE (Chaperone protein clpB OS=Clostridium tetani GN=clpB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.116e-16 Identity = 39/105 (37.14%), Postives = 69/105 (65.71%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 +A + F+PEF+NR+D+ I+F+PL +I+ I+ + L ++ R+ DR + + VT+ A +L+ GYD YG RP+KR I+ +E ++AK I++G+ + I +D Sbjct: 750 NALKDRFKPEFLNRLDDIIMFKPLTNREITKIIDIFLQDIENRLKDRNITLIVTENAKELMAKEGYDAIYGARPLKRYIENILETKIAKQIIKGDIYEGCKIGVD 854
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_CLOAB (Chaperone protein clpB OS=Clostridium acetobutylicum GN=clpB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.116e-16 Identity = 34/99 (34.34%), Postives = 66/99 (66.67%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 F+PEF+NR+D+ I+F+PL ++I I+ + L+ ++ ++ ++ +K+ + + A +++ GYDP YG RP+KR I+ +E +AK + GE + D + I+ Sbjct: 756 FKPEFLNRLDDIIMFKPLSINEIGKIIDIFLENIKSKLKEKNIKIDIAEEAKKIIAEEGYDPVYGARPLKRYIENTIETHIAKMFISGEISEGDILKIE 854
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPC_CHLMU (Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia muridarum GN=clpC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.763e-16 Identity = 42/144 (29.17%), Postives = 85/144 (59.03%), Query Frame = 3 Query: 6 AARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFSNGQLPQQKLVFRRLDTSSDASAADNQEAFSQTA 437 A + +PEF+NR+DE ++F+PL+++ +S I+ L+++++ R+ + +M + + D+ + L G+ P G RP++RV++QY+E+ LA+ +L+ + E + +L +++++F R D S A A + S TA Sbjct: 734 AVKKHLKPEFINRLDESVIFKPLEKEALSEIIHLEINKLGSRLQNHQMALNIPDSVVSFLVDKGHSPEMGARPLRRVVEQYLEDPLAEMLLKESCRQEARKLC---------ARLIEERVIFEREDEIS-ALAVEGDGPASVTA 867
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_PARUW (Chaperone protein clpB OS=Protochlamydia amoebophila (strain UWE25) GN=clpB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.763e-16 Identity = 42/101 (41.58%), Postives = 63/101 (62.38%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 323 FRPEF+NR+D+ + F PL + IV +QL+ + KR+ DR +++ T A+ L GYDP++G RP+KR IQQ V N+L+ IL G+ I ++ E Sbjct: 754 FRPEFINRLDDILPFVPLREHDMEKIVVIQLNLLAKRLKDRDVELMWTPQALAHLAKEGYDPHFGARPLKRYIQQEVINQLSTAILEGKIPPHSHIKLELE 854
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_CHLCV (Chaperone protein clpB OS=Chlamydophila caviae GN=clpB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.763e-16 Identity = 39/99 (39.39%), Postives = 65/99 (65.66%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTI 308 + F PEF+NR+D+ + F PL+ + I IV +Q+ RV +R+ +R++ + D+ I L GYD ++G RP+KR+IQQ V L+K +L+G+ K + +I Sbjct: 750 KKYFSPEFINRIDDILPFVPLNTEDIVKIVGIQMRRVAQRLLERRVTLTWDDSVILYLSEQGYDSSFGARPLKRLIQQKVVTLLSKALLKGDIKSDTSI 848 The following BLAST results are available for this feature:
BLAST of DY258239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258239 ID=DY258239; Name=DY258239; organism=Citrus clementina; type=EST; length=587bpback to top |