DY258239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_STAEQ (Chaperone protein clpB OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.827e-14 Identity = 33/105 (31.43%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 D+ + F+PE +NR+D+ ++F+PL + +S IV L ++ R+ D+ + ++VT+ A + LG Y+P +G RP+KR +Q+ +E +A+ +++ + I +D Sbjct: 749 DSLHAYFKPEILNRMDDIVLFKPLSVNDMSMIVDKILTQLNMRLLDQHISIEVTEEAKKWLGEEAYEPQFGARPLKRFVQRQIETPIARMMIKESLPEGTIIKVD 853
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_ENTFA (Chaperone protein clpB OS=Enterococcus faecalis GN=clpB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.283e-13 Identity = 35/98 (35.71%), Postives = 58/98 (59.18%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVI 314 F+PEF+NR+D+ I+F PL D + I+ ++ R+ +++ +++TD A + GY+P YG RP+KR I + VE LAK I+ G + + I Sbjct: 754 FKPEFLNRIDDTILFTPLSLDNVKGIIGKMTAQLAHRLEQQEIVLEITDEAKTWIAENGYEPAYGARPLKRFITREVETPLAKEIVSGRVMPKTKVTI 851
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: HLYB_TREHY (Hemolysin B OS=Treponema hyodysenteriae GN=tlyB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.734e-13 Identity = 33/99 (33.33%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 F PEF+NR+D+ IVF L ++ + I+ + L + + I +R + + +++ A + G+D YG R ++R IQ+ +E+ ++ IL G +D DTI +D Sbjct: 706 FNPEFLNRIDDIIVFHTLSKEDLKDIINIMLKELNEAIKERNIVINLSEEAKNYIIDKGFDKKYGARSLRRAIQKEIEDYVSTEILFGNIEDGDTINVD 804
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPC_ODOSI (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Odontella sinensis GN=clpC PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.877e-13 Identity = 35/89 (39.33%), Postives = 57/89 (64.04%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGIL 278 + FRPEF+NR+DE IVF L + I I L + ++QKR+ ++++ ++V + LL GYDP YG RP++R + + +E+ LA+ L Sbjct: 732 KEFFRPEFLNRIDEIIVFNHLTKYDIWEICGLMVKQLQKRLEEKELTLEVDVSVRNLLTEEGYDPVYGARPLRRAVMRLLEDTLAQQCL 820
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_MYCPE (Chaperone protein clpB OS=Mycoplasma penetrans GN=clpB PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.877e-13 Identity = 34/101 (33.66%), Postives = 58/101 (57.43%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGE-FKDEDTIV 311 ++ F+PEF+NR+DE I F + + I + LD ++KR+ D ++ + ++ + GY YG RP+ R IQ+ +EN + + IL+ E KD TI+ Sbjct: 592 KTSFKPEFLNRIDEIIKFNSITMEFAKEIAQKMLDDLEKRLKDNNYQITFDKSVVEYVAKNGYSKEYGARPINRFIQKTIENFITESILKNELIKDRSTII 692
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPE_LACLA (ATP-dependent Clp protease ATP-binding subunit clpE OS=Lactococcus lactis subsp. lactis GN=clpE PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.087e-12 Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAK-GILRGEFKDEDTIVIDTEVTAFSNGQ 347 F PEFMNR D I F L ++ + IV L LD V ++I + + VT AA + L LGY+P G RP++R IQ+ +E+ +A I E+K+ +ID ++ + Q Sbjct: 626 FSPEFMNRFDGIIEFSALSKENLLKIVDLMLDEVNEQIGRNDIHLSVTQAAKEKLVDLGYNPAMGARPLRRTIQENIEDSIADFYIEHPEYKELVADLIDDKIVISNQAQ 735
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_LEPIN (Chaperone protein clpB OS=Leptospira interrogans GN=clpB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.087e-12 Identity = 33/99 (33.33%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 F+PEF+NR+DE I+F + I I +QL+ ++++ + + + T+ + G+D YG RP+KR+IQ+ V N L++ IL G+F + + +D Sbjct: 752 FKPEFLNRIDEVILFHSITDSVIHKIADIQLEGLRQKAKENGLDVSFTNELKDYVSKAGFDAEYGARPLKRLIQREVGNALSRYILDGKFTNGQNVTVD 850
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_LEPIC (Chaperone protein clpB OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=clpB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.087e-12 Identity = 33/99 (33.33%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 F+PEF+NR+DE I+F + I I +QL+ ++++ + + + T+ + G+D YG RP+KR+IQ+ V N L++ IL G+F + + +D Sbjct: 752 FKPEFLNRIDEVILFHSITDSVIHKIADIQLEGLRQKAKENGLDVSFTNELKDYVSKAGFDAEYGARPLKRLIQREVGNALSRYILDGKFTNGQNVTVD 850
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_LACLM (Chaperone protein clpB OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpB PE=2 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 1.087e-12 Identity = 30/101 (29.70%), Postives = 64/101 (63.37%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVI 314 R+ F+PEF+NR+D+ I+F+PL + I +I+ ++ R+ + ++++++++ + Y+P YG RP+KR + + +EN LAK I+ G+ + +++ Sbjct: 751 RAHFKPEFLNRIDDTILFKPLALEDIKNIILKMTSQLAHRLEEMEVELELSEEVKVWIAENAYEPAYGARPLKRYLTKVIENPLAKLIIGGKIPPKSKVIV 851
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPE_LACLM (ATP-dependent Clp protease ATP-binding subunit clpE OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpE PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.419e-12 Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAK-GILRGEFKDEDTIVIDTEVTAFSNGQ 347 F PEFMNR D I F L ++ + IV L LD V ++I + + VT AA + L LGY+P G RP++R+IQ+ +E+ +A I E+K +ID ++ + Q Sbjct: 626 FSPEFMNRFDGIIEFSALSKENLLKIVDLMLDEVNEQIGRNDIHLSVTQAAKEKLVDLGYNPAMGARPLRRIIQENIEDSIADFYIEHPEYKQLVADLIDDKIVISNQTQ 735 The following BLAST results are available for this feature:
BLAST of DY258239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258239 ID=DY258239; Name=DY258239; organism=Citrus clementina; type=EST; length=587bpback to top |